Os05g0151400

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Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0151400| Description = Chloroplast protein import component Toc86/159 family protein| Version = NM_001061208.1 GI:115462146 GeneID:4337834| ...")
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Gene Name

Os05g0151400

Description

Chloroplast protein import component Toc86/159 family protein

Version

NM_001061208.1 GI:115462146 GeneID:4337834

Length

4356 bp

Definition

Oryza sativa Japonica Group Os05g0151400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2951740..2956095

Sequence Coding Region

2951960..2955004,2955095..2955970

Expression

GEO Profiles:Os05g0151400

Genome Context

<gbrowseImage1> name=NC_008398:2951740..2956095 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:2951740..2956095 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccaccaccgacgccgacgccgctccggtcgcccccgtgctcgaggagaagccccccaccccgccgcctgacggcgacgaggtcccttctgctcctgcggcggcggcggcggcggagcaacccaaggtagtcgaggaggaggaggtgagattggaggggaaaggtggggggttcggtggccaggaggtggaggtggccggagacggggaagatggcggcgaggtggaggtggcggaggctaaggatgagggaggcggcggggagttcgccgggggagatgcgaaagctgcctcctcgttgttggcggcggcggcggaggaggaggaggaggaggaggcgagcaacggcgaattgggtgaggaggatgcttatccggcttcctccgatgccgcggtaggtgaggagaagggcgaattgggcgaggagccggaggagaaggctccggctctggctccggaggcgaatggcgccgccgaatcggatgtggaggagaagccggaggaggataacgagggggaggaggtggctactgggggtggggatgatggtgaattgggaatggagaaagaggttgatgtttctgctggggccgcggaggcgccgcagccggaggataaggtagctcctgaagctgaagctaatggagatttgggcgacaaggcggaggaggaagcgagtgcttcggcggcggtggaggtggtggaggagagcaatgctccagaagaattgttggagaaggctgtggtttcggaggcaaatggcgtggctgccgccgtcgaattggctgtggaggagaagctagaggataacaagggagaggaggaagaaatggaggcgaagcctgagccagtaagcggggtgattccagtggttgttgacgacactagctccgagatgattgcgcctgtgagtgccgaaagtgcagttgaagagagtactgagaaggagcaaactgttgacgacactagctccgagatgattgcgcatgtgagtgccgaaagtgcagttgaagagagtactgagaaggagcaaactgttgaaagcgaggccagtgaatctgtggagattgttggtgttgagaagcctactgaggatgagagtaatgttgatggcggtgctagttctgttgtgtctcgagaattggctccagaggaaaccaaggaaaataatgttggtcaggaggatgaaggtgttgctgaggttattgaccgtgaagaagacgctgatgatgatgaagagatagttttagctgcagctgatgatgaagatgatggtactaacgaggctgatgacgatgaagatggagtgagctctgacagggggcctgcacgagttgctattatagagagttcagaagctgcgaagcagatcatgaaggagcttggggaaggttctgctagtgttagtcctgtatctggcttgagcagctcgagagagtacactaatagcatggatgggcagattgtccttgatgattctgaggaggatggggatgatgacgataatgaagatgacgatgagaaggggtttgattctgctgccttggctgccctgctgaaagcagcaactggtgcatctgcagacgggaatgtcacagtttcttcccaagatggctctagaatcttctccatggatcggccagctggcctgggctcatcagccccatctctcaggccaacagtcccacgcccagttgcacggtcaaacctattcagcccctctgagctagcagtgactgctgagcctactgaggagatgacggaggaagagaagaagctgcatgacaaggttgagttgatccgagtaaagtttctgcgccttgtctatagattgggggctactcctgaagaaacagttgcagcacaggtgttgtaccgtctgagccttgctgagggtattcgacacggaaggcagacaaaccgagctttcagccttgacaatgcacggaagaaggccatgctgcttgaagcggagggaaaagaggagttgaacttctcatgcaacatacttgttttggggaagataggggtcggaaaaagtgcaactataaattcaatttttggtgaagagaagtccaaaactgatgctttcagttcagccaccaacagtgtacgggagattgttggtaatgtcgatggtgtccagatacggatcattgatactccaggccttcgacccaatgtgatggaccaaggatccaacagaaaaatcctcgcttctgtcaagaaatataccaagagatgccccccagatattgttctgtatgtggaccgcctggatagtctgagccgtgatctcaatgatttgcctcttctaaagaccattacttctgttctgggctcatctatatggttcaatgccattgttgctctcactcatgctgcttccgcccctcctgaaggtctaaatggtgcccctatgacatatgaggtgctaatggctcagaggtctcacattatccagcaatccatcaggcaagctgcaggagatatgcggttgatgaatccagtagctcttgttgagaaccatccttcttgcaggagaaaccgcgagggtcagaaagtacttccaaatggccagagctggaggcatcagatgctgcttttgtgctactcttcaaagatattgtctgaagcaaactcacttctgaaacttcaggatccaaatcctggaaagctttttgggttccgtttccgctctccgcctctgcccttcctgctctcctccctgttgcagtcaagagctcacccgaagctttcaccagatcagggtggcaatgaaggagattctgacatcgatttggatgattactctgatatagagcaggatgaagatgaagaggaatatgaccagcttcctcccttcaagccattgaccaaatctcagcttgcgaggctgacaaaggagcagaagaatgcttattttgatgagtacgactacagggtcaagcttctccagaagaaacagtggaaggatgagatccgcaggttgaaggagatgaagaagagaggtaaaactgatatggatgcttatgggtatgctaacatcgcaggagaaaatgatctggatcctcctccagagaacgtatcagttcccttacctgatatggtgctgcccccttcatttgactgtgacaatcccacataccggtaccgctttctggagccaacttcgactgttcttgcaaggcctgtgttagatgcacacgggtgggatcatgactgtggttatgacggagtaagtgttgaggagacgcttgctctccttaacaagtttccagctaatatggcggttcaggtcaccaaggacaagaaggaatttagcatccatttggactcttccatctcagcaaagcttggggaggatgcatcgtcgcttgctggttttgatatccagactgttgggcggcagcttgcgtacattctccgtggtgaaaccaagttcaagaatatcaagaagaacaagactactggaggattttcagtgactttcttgggcgacattgtggcgactgggctgaaggttgaggaccagctctctcttgggaagaggttggcactggtggcgagcacaggtgcaatgcgagctcaaggcgacaccgcttatggagctaacttggaggcacgcctgaaagacaaagattatccgattggccagtccctgtcaaccctgggtctttctttgatgaagtggcgccgagaccttgctctcggtgcgaatttgcagtcccagttctcgattggaaggggctcgaagatggtggttcgtcttggattgaataacaaactaagtggccagatcactgtcaggacaagcacctcggagcaggtccagatcgcgctgttgggtcttatcccagttgcagcctccatttacaggagcttcaggcccagcgaaccctccttcgcctattag</cdnaseq>

