Os05g0169300

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0169300| Description = Allinase, C-terminal domain containing protein| Version = NM_001061296.1 GI:115462322 GeneID:4337930| Length = 2954 ...")
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Gene Name

Os05g0169300

Description

Allinase, C-terminal domain containing protein

Version

NM_001061296.1 GI:115462322 GeneID:4337930

Length

2954 bp

Definition

Oryza sativa Japonica Group Os05g0169300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4132290..4135243

Sequence Coding Region

4132349..4132587,4132778..4133084,4133988..4134265,4134351..4134667,4134764..4134948

Expression

GEO Profiles:Os05g0169300

Genome Context

<gbrowseImage1> name=NC_008398:4132290..4135243 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4132290..4135243 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgatgggcagcaaggatggcggcggcggcggtggcgggatggcggcgcaggctgggaggctcggggtggtcgcctccgtggcgttcaacctcgccgcgctcgcgttctacctccgccggagatacttcggcggtgacgacgccgccgcggtgaggaagaaggcggaggcggaggtcgcgccgtcctccgggaagccgccggtgaccaaggactcaatcatcaacctcgaccacggcgacccgacgatgtacgaggcgttctggcgcggcggcgccggggagagggcgacgatcgtgatcccggggtggcagacgatgagctacttctccgacgtgggcagcctgtgctggttcctggagcccgggttggagcgggaggtgcgccgcctccaccgcctcgtcggcaacgccgtcgccgacggctaccacgtgctcgtcggcaccggatccacccagctcttccaggccgcgctctacgccctctcgccgccgggcccctccgcccccatgaacgtcgtctcccccgcaccatactactcctcgtacccggcggtgacggatttcctcaagtcggggctgtacaggtgggccggcgacgccaagatgttcgacggcgacacctacgtcgagctcgtctgctcgccgagcaacccggacggcggcatccgcgaggccgtgctcaagtccggcgacggcgtcgccgtccacgacctcgcctactactggccgcagtacacccccatcaccagcgccgccgcccatgacatcatgctcttcaccgtctccaagtgcaccggccacgccggcacccgcctcgggtgggcgctggtgaaggacagggcggtggcgcagaagatgagcaagttcatcgagctcaacaccatcggcgtctccaaggactcgcagctccgcgccgccaagatcctcaaggccatcaccgacggctacgaccgcgcgcccgccgccggcgacgacgacgacgactcgagccgactgttccacttcgcccgccgcaagatggtctctcgctgggccaagctccgcgccgccgtcgccgcctccggcatcttcaccctccccgacgagctccccggccactgcaccttcgccaacgagaccgtctccgcctaccccccgttcgcgtggctgcgctgcgggaaggaaggggtggacgacctggaggggtacctgcgcgagcgcaagatcatcagccgcggcggcggcaagttcggcgccgacgggagggtggtcaggatcagcatgctcgacaccgacgaggcgttcgccatcttcgtcgaccgcctcgccgccatgaactga</cdnaseq>

Protein Sequence

<aaseq>MAAMGSKDGGGGGGGMAAQAGRLGVVASVAFNLAALAFYLRRRY FGGDDAAAVRKKAEAEVAPSSGKPPVTKDSIINLDHGDPTMYEAFWRGGAGERATIVI PGWQTMSYFSDVGSLCWFLEPGLEREVRRLHRLVGNAVADGYHVLVGTGSTQLFQAAL YALSPPGPSAPMNVVSPAPYYSSYPAVTDFLKSGLYRWAGDAKMFDGDTYVELVCSPS NPDGGIREAVLKSGDGVAVHDLAYYWPQYTPITSAAAHDIMLFTVSKCTGHAGTRLGW ALVKDRAVAQKMSKFIELNTIGVSKDSQLRAAKILKAITDGYDRAPAAGDDDDDSSRL FHFARRKMVSRWAKLRAAVAASGIFTLPDELPGHCTFANETVSAYPPFAWLRCGKEGV DDLEGYLRERKIISRGGGKFGADGRVVRISMLDTDEAFAIFVDRLAAMN</aaseq>

Gene Sequence

<dnaseqindica>60..298#489..795#1699..1976#2062..2378#2475..2659#ccaaccacttcccctatctataaatagagaggagaagggagagtgagtgtgagttggtcatggcggcgatgggcagcaaggatggcggcggcggcggtggcgggatggcggcgcaggctgggaggctcggggtggtcgcctccgtggcgttcaacctcgccgcgctcgcgttctacctccgccggagatacttcggcggtgacgacgccgccgcggtgaggaagaaggcggaggcggaggtcgcgccgtcctccgggaagccgccggtgaccaaggactcaatcatcaacctcgaccagtaagtgttctcgtctgatccgccgccggtggatcgatggatcgatcgatcgatctcgaccacctgttcgtccatgcatggcactgtacacgtgacgcctcgcgtcgcgacgcggcgcggcgtggcgcggcgtggcgtggcgagtgagttttgttccgatcttgatctctttgtggtgatggcggcgcagcggcgacccgacgatgtacgaggcgttctggcgcggcggcgccggggagagggcgacgatcgtgatcccggggtggcagacgatgagctacttctccgacgtgggcagcctgtgctggttcctggagcccgggttggagcgggaggtgcgccgcctccaccgcctcgtcggcaacgccgtcgccgacggctaccacgtgctcgtcggcaccggatccacccagctcttccaggccgcgctctacgccctctcgccgccgggcccctccgcccccatgaacgtcgtctcccccgcaccatactactccgtaatttatcaatccgatttcatcacttgcaatcaaatttgttttttccttttccagatgagaaattttacagttcttgaaaaatgtagttttatcatttttggaaaagtacttggagatgccatgttttctagtggtatcttcatccttgaaaaaggtagtttttcgttttctcattagaaattttagtgtccttgagaaaggtagatttatttaatatctttaagaaagtacatggaggtgccaagttttattttataaaacttggtaccaaaattcttatttctagtgtaaaacttaggtactacgaggtattttctcagtatccgtaaaatttcttcctcgagaaagtgtcttgagatacctaaatttcacattaaaagttttgagaagtacctaattaaatttcacattaaaaattgataagtacaaatataagttttatgctagtaaatgtgatacctctaactacattctcaaatatagtaaaattactcttttctgattgatcttgatagggaaactattctaaactctcgagaggtgacattctctcatagttcgcatatcatctaagttgttgcgattttttttaaaagaaatacatcaacaagatagactgatattaccaactcgaaatgatagaaatggtaaagttaaatactccctccgtttcacaatgtaagtcattctaacatttcctacattcatattgatgttaatgaatctagacatatatctatctagaaggaagtatgaatgttaatgaactgtgggaaatattagaatgacttacattgtaaaacggaggaagtacgattgatcttgacatgatttaatctttatttttgtttgacacaatatatcttttgtgttgtgtggatgcggcgtggcggggcgcagtcgtacccggcggtgacggatttcctcaagtcggggctgtacaggtgggccggcgacgccaagatgttcgacggcgacacctacgtcgagctcgtctgctcgccgagcaacccggacggcggcatccgcgaggccgtgctcaagtccggcgacggcgtcgccgtccacgacctcgcctactactggccgcagtacacccccatcaccagcgccgccgcccatgacatcatgctcttcaccgtctccaagtgcaccggccacgccggcacccgcctcgggtacgtacacacaaatttcatcgtacgaatacttttgaaattcgaacaaattttggctcaatgtgattggctttttttggcacaggtgggcgctggtgaaggacagggcggtggcgcagaagatgagcaagttcatcgagctcaacaccatcggcgtctccaaggactcgcagctccgcgccgccaagatcctcaaggccatcaccgacggctacgaccgcgcgcