Os05g0168400

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0168400| Description = Conserved hypothetical protein| Version = NM_001061289.1 GI:115462308 GeneID:4337923| Length = 3301 bp| Definition ...")
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Gene Name

Os05g0168400

Description

Conserved hypothetical protein

Version

NM_001061289.1 GI:115462308 GeneID:4337923

Length

3301 bp

Definition

Oryza sativa Japonica Group Os05g0168400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4080656..4083956

Sequence Coding Region

4080709..4080852,4080961..4081023,4081130..4081185,4081623..4081716,4081801..4081861
,4082608..4082689,4082798..4082853,4083041..4083104,4083424..4083487

Expression

GEO Profiles:Os05g0168400

Genome Context

<gbrowseImage1> name=NC_008398:4080656..4083956 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4080656..4083956 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcccgccggagccccgccgcggcccaccaccgcctcttcctcctcctcctcctcttctcggccctcctcgcccccctcgcgtccgcctaccgccccggcgacatcgtccccatgctccgctccggccagtaccacggctcgaggtcggtgtggttcgatgtggtgggacgccactgcccgtccttcgcggtcaaccatgaggttatgatgccgatccccaagccgactgggttcaccggtgcagatccttacaagataacatttcaaattggtcacgaaaagttccaccttccttggctttatgtcataaatcgcaaaagctctgaagttccaatgattgatttccatttgaaatactctggaaatgatttacttggtgtcacagctaaagtagtggacatgcctcacatttatgttgaacatcatcctgacataaggaagaatttctgggatcaacagaattggccaaaatatgttctggtcagatatacatgggaggagcaatcggagatagatgttcctggaggtttctatgtgttgtttggatctgggcttgttctatccttcatccttgcaatctacgtcctgcaatcatctcaggaaaagttgacaagatttgtgcgagaagcagttaatgacagtagtctaccggaaggagggtttgcaaaggttgagtga</cdnaseq>

Protein Sequence

<aaseq>MAARRSPAAAHHRLFLLLLLFSALLAPLASAYRPGDIVPMLRSG QYHGSRSVWFDVVGRHCPSFAVNHEVMMPIPKPTGFTGADPYKITFQIGHEKFHLPWL YVINRKSSEVPMIDFHLKYSGNDLLGVTAKVVDMPHIYVEHHPDIRKNFWDQQNWPKY VLVRYTWEEQSEIDVPGGFYVLFGSGLVLSFILAIYVLQSSQEKLTRFVREAVNDSSL PEGGFAKVE</aaseq>