Protein Sequence

<aaseq>MASTTDADAAPVAPVLEEKPPTPPPDGDEVPSAPAAAAAAEQPK VVEEEEVRLEGKGGGFGGQEVEVAGDGEDGGEVEVAEAKDEGGGGEFAGGDAKAASSL LAAAAEEEEEEEASNGELGEEDAYPASSDAAVGEEKGELGEEPEEKAPALAPEANGAA ESDVEEKPEEDNEGEEVATGGGDDGELGMEKEVDVSAGAAEAPQPEDKVAPEAEANGD LGDKAEEEASASAAVEVVEESNAPEELLEKAVVSEANGVAAAVELAVEEKLEDNKGEE EEMEAKPEPVSGVIPVVVDDTSSEMIAPVSAESAVEESTEKEQTVDDTSSEMIAHVSA ESAVEESTEKEQTVESEASESVEIVGVEKPTEDESNVDGGASSVVSRELAPEETKENN VGQEDEGVAEVIDREEDADDDEEIVLAAADDEDDGTNEADDDEDGVSSDRGPARVAII ESSEAAKQIMKELGEGSASVSPVSGLSSSREYTNSMDGQIVLDDSEEDGDDDDNEDDD EKGFDSAALAALLKAATGASADGNVTVSSQDGSRIFSMDRPAGLGSSAPSLRPTVPRP VARSNLFSPSELAVTAEPTEEMTEEEKKLHDKVELIRVKFLRLVYRLGATPEETVAAQ VLYRLSLAEGIRHGRQTNRAFSLDNARKKAMLLEAEGKEELNFSCNILVLGKIGVGKS ATINSIFGEEKSKTDAFSSATNSVREIVGNVDGVQIRIIDTPGLRPNVMDQGSNRKIL ASVKKYTKRCPPDIVLYVDRLDSLSRDLNDLPLLKTITSVLGSSIWFNAIVALTHAAS APPEGLNGAPMTYEVLMAQRSHIIQQSIRQAAGDMRLMNPVALVENHPSCRRNREGQK VLPNGQSWRHQMLLLCYSSKILSEANSLLKLQDPNPGKLFGFRFRSPPLPFLLSSLLQ SRAHPKLSPDQGGNEGDSDIDLDDYSDIEQDEDEEEYDQLPPFKPLTKSQLARLTKEQ KNAYFDEYDYRVKLLQKKQWKDEIRRLKEMKKRGKTDMDAYGYANIAGENDLDPPPEN VSVPLPDMVLPPSFDCDNPTYRYRFLEPTSTVLARPVLDAHGWDHDCGYDGVSVEETL ALLNKFPANMAVQVTKDKKEFSIHLDSSISAKLGEDASSLAGFDIQTVGRQLAYILRG ETKFKNIKKNKTTGGFSVTFLGDIVATGLKVEDQLSLGKRLALVASTGAMRAQGDTAY GANLEARLKDKDYPIGQSLSTLGLSLMKWRRDLALGANLQSQFSIGRGSKMVVRLGLN NKLSGQITVRTSTSEQVQIALLGLIPVAASIYRSFRPSEPSFAY</aaseq>

