Os05g0155100

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Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0155100| Description = Similar to 60S ribosomal protein L18| Version = NM_001061223.1 GI:115462176 GeneID:4337849| Length = 2610 bp| Defin...")
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Gene Name

Os05g0155100

Description

Similar to 60S ribosomal protein L18

Version

NM_001061223.1 GI:115462176 GeneID:4337849

Length

2610 bp

Definition

Oryza sativa Japonica Group Os05g0155100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3208358..3210967

Sequence Coding Region

3208421..3208423,3208513..3208602,3208998..3209126,3209256..3209441,3210443..3210601

Expression

GEO Profiles:Os05g0155100

Genome Context

<gbrowseImage1> name=NC_008398:3208358..3210967 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3208358..3210967 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaagctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagaggctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcatggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggagaacacggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcctggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcgagaaggcccgtggcaggaggaacagccgtggattcaaggtctaa</cdnaseq>

Protein Sequence

<aaseq>MGIDLVAGGRNKKTKRTAPRSDDVYLKLLVKLYRFLVRRTKSNF NAVILKRLFMSKTNRPPLSLRRLAKFMEGKEENNIAVIVGTVTDDKRIQEIPKMKVTA LRFTETARARIVNAGGECLTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPH SHTKPYVRSKGRKFEKARGRRNSRGFKV</aaseq>

Gene Sequence

<dnaseqindica>64..66#156..245#641..769#899..1084#2086..2244#agccggaggccgacacgaggtaagaagcccagaagccctagcgccgccgcagcagcagcagccatggtgagctcgccgccgcccgccgaccctgttcgttccgtaggatttgtcttcccgctcgctgacgctgctgtttgtatgttgctccgcagggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaaggtacgccatgccgcgcccgcgcccgcgctgtcaccatatggtgctcgtgtttggtttggtagatctgtccgtgctcggttgcagaaatgtcctgtggtttttgttatctggttgctagttgctcgttttagctcaatctatggagaaatctaattgagaattggctcatcgattttagcgatacaaccatgtgatggtagcggagaacacggttgttcttgcagcttttgtttttcggttcttacggttagatgttgttttgtagggttagttattagttatcatgagatttttaggtgagtttgatgggttagagcggaaaatggattgtcattttttttatttgtgtggtacggttcatgttctgattagtgtttcctgcttgagtgttgtagctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagaggctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcatggaaggcaaggtgtgtgtctaaccatttctactgcctggtgctcgagcttgtaacattggttcccaagaaaatggcatacccatttgtttttttttgttgagttatgcatattcagcatgtaatcttctttgtgaacaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggagaacacggtatgctctccatgccattccttgttttcatatgtgttagctttgttcataactccatatattacattattttagggtgattcctctatgactgtttcgggtttgcgattgctctataaccttactgcaattcaagtagtgacacggtagatgttaatagacttcagttgtttctggatagacaaacattgcctactgatacaacatacttgtggatcatatgttgtctgggtctattttagctgtttggaaagagggtggaagtggtagtggttcctttgaataggcatgatttttatgtgatttatcaaatgtggcaatgcttagtttttgatgaaaaatctgatgtaaaaatgttttttttcccttttggagaagttattgtcaatatgttcgaacatgttcccttgttattttgctatctgttgggttcccagtgatggtttaaattaaccatgctaatactgatgtccattgacgagtaaaagtgttttactgagggaaccattttctatcttttttaaagttcaagaacattaattttctttgtttgttcatgtggaactgtatttacattttcttttggcgatgatgatactcttttacccagctcattatgagacttccctttgtgggttgtcttggatatgaacttttcctttgtatctgagcttacttgaaaatttctttgaatgttttcttttgattcaattctattaatatttattttagttggctcggtaaattaaatccatcttgggttatgttttcttctgcaatgatgatacctttttactcagctcattatgagacttccctttgtgggttgtttgggatatgaactttcccttatacctgagcagactggtgaattaacactgcatactgtaaatatggtacacatgatatataattgtggaaaagatgctgaagatgtcaacatgctaccatttgaacagttaatgaattgatttgacaatgattcttccaatttgttgcaggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcctggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcgagaaggcccgtggcaggaggaacagccgtggattcaaggtctaagtcagctcctgtttgcaagtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtcacttctctactgagactagcaaaacttaattgtgtcatttctgaaagatattttgaaggatcctttctacctacctacatgcgtttgtgggcaagaagacaatgttttttgtttcctctctattagagcttgaaaattttcgcctccattgctctcttggtgatagtgaagtcatgggctcatggcttgctgtcatggtgaaatgatggttcagctcatggctgatgtgcttgattatgtgggtttctgtgatgttattgcataagtcaatgcctgaagccactcaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0155100, RefSeq:Os05g0155100