Os05g0151300

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Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0151300| Description = Rubber elongation factor family protein| Version = NM_001061207.2 GI:297603853 GeneID:4337833| Length = 1725 bp| De...")
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Gene Name

Os05g0151300

Description

Rubber elongation factor family protein

Version

NM_001061207.2 GI:297603853 GeneID:4337833

Length

1725 bp

Definition

Oryza sativa Japonica Group Os05g0151300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2949020..2950744

Sequence Coding Region

2949213..2949668,2950246..2950509,2950627..2950668

Expression

GEO Profiles:Os05g0151300

Genome Context

<gbrowseImage1> name=NC_008398:2949020..2950744 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2949020..2950744 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgattcaggcagcgacgccccgatcagcaaccgccccgaggaggaggtgacggtggagaagacgccggagatggaggcggcggcggaggaggagaggctgaggtatctggagttcgtgcagcaggcggcggcgcaggtgctggtgctggcggcggcggcgtacgcgtacgccaagcagggcgccggcccgctccgccccggcgtcgaccacgtcgagggcaccgtcaaggccgtcgtcggccccgtctacgaccgcttccatggcgtccccctcgacctcctcaagttcctcgaccgcaaggttggtgagtccgtccaggagctggaccgccgcgtgccgccggtggtgaaggaggcgccgggcctggcccgctcggcggcggcggaggtgcggcaggcggggctcgtcggcacggcgacggggctggccaagtcggcgatcgcccgcgccgagcccagggcgcgggacctctacacccggtacgagcccgtggcggagcgcaaggcggcggaggcgtgggcggcgctgaaccgcctcccgctcgtgccgtcggtgacccgcgccgtgctccccgccgccgcgagcctctcggcgaggtacaacacggcagtggccgacggcgccaagcgcggcagcgccgtcgccacctacctcccgctcgtccccaccgagcgcctctccagggtgttcggctacccgctcgccgacgccgccacctcgccggcgccggagatgcagcccatcccgtcgcagtaa</cdnaseq>

Protein Sequence

<aaseq>MADSGSDAPISNRPEEEVTVEKTPEMEAAAEEERLRYLEFVQQA AAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRK VGESVQELDRRVPPVVKEAPGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLY TRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVAT YLPLVPTERLSRVFGYPLADAATSPAPEMQPIPSQ</aaseq>

Gene Sequence

<dnaseqindica>1077..1532#236..499#77..118#aagcaaaagaatccccaaattccaacaagaacaccttcgatttcgatccaccaatctaacacaacatccaatatccatggccgattcaggcagcgacgccccgatcagcaaccgccccgtaagaatctgctccaatttctctctctctctctctctctctctctctctctctctctcttttgagttcttggtggtggtggttgattgatttgtgtggtttggtttggttgagcaggaggaggaggtgacggtggagaagacgccggagatggaggcggcggcggaggaggagaggctgaggtatctggagttcgtgcagcaggcggcggcgcaggtgctggtgctggcggcggcggcgtacgcgtacgccaagcagggcgccggcccgctccgccccggcgtcgaccacgtcgagggcaccgtcaaggccgtcgtcggccccgtctacgaccgcttccatggcgtccccctcgacctcctcaagttcctcgaccgcaaggtagttaaatttaatttagggcatcattaaattcgcccgtcgaattttccaaattgaagacaaatttgcatatgggactaatctcagcatgttcatcttggtattattggttggtcatgttcaattcatcttggcttatcttgagaaagagagaaaaaaagaggatcagatgatgagttttcgctcttaaaatgggattaaaatcagttgggatgaaataattttatagctgtttgagtgaacgagttagttttgatggttttaagatagcacaagtacaacttaatcagttgaaatcaaactaattttatgaaattgatctcagcctgttcatcttactgatcgatcatgttcaattcatcttgattagtaccattttaaaaattaaatcatctttttagttctctatgatggatcaaatgatgcattcttgctctttaagtcttaagataagatgaaaatcagttgggtttaaactaattttcctagctgtttgaatgaactacatttggaaccttttttttttatgttgttgcaggaactgatggttttttcatgaactgtttctgttcgacaggttggtgagtccgtccaggagctggaccgccgcgtgccgccggtggtgaaggaggcgccgggcctggcccgctcggcggcggcggaggtgcggcaggcggggctcgtcggcacggcgacggggctggccaagtcggcgatcgcccgcgccgagcccagggcgcgggacctctacacccggtacgagcccgtggcggagcgcaaggcggcggaggcgtgggcggcgctgaaccgcctcccgctcgtgccgtcggtgacccgcgccgtgctccccgccgccgcgagcctctcggcgaggtacaacacggcagtggccgacggcgccaagcgcggcagcgccgtcgccacctacctcccgctcgtccccaccgagcgcctctccagggtgttcggctacccgctcgccgacgccgccacctcgccggcgccggagatgcagcccatcccgtcgcagtaagcccaccccacacgtattcttcaccgtgtgggtggccaaaatactacttagaacttagctttggatgaattatggaattattattatcttgtactattagtaatgtgtgatcgccttgttgggtcttgttaattgctgcaaattggtcgtgtaatccttgtgttatgtgaacaaccatatgtgtatttggtac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0151300, RefSeq:Os05g0151300