Os05g0158400

From RiceWiki
Revision as of 10:07, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0158400| Description = Peptidase, trypsin-like serine and cysteine domain containing protein| Version = NM_001061244.1 GI:115462218 GeneID:4...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0158400

Description

Peptidase, trypsin-like serine and cysteine domain containing protein

Version

NM_001061244.1 GI:115462218 GeneID:4337872

Length

3766 bp

Definition

Oryza sativa Japonica Group Os05g0158400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3412515..3416280

Sequence Coding Region

3412611..3412977,3413074..3413211,3413519..3413643,3414218..3414487,3414567..3414697
,3415447..3415654,3415743..3415808,3415898..3415975,3416072..3416080

Expression

GEO Profiles:Os05g0158400

Genome Context

<gbrowseImage1> name=NC_008398:3412515..3416280 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:3412515..3416280 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccccccaaatcgtcgccggcgatgtcggcacggtcgaaatcaacgccggattccgatctccgctcgcacgacggcattcccaatcccggatcgtggtcggggaggttgactcgctcccgagcaaagcagattggactggttcttccgattcaggcggtggaatcgccgggaatctcttccaacaacaacaagaagagaaggatcgaggaggagacggcgggggagtcgcgggcgacagtgattccgacgacgacgacgacgggggagcctggtaccttggcacgccggccgatccacccgccgcagccgcactccaccgcaccgcgcatcggcagagaaagctcctggatcgcccagcgcaaagttgatcgacttcggaaggcaactctccgggatgcggaagacgagccctccaccgcggccgccatgcccaccccctctgacaagaagatggtgttgggcatgtctcgctcaatcgtccgtgtttcatctccaccgactgagggaaaatttatctctcctctcaccggcaccgtcatcagttgggatggagccaccaagcgtgctatgatcctcacgatctactccactgacttcaagagtaagccgcatgagccccaacccgagctatgggttcatctcccagataagtctatcgtgcagggacggttgatattcgtgaatcgccactacagtcttgccatcttggagatcacgtctgacctaccattgcaggtccccacttttgggtcagcagcaaagtatggccaagaaattcttgccttgtctcgggatgaaaatatgtccctggtggcgaggcgtggagcaatcacctggtcggatggttctttgatgtggagaaaccattacatgtttctggattgtgatgttcctgagggtggtgaaggagggcctgtggttgactactgtggtagtatcattgctgtagtatacagagacggcccttgtgcagcaatcatttcaatctcaattattcatgccttgtatgagatgtgggagcaatttagctgtgttgcccgccctgtgtttgacatggatttaaaaagtgtggaactagctagtttctcactccgggaggagctctctctgaaacataacatcgaaggtggctttattgttgaacacatagccaatgattctgctcttgaaaatctcggtgttagacggggtgacgtgatcttttttgaggataagtgcgggactatgttgcctgagatagaagattatctccttcatcttggtcggagatacctgggtgagaagaggtcgatggttctcaagttggaagtacatgacattgaaggtacatgcaaggagacaattaccttacccttagaatttaaagtcagctcaggaaaggttgcctga</cdnaseq>

Protein Sequence

<aaseq>MPPKSSPAMSARSKSTPDSDLRSHDGIPNPGSWSGRLTRSRAKQ IGLVLPIQAVESPGISSNNNKKRRIEEETAGESRATVIPTTTTTGEPGTLARRPIHPP QPHSTAPRIGRESSWIAQRKVDRLRKATLRDAEDEPSTAAAMPTPSDKKMVLGMSRSI VRVSSPPTEGKFISPLTGTVISWDGATKRAMILTIYSTDFKSKPHEPQPELWVHLPDK SIVQGRLIFVNRHYSLAILEITSDLPLQVPTFGSAAKYGQEILALSRDENMSLVARRG AITWSDGSLMWRNHYMFLDCDVPEGGEGGPVVDYCGSIIAVVYRDGPCAAIISISIIH ALYEMWEQFSCVARPVFDMDLKSVELASFSLREELSLKHNIEGGFIVEHIANDSALEN LGVRRGDVIFFEDKCGTMLPEIEDYLLHLGRRYLGEKRSMVLKLEVHDIEGTCKETIT LPLEFKVSSGKVA</aaseq>