Gene Sequence

<dnaseqindica>54..197#306..368#475..530#968..1061#1146..1206#1953..2034#2143..2198#2386..2449#2769..2832#atttaccccgaatctcaccctccacccccaactccggcgaccacctcgccgccatggccgcccgccggagccccgccgcggcccaccaccgcctcttcctcctcctcctcctcttctcggccctcctcgcccccctcgcgtccgcctaccgccccggcgacatcgtccccatgctccgctccggccagtaccacggcgtaagtgagcaaagccgcttagccttcggattctgaggctgatttgcgttgttcttcggcgcgatctgatctgcgaggtggggtttttctttttttgtttgtttgcagtcgaggtcggtgtggttcgatgtggtgggacgccactgcccgtccttcgcggtcaaccatgaggtgagatgggggtgtgttcttggaaagagaggggtcgagatctctgattcgtttcatgtgtgtgggggagtggttttggtgatttgggttggtctctcttgtgcaggttatgatgccgatccccaagccgactgggttcaccggtgcagatccttacaagatgtgagtaagatgttctgctgttgttcatgttttagacggaaaatttacacttctgttctatacaattttgagtagaacagtgagttcagtaagctgtagggcatgactttgaaggttatcatcataatcggtgatgattttgtgacaccagaatcttgtgactgaaatcataaattgttaaaactttttcttgttatttttcatttttgagagagagaattcagaaggtatggtgttctgcatagtttgtgctaggttataatactcattgtaaggttaagacgaactgacttttagttcaattgactgttgtagagaactaaaagagtaaatggtagtaaggttggaaatgttatgaacatatgagatttacaacctgtatatgagtgtgtttctggagatgtgttttgcaatcttacctgattctgacactgtagaacatttcaaattggtcacgaaaagttccaccttccttggctttatgtcataaatcgcaaaagctctgaagttccaatgattgatttccatttggtgagtccttgcttaatagtttctatatacctttccagcaagacttgtctctgtgcttaatttgatctacctttgattacgcagaaatactctggaaatgatttacttggtgtcacagctaaagtagtggacatgcctcacatttgtatgtattgttatcacatgtcctcgtgatatatctttttgcatatgtctaaacttatataattctatcatatttagtattgttattatttctcatgcaagcagtaccatgtacacatttgtatgtattgttatcacctgtcctcgtgatatatctttttgcatatgtctaaacttatataattctatcatatttagtattgttattatttctcatgcaagcagtaccatgtacacatatgtttgccaaatagtaacaaaacatttcatgtgtagcagcgcttcattaataagttatgttctttgcatgtctgttttcctgaacgtagttcgtttatataaacccattatgagcattgtttttcagttcaggggaatctttaaagatttatcttagtgtagtcaagtagtcaactttgtttacctttcggtagtgaactaatggtgagctcatagagcagcccttttgggagttatcagcaaatgctcatgacttctctctctctctctctctctctctctctctctctctctctctctctcaataccgcagcaatattcgggccttgtataagggcacatagcatatgttgtaaatttccaatagactagactttttcaaggatagctatcatttttagagtggtttttctttcacctagtaaattatttttattcacaggctgattttgttgttttgtttctcgatttccctaattgctaaccaatgctcattttgttatccagatgttgaacatcatcctgacataaggaagaatttctgggatcaacagaattggccaaaatatgttctggtcagatatacatggtaaaaacttactttgtaatttaaaattttactatgacctttcaaaaagatctttaccataacaaactagggtgaaattgattcaaggacttgaaatgattcattcagggaggagcaatcggagatagatgttcctggaggtttctatgtgttgtttggatctggtgagttcgttttaactcaaatagcatttgtttgccatgctatactactcttgcgatttcccttatatcatgaacggaacatttatgttctgatgccatctatgctgatatagcaaagtgtgatagttttctagttctaatggctttcacatttgtgtcctaaaatagcttctttttatatatgcagggcttgttctatccttcatccttgcaatctacgtcctgcaatcatctcaggaaaagttgacaaggtttgtttttcacctttcagttagttttctgtatataggctgagactgaactattcacggctacgtagaacaaaaataatgagaattcattaattttttgcatcctgcatgcttttggttttgtaggttgaacactgacccaatttctataaatcatcttttaaagctgtattgatcataatcatgctagcttagttacctggagatgtactgctctctcccattttggtcgcaacattaaagaataatagtggcgttggatggattaattcaattggaactgatccgtgttatttgacgctaccattttgctttgtagatttgtgcgagaagcagttaatgacagtagtctaccggaaggagggtttgcaaaggttgagtgatctttctacaaggagctggaaaattatacactagtctgtccattgatcagaaaactgtcagtagataccgagttgtcagtcaaatttcatgggcgagctttcaacttcaaacaagagccagtggattgtcttgtataaatacatacattgcaaacgatttagctattatgacatgaaaagaggaaagagaaatggacattaggttttcccttggcagaatggtatttttagcaaactattgtccgactgtcactaactcacttcagttgatgtattgcgtgatgattttgtctgatgcattttttttgtgtgtgtttttatgcttcttgtggaaatcttcatccttgaaaaaaccaacaacttctcggtttttctaggatggaggaggtatgtattaaactgctatggcgcattgctttctgcttgtaagaatcactatgtcaagttaatcaagtttggtcatcctgat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0168400, RefSeq:Os05g0168400