Os05g0156600

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Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0156600| Description = Similar to Tubulin gamma-1 chain (Gamma-1 tubulin)| Version = NM_001061233.1 GI:115462196 GeneID:4337861| Length = 4...")
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Gene Name

Os05g0156600

Description

Similar to Tubulin gamma-1 chain (Gamma-1 tubulin)

Version

NM_001061233.1 GI:115462196 GeneID:4337861

Length

4543 bp

Definition

Oryza sativa Japonica Group Os05g0156600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3286100..3290642

Sequence Coding Region

3286847..3286900,3286975..3287079,3287392..3287520,3287601..3287645,3287721..3287795
,3287962..3288066,3288156..3288209,3288412..3288812,3289025..3289136
,3289328..3289528,3290286..3290414

Expression

GEO Profiles:Os05g0156600

Genome Context

<gbrowseImage1> name=NC_008398:3286100..3290642 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3286100..3290642 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcgggagatcatcacgatacaggtggggcaatgcgggaaccagatcgggatggagttctggaagcagctctgcctcgagcacggcatcggcaaggacggcctcctcgaggacttcgccacccagggaggagataggaaggatgttttcttctaccaggctgatgaccagcattacataccgagggctcttcttgtggatctagagccgagagtgatcaacggaatacagaacagtgagtacaggaatctatacaatcatgagaatatatttgtggctgagcatggaggtggtgctgggaacaactgggctagtggatatcaccagggtgagcaagttgttgatgatatcatggatatgatagacagagaagcagatggaagtgatagccttgagggttttgtgttatgccactcaattgctggtggaactggttcaggtatgggttcttacctgttggagactctgaatgaccgatacagcaaaaagcttgtccagacatacagtgttttcccaaatcagatggaaacaagtgatgttgttgtccagccatataattcgcttttaactctgaagcggctgacactgaatgctgactgtgtggttgttcttgacaatacggcccttaataggattgctgtggaacgtcttcatttagcaaatcctacttttgcacaaacaaactctttggtctcaacagttatgtctgcaagcacaactactctgaggtatcctggatatatgaacaatgacctggttggccttcttgcctctttgatccctactccaaggtgtcattttctgatgacaggttacactccattgactgttgaacgacaggttaacatgatacgcaagacaacagtattagatgttatgaggcgacttctgcagaccaaaaatataatggtgtcatcatatgctcgaaataaggaagctagtcaggctaaatacatctccatacttaacatcattcagggagaggtggatcctacacaggtccatgagagcctacaaaggatacgtgaaaggaagcttgttaacttcattgagtggggacctgcaagcattcaggttgccttatcaagaaaatctccatatgtacaaaccacgcatagggttagtggattgatgctggcgaatcatactagtatccgtcacttattcagcaaatgcctgggacagtatgaaaagctaaggaaaaagcaagcttttcttgacaactacagaaagttcccaatgtttgaggacaatgatctctctgaatttgatgaatctcgagaaataatagagagcttagttgatgagtacaaggcttgcgaatcaccagactacatcaaatgggggatggaggatgctggagaggcaaacgttgcggccgcacttgattcgaagttagtggtgtaa</cdnaseq>

Protein Sequence

<aaseq>MPREIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQG GDRKDVFFYQADDQHYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGN NWASGYHQGEQVVDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDR YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERL HLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPL TVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQ VHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFSK CLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYKACESPDYIKWG MEDAGEANVAAALDSKLVV</aaseq>

Gene Sequence

<dnaseqindica>3743..3796#3564..3668#3123..3251#2998..3042#2848..2922#2577..2681#2434..2487#1831..2231#1507..1618#1115..1315#229..357#gctcacaaatctccgcttcgtcccccacccacccaccactccactccccgcagttggtggcccgcggcggcgcaagccctagcgtccacgcgaagcaaaccccccaaaaccctagctccgccgccgtcggcggcgcccgagctgcaacccccgccacgacgccatccgggtggctagcctaagcccctaaccaaaccctagcgaccggcgccgcagtcggggggagagatgccgcgggagatcatcacgatacaggtggggcaatgcgggaaccagatcgggatggagttctggaagcagctctgcctcgagcacggcatcggcaaggacggcctcctcgaggacttcgccacccaggttgccccccccccccccccccctgtctctgctcctccttccctccctcccccacgccgcgggaacactccggatcggcggtgtggttggtctgatccgtgtgggttacaagatttctccatgttccgcatcagaaatgggcgcgcttctctttttgtttaggtctaagggtttagtggagtgaagtgtgtgtgggttttgggcttgcagatgcttggagcgctatgtctagtgtttttttttacaagtaatttagtagtacacttgaacaccggcacgtttgaactggcaccagcattttgttggcattggggattgctcatttccaagtgtaagaatgaggcgtgattggggcatacttgcaacataggaatttcatgggaaacaattcatttccataggaactagagggaattcaactgttccgcgcaggtcctgttgtttaagagttcagtgtttcaacttttaaatgccttttgatactggaagcaggggaataaatagatcccagttaactgaattacgacttaaagtgccaaattcgatgaatggttcaatctcaatctgactccttgttgctctgagaagtgcagctacgatctaaatgcacagcctaaatacaatagcatccaaatattatgtttcttttcgtatcatctagaacggttacaatgtctatcattcatttcaatgcatattttcctttgttggtagctatgttaaccaaagagtgctaaagactcaagtttctctgcagggaggagataggaaggatgttttcttctaccaggctgatgaccagcattacataccgagggctcttcttgtggatctagagccgagagtgatcaacggaatacagaacagtgagtacaggaatctatacaatcatgagaatatatttgtggctgagcatggaggtggtgctgggaacaactgggctagtggatatcaccaggtatactttgatctgtcttatccatatttcatctgctacactgctaatcaattctgtaggtttgtcagccgatcaccaatgctataggttttgttatattctgtcattagatcaattgtgcctgtgtttcttcagtcagagtttaatatatctttcacattaatgttttttttcctatttacacactatagggtgagcaagttgttgatgatatcatggatatgatagacagagaagcagatggaagtgatagccttgagggttttgtgttatgccactcaattgctggtggaactggttcaggtcatttatctcgatctcctttcttggtttcattcatttgtcttagttttctgtaaatcaccatctattgtaactggagcgtatattggtgttttaacatgtggcttagtgtgtatatgggatgctgtagttgcaatatggaaaagtagtatttccacatgtcagttttcttacaatagttatctaattttgttcactcttccctcatttaggtatgggttcttacctgttggagactctgaatgaccgatacagcaaaaagcttgtccagacatacagtgttttcccaaatcagatggaaacaagtgatgttgttgtccagccatataattcgcttttaactctgaagcggctgacactgaatgctgactgtgtggttgttcttgacaatacggcccttaataggattgctgtggaacgtcttcatttagcaaatcctacttttgcacaaacaaactctttggtctcaacagttatgtctgcaagcacaactactctgaggtatcctggatatatgaacaatgacctggttggccttcttgcctctttgatccctactccaaggtgtcattttctgatgacaggttacactccattgactgttgaacgacaggtgatttgatcatatttgttgcattggttcatgtaacatttgatttcacattttatctgtttagtaactacttttcttgagtttagtttgggggttggtagactagtatatactatgtcaaatacatattactttccctgccttcttttgtgacaaatggggaaaaattcagttcatgatataatgatatgctcaattgcaggttaacatgatacgcaagacaacagtattagatgttatgaggcgacttctgcaggtattctttgcttccttaggaataggatgcttgccactttatgatctttatgaaatttaaattttggacctttatttgttgtcttgcagaccaaaaatataatggtgtcatcatatgctcgaaataaggaagctagtcaggctaaatacatctccatacttaacatcattcagggagaggtggatcctacacaggtaaagttctgttaaatgggtttattagtttagctttatccatagcagctggaatattgaaatgaaatttgcctagttctgaagcagaatgaagatctcgttcttctgatcctttggaattgcttgttcattccattcttatcttttggtattctcatgcatttaggtccatgagagcctacaaaggatacgtgaaaggaagcttgttaacttcattgagtggggacctgcaagcattcaggtcattatacaactagaataattttaggttaaacctttttgacatattgatttattgttatttcaactgccacaggttgccttatcaagaaaatctccatatgtacaaaccacgcatagggtacctttctctcactctctcactatctttttttttgtcaattcaagtgcaatgtttgaatcactaatgtttgtctacaggttagtggattgatgctggcgaatcatactagtatccgtcacttattcagcaaatgcctgggacagtatgaaaagctaaggaaaaagcaagcttttcttgacaactacagaaagttcccaatgtttgaggtaagaaactctattccttcaatttcatccattttcattacctgagtaatttccaaatttgaagtttctggttaaactaggtatgtttgaagtgctacaatgtaattccctgttcaaaacctgtttgacaccaacaattttgaacattccactagcaattttacattaaagtataaaacaaacatgaactgtagcactataagtttcttgtttttcttgaagtgaaatgctttcagtactatatatgatcttgtgaggaaacctgtccattattctgtccaaaatactcaacgttttggcctctctatacaggacaatgatctctctgaatttgatgaatctcgagaaataatagagagcttagttgatgagtacaaggcttgcgaatcaccagactacatcaaatgggggatggaggtacgtctttgctccatttcagtatatttgttatttactttatgtgaaatgctgagcaatctgttggaaaataggatgctggagaggcaaacgttgcggccgcacttgattcgaagttagtggtgtaaatatgaaggtaacgcattggactccattcctgatatagcttgctgtacgggtacctggaacctttgttgaactttttggagaaatattttgtacatggccttgatgagcacattattctcctaaagaagtgcatttattttatcagcagtccttgtgttgtggagagttggagatattatggtgttaaattaggtgtatcgacagtgacactactaaattcgttactcctttgattttcactctgttagctactcccccgtcccaatatagttgtccttttatgttgtttagcatagattaagtttaagaataaaagacagtaatgtcccttattaaatgatgtatgcttgtgagtagaattttgaaacctggaatttaggacgaaggggttataatattgtcttttaaacctcttgtcatgagctatgacttgtacatgcaggtcctacaagaatgcaactctaattgcctgatggtcatcagttcgatggcagctgctcgactcgttcccactctagtgctagatgcgtttcctcagcattcttcaagtttgcttctcgtgttagtgttacagcctgtgcgacatgagtgtatatcttgacccacttcgaactggccgtagtttgtgctgttccgttttgggttgcaatcccttctgggatgctttgtatgtgtggatgcgtgtgatgtactgatactgatgggttttgtgccagaatagcatgcagagctctaattgttggtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0156600, RefSeq:Os05g0156600