Gene Sequence

<dnaseqindica>97..463#560..697#1005..1129#1704..1973#2053..2183#2933..3140#3229..3294#3384..3461#3558..3566#aagattgaaatatacttcgcatttttctagtagctaaaaagtgaagaaaaaaaaaacgcgcggcggcggcggcgattggtgcggcgggaggcggacatgccccccaaatcgtcgccggcgatgtcggcacggtcgaaatcaacgccggattccgatctccgctcgcacgacggcattcccaatcccggatcgtggtcggggaggttgactcgctcccgagcaaagcagattggactggttcttccgattcaggcggtggaatcgccgggaatctcttccaacaacaacaagaagagaaggatcgaggaggagacggcgggggagtcgcgggcgacagtgattccgacgacgacgacgacgggggagcctggtaccttggcacgccggccgatccacccgccgcagccgcactccaccgcaccgcgcatcggcagagaaagctcctggatcgcccagcgcaaaggttttcttgagctttcgatccatccatccccaccactgtttcttccccaatttttttgagtacctatattttttttctcttcttcatcttcttcagttgatcgacttcggaaggcaactctccgggatgcggaagacgagccctccaccgcggccgccatgcccaccccctctgacaagaagatggtgttgggcatgtctcgctcaatcgtccgtgtttcatctccaccgactggtaattaacatctacttctaattcaactgagtcaacccactttactgtctgatagattgatcgatctacttatgcagtcaaaatcagaaaattattgctgctctctactcccatggtaaccatggatgtagtgctaatctagtcatcgatcaaacttaattagctgtaggcgagatagacaatgtctagttcgaattgcaacgaaagggaaaatatgtatttagtagtagcccgatacaaaatatgaatttatatcaacttctagctatgtatgtagctacctgctaatcaaccggatgtttttcagagggaaaatttatctctcctctcaccggcaccgtcatcagttgggatggagccaccaagcgtgctatgatcctcacgatctactccactgacttcaagagtaagccgcatgagccccaacccgaggtgcaggcttcttttcctgcagcttctgtatatatatactgtggcttctatatgtgtgtaatctgttattattaaccatcatgttcaattcagtttctataaatgactcttacaatgcctgtatatttctttaaatttcttggggcatgtgcaggacaccgatttccattagctaatccccatgtttctatcatccgagttccattattgttcttgttaagtaggggcaaacccaattgctaaaaatgactcttcatgcctgccagtttctttaatttcttggtccaagtgtagaacaccgatttccattagctaatccccatgtttctatcatccgagttccattgccatttttattaagtatggtcaagtaattgctaacggtagctgggctgccgtgcatttgctttgtgcgaactttactcagccctctgatttcaattctcaaacattttcattgtcaggccttttcttgtatatccttagtattaattctgtttcttgtgcttaaaatgagtaacaatatggcattaaccttttttttctcccattgcctgctctctctatctttcagctatgggttcatctcccagataagtctatcgtgcagggacggttgatattcgtgaatcgccactacagtcttgccatcttggagatcacgtctgacctaccattgcaggtccccacttttgggtcagcagcaaagtatggccaagaaattcttgccttgtctcgggatgaaaatatgtccctggtggcgaggcgtggagcaatcacctggtcggatggttctttgatgtggagaaaccattacatgtttctggattgtgatgttcctgaggtaaataccttttcttcacacttgctatttattttaccttctacttagtggtatttatttatttttttaattaatgcagggtggtgaaggagggcctgtggttgactactgtggtagtatcattgctgtagtatacagagacggcccttgtgcagcaatcatttcaatctcaattattcatgccttgtatgagatgtgggagcaatttaggtatatactctttctccatcagtattaaatttctttattccatcagtactaaaatgtaccgccgtttgaatcaaaatcgaagaaattaacttcattacgataatattgtatgtttaaatgccaaaagaaaattggaagcaaggattatgttgcaaccattgaaaaatatttggataaaaccactacactacatacgggtatagtagtagcctgtatgaagaaaacaataaacagggaactagatgagcagtgtaagtagtagcatgtaatttcactacaaaatgatggatagaaattggcaatctaagacatttgttttaggatatgtatttcctcctaatacagattatgttatgtacatgtgaaactatctatattatggaaatggcactaactttttagatgtcattttcccataatatcgtcttgagcaatttctcaaagttaaaaagtttatctagcacgtaaacccactaatcacgatatattcttattagttttatggataaatcttttatatctatgttattagcggttcgaaaaagcaaatgctggaaagtaatccatgattaaaaaatacctaaaatcaattaaaattaagtcttaaaattcaatttgctaaataatatacaagggctataaagtggtcggcgcaccaacatgcgcactcattttctactaatagagtaaatccatcttatcactagcactcattttcttctaatagactaaatccatcttatttgtagctgtgttgcccgccctgtgtttgacatggatttaaaaagtgtggaactagctagtttctcactccgggaggagctctctctgaaacataacatcgaaggtggctttattgttgaacacatagccaatgattctgctcttgaaaatctcggtgttagacggggtgacgtgatcttttttgaggataagtgcgggactatgttgcctgaggtgaaatgaattcttgtctcaagtaatcaatattatgcaagaataatacaaatgtgttgtgatttctatttttaaaattcgtgaacagatagaagattatctccttcatcttggtcggagatacctgggtgagaagaggtcgatggttctcaaggtctgatattatataataacaaaaaatattacttatttattttacaaaattggggaaaaataattagcaaaattacttttcttgtgtagttggaagtacatgacattgaaggtacatgcaaggagacaattaccttacccttagaatttaaagtcagctcaggaaaggtaaacttctctaaactattgtacaattgttctactttgcttgttttaatacctagattttaccccttaagcagcgataaatgtgttgaattttaggttgcctgacggaggatggcttgaggatgtacagcaagactgaagttacctggagaggataatttagtgaatgttatgtaattcgagtgttctttgacttgatgacttctgtcggggcgtttaacctaggatgttacctaattttggctgaactgctaatattcatatgaacgactgtcatatatattcagcccgattggtcctttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0158400, RefSeq:Os05g0158400