Gene Sequence

<dnaseqindica>1092..4136#126..1001#agtactaattttgagcccaacctaaaaccctcaccttatcctctcctccgattcctcctcctcctgcttctcttctttgcttcgccttcgctttgcttgtggtggccggagcaacagccccggccatggcctccaccaccgacgccgacgccgctccggtcgcccccgtgctcgaggagaagccccccaccccgccgcctgacggcgacgaggtcccttctgctcctgcggcggcggcggcggcggagcaacccaaggtagtcgaggaggaggaggtgagattggaggggaaaggtggggggttcggtggccaggaggtggaggtggccggagacggggaagatggcggcgaggtggaggtggcggaggctaaggatgagggaggcggcggggagttcgccgggggagatgcgaaagctgcctcctcgttgttggcggcggcggcggaggaggaggaggaggaggaggcgagcaacggcgaattgggtgaggaggatgcttatccggcttcctccgatgccgcggtaggtgaggagaagggcgaattgggcgaggagccggaggagaaggctccggctctggctccggaggcgaatggcgccgccgaatcggatgtggaggagaagccggaggaggataacgagggggaggaggtggctactgggggtggggatgatggtgaattgggaatggagaaagaggttgatgtttctgctggggccgcggaggcgccgcagccggaggataaggtagctcctgaagctgaagctaatggagatttgggcgacaaggcggaggaggaagcgagtgcttcggcggcggtggaggtggtggaggagagcaatgctccagaagaattgttggagaaggctgtggtttcggaggcaaatggcgtggctgccgccgtcgaattggctgtggaggagaagctagaggataacaagggagaggaggaagaaatggaggcgaagcctgagccagtaagcggggtgattccagtggtaattgatcttgctcagtgtagttttttttgtttctaaatagttttgatacatacaaggatgttgaattattcgtatgaccgaatccaggttgttgacgacactagctccgagatgattgcgcctgtgagtgccgaaagtgcagttgaagagagtactgagaaggagcaaactgttgacgacactagctccgagatgattgcgcatgtgagtgccgaaagtgcagttgaagagagtactgagaaggagcaaactgttgaaagcgaggccagtgaatctgtggagattgttggtgttgagaagcctactgaggatgagagtaatgttgatggcggtgctagttctgttgtgtctcgagaattggctccagaggaaaccaaggaaaataatgttggtcaggaggatgaaggtgttgctgaggttattgaccgtgaagaagacgctgatgatgatgaagagatagttttagctgcagctgatgatgaagatgatggtactaacgaggctgatgacgatgaagatggagtgagctctgacagggggcctgcacgagttgctattatagagagttcagaagctgcgaagcagatcatgaaggagcttggggaaggttctgctagtgttagtcctgtatctggcttgagcagctcgagagagtacactaatagcatggatgggcagattgtccttgatgattctgaggaggatggggatgatgacgataatgaagatgacgatgagaaggggtttgattctgctgccttggctgccctgctgaaagcagcaactggtgcatctgcagacgggaatgtcacagtttcttcccaagatggctctagaatcttctccatggatcggccagctggcctgggctcatcagccccatctctcaggccaacagtcccacgcccagttgcacggtcaaacctattcagcccctctgagctagcagtgactgctgagcctactgaggagatgacggaggaagagaagaagctgcatgacaaggttgagttgatccgagtaaagtttctgcgccttgtctatagattgggggctactcctgaagaaacagttgcagcacaggtgttgtaccgtctgagccttgctgagggtattcgacacggaaggcagacaaaccgagctttcagccttgacaatgcacggaagaaggccatgctgcttgaagcggagggaaaagaggagttgaacttctcatgcaacatacttgttttggggaagataggggtcggaaaaagtgcaactataaattcaatttttggtgaagagaagtccaaaactgatgctttcagttcagccaccaacagtgtacgggagattgttggtaatgtcgatggtgtccagatacggatcattgatactccaggccttcgacccaatgtgatggaccaaggatccaacagaaaaatcctcgcttctgtcaagaaatataccaagagatgccccccagatattgttctgtatgtggaccgcctggatagtctgagccgtgatctcaatgatttgcctcttctaaagaccattacttctgttctgggctcatctatatggttcaatgccattgttgctctcactcatgctgcttccgcccctcctgaaggtctaaatggtgcccctatgacatatgaggtgctaatggctcagaggtctcacattatccagcaatccatcaggcaagctgcaggagatatgcggttgatgaatccagtagctcttgttgagaaccatccttcttgcaggagaaaccgcgagggtcagaaagtacttccaaatggccagagctggaggcatcagatgctgcttttgtgctactcttcaaagatattgtctgaagcaaactcacttctgaaacttcaggatccaaatcctggaaagctttttgggttccgtttccgctctccgcctctgcccttcctgctctcctccctgttgcagtcaagagctcacccgaagctttcaccagatcagggtggcaatgaaggagattctgacatcgatttggatgattactctgatatagagcaggatgaagatgaagaggaatatgaccagcttcctcccttcaagccattgaccaaatctcagcttgcgaggctgacaaaggagcagaagaatgcttattttgatgagtacgactacagggtcaagcttctccagaagaaacagtggaaggatgagatccgcaggttgaaggagatgaagaagagaggtaaaactgatatggatgcttatgggtatgctaacatcgcaggagaaaatgatctggatcctcctccagagaacgtatcagttcccttacctgatatggtgctgcccccttcatttgactgtgacaatcccacataccggtaccgctttctggagccaacttcgactgttcttgcaaggcctgtgttagatgcacacgggtgggatcatgactgtggttatgacggagtaagtgttgaggagacgcttgctctccttaacaagtttccagctaatatggcggttcaggtcaccaaggacaagaaggaatttagcatccatttggactcttccatctcagcaaagcttggggaggatgcatcgtcgcttgctggttttgatatccagactgttgggcggcagcttgcgtacattctccgtggtgaaaccaagttcaagaatatcaagaagaacaagactactggaggattttcagtgactttcttgggcgacattgtggcgactgggctgaaggttgaggaccagctctctcttgggaagaggttggcactggtggcgagcacaggtgcaatgcgagctcaaggcgacaccgcttatggagctaacttggaggcacgcctgaaagacaaagattatccgattggccagtccctgtcaaccctgggtctttctttgatgaagtggcgccgagaccttgctctcggtgcgaatttgcagtcccagttctcgattggaaggggctcgaagatggtggttcgtcttggattgaataacaaactaagtggccagatcactgtcaggacaagcacctcggagcaggtccagatcgcgctgttgggtcttatcccagttgcagcctccatttacaggagcttcaggcccagcgaaccctccttcgcctattagcttcgcatcaagatgaacaatttactcatgtcggctgcgcctcctttcgtcttagcaattttcctatcttatatgaaccataattttctgtctgtttttgcttttaccagtgtactccgaagatcgttcctatcataattttggctgaagagggttgtgaaatttaatgtggaacttcaactgaataatgttgttagatctatataccatccgtttttct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0151400, RefSeq:Os05g0151400