Os05g0155300

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Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0155300| Description = Similar to HIRA interacting protein 5| Version = NM_001061225.1 GI:115462180 GeneID:4337851| Length = 3732 bp| Defi...")
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Gene Name

Os05g0155300

Description

Similar to HIRA interacting protein 5

Version

NM_001061225.1 GI:115462180 GeneID:4337851

Length

3732 bp

Definition

Oryza sativa Japonica Group Os05g0155300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3219390..3223121

Sequence Coding Region

3219454..3219652,3220018..3220179,3221163..3221338,3222215..3222318,3222404..3222515
,3222706..3222771

Expression

GEO Profiles:Os05g0155300

Genome Context

<gbrowseImage1> name=NC_008398:3219390..3223121 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3219390..3223121 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggcggagggtcgcggcgctcgcgtcccagctcctgcggaggcagctgctcatgcggagacccccgccgcggttcctctcatccgcggcggcggcggcttctggccccctcgaccgcctcaggtcgccgcccttcgcgcgcacggcggcgcggcacgggagccctgctctttccccatggagccgcttcggagggcagaagaggggcatgttcatccagacgcagtcgaccccgaacccgcagtcgctcatgttctatcctggaaagccggttatggaggttgggagctctgatttcccgaatgctcggaccgcgatgacatctcctttggccaaggcgctgtttgcaatcgacggagttaccagagtattctttggatccgattttgtaactgttacaaaatcagaggaaacttcttgggactatcttaagcctgaggtttttgctgtgataatggacttttactcatctgggcaatcactctttctggactcaagtactgcagcttctatggacaccgcaattcatgaggatgattcagaaatagttgcaatgataaaagagttgctggagactcgcattcgaccagctgttcaagatgatggtggtgacattgaatatcgaggatttgatccagaaacagggatagttaagctaaaaatgcaaggtgcctgcagtggatgtccaagttcgtcagtcacattgaagtctgggatagaaaacatgctcatgcattatgtccctgaggtgaaaggagtagagcaagaacttgatggtgacgaggaagctgaactgactggccagttggaatga</cdnaseq>

Protein Sequence

<aaseq>MARRRVAALASQLLRRQLLMRRPPPRFLSSAAAAASGPLDRLRS PPFARTAARHGSPALSPWSRFGGQKRGMFIQTQSTPNPQSLMFYPGKPVMEVGSSDFP NARTAMTSPLAKALFAIDGVTRVFFGSDFVTVTKSEETSWDYLKPEVFAVIMDFYSSG QSLFLDSSTAASMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGI VKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDGDEEAELTGQLE</aaseq>

Gene Sequence

<dnaseqindica>65..263#629..790#1774..1949#2826..2929#3015..3126#3317..3382#attggagacccagccttcctctcgccgccgccgacgccgacgacgaggagaggaggaggtggccatggcgaggcggagggtcgcggcgctcgcgtcccagctcctgcggaggcagctgctcatgcggagacccccgccgcggttcctctcatccgcggcggcggcggcttctggccccctcgaccgcctcaggtcgccgcccttcgcgcgcacggcggcgcggcacgggagccctgctctttccccatggagccgcttcggaggtcagggtctacctcttccttctttatttttttttctatcgtggaattcttcgttagggatgtgggatgattaaagatgcggatcttttttacccaactagtttagcgcaagatttgtgttcttgatcgaagtaacgatttgtttgcgtagcttgcttgatcatatttgcggtggattaggattgatgtttttaggacctgaggttatctagcctagttactgtcctgcaggattttagtacttcttttagatgacaggaaatgatgtgatggttttggtggctgaaatgggattttattttgaattctctgtctaatgcttgcttaactcatgtggttttgtttggaattgatgtgatgggcagggcagaagaggggcatgttcatccagacgcagtcgaccccgaacccgcagtcgctcatgttctatcctggaaagccggttatggaggttgggagctctgatttcccgaatgctcggaccgcgatgacatctcctttggccaaggcgctgtttgcaatcgacggtatttctttcctgttccgctagttacctgttggtgttaatcaattcaccatctcagcttccttgaatatctcggttatatgtttccttgtaaaatcctctggttgtcctcttaatatatatgattagttaccactcttactggccaactctttcaatgtatcgagtcttcctaggacactctttatacaaataagctatatcatcttccatttttggtacaaactataagtaactttattctgtgagttggtatttaactatattgtattccttctgtttaacttgtgttctatttgcctttttcagttcttgttgatattttgttattaaaacaaagttagctgttgtagataacttttgtgagatgcaactgaaatgtgccttacaaagcaatgtgcactgacatgggttaccaaaatgcttgcttaagtaaccaacgtagttgcttagagactccttaaaaatgtagttgcttagagcccagagccaagcaaacttggtcgtttaatgctagcattgagctgtgtaaatgataaagatgtggcaaaccatactgtgagaagatgacattggtggaattgtctgaaggcaaaagaaactcaaaccaaaagcaataatcttaatatctttaattctggatgaaatgatatatctgaagctgctggttgttaattcccataatgtttcacatttgctatgaacgtgcaacatttcgttgtttaatcatccaaaataacacaccaccacaagtgtttaaggcttagtggtatcatgatggcctgtaacacataattttatcctgccatgttttccattaactatataaagtacctttttgaagccataacagcaaaatcatgctaagagtcagaagatattctcgtagcagtaaatatttctagaacaacttcttcaaatttgtcatgagtgttcatttgttttatttactttgacattatgttgactggtgactacatgcaggagttaccagagtattctttggatccgattttgtaactgttacaaaatcagaggaaacttcttgggactatcttaagcctgaggtttttgctgtgataatggacttttactcatctgggcaatcactctttctggactcaagtactgcagcttctatggacaccgcaattcatgaggtatcccagacaactttagtgtagatcttacattccattagtataacttttagctgttcctagtgatactgcgcaaagtggccatctgtcagacccattgcagcatatgcattgtatttaggatactggtattaggtaagttctaattgtcagtgattagtaccaaaattatgacaggcagatctatcttttattatttgcgaatctgtgtctctatggataagttatattcagcagtaaacgaaaagtagcctaaaaaggattcaaatggagccctgattaccatttgatttggttctagggaaaattgcttatctgtttaaatttgaatgtgttcattgcacgtgtaactagtagttactgcttacatgtggtggtgttgtgatgatacaatatagatattcgctaagatatcttctaaagtgctcctgaataatgctgctaagttgatgaatatgtacttctaccaattattgaaatgttaatgctgtaaattcctcttgaaccaagaagttatgcaaggtagaagtaacatcacatattgttatcaattaaaaaactgttgtcatgttggtaagagtgtctgcttgagatgttaaggcagcgttcgttccagtaagtttgaggaagaaagcacatcgttttccgcgtgcacgcttcccaaactactaaatggtgcgttttttacaaaaattttctataggaaagttcttttaaaaaatcacattaatccatttttgaaatttaaaatagttaataatcaattaatcacgagctaatggctcacctcgttttgcgtatcttcctaatctcctcaatcccctcctcctcaaacacaccctaagtattttcacatatttttcctctatgccataggatgattcagaaatagttgcaatgataaaagagttgctggagactcgcattcgaccagctgttcaagatgatggtggtgacattgaatatcgaggatttgatccgttagtctatctctctcatgttcatgtgcagtgctgattttaagaattttaattgcatggtctcactatgatgatatcttttcagagaaacagggatagttaagctaaaaatgcaaggtgcctgcagtggatgtccaagttcgtcagtcacattgaagtctgggatagaaaacatgctcatgcattatgtccctgaggtatctcttctgtgctttatttctgtttcctcaaaacctccactccttttggctcattatataaggtgttttatctgataagtaaaatgttgaaagaagttgcaattcctattagtttgttcagactgcttaaagcagtaatttatcctttgatctagcgaaattttaatatttcacacttctttggcaggtgaaaggagtagagcaagaacttgatggtgacgaggaagctgaactgactggccagttggaatgacttttctttacggccaaatctcaacatcttcacatgtcgagggaaactttgcatcgttgtttgtgaaaatcaatccttcaaaaaccatagtcactttctttgttttgagatcaggactagttcaaagttttcaccacgaatagagagctgtaattttgaacctgatgtatgcaacagcgaagaagcatactttcatagattgtagaggcagcgttaactagcctacacaaatatcagttgcaatagggcttaaataaagtgatacagtgagttgatcactgcttttatctaatccttgtatatgccgagcctttcttatctaagcagagctgatcagtgattactacagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0155300, RefSeq:Os05g0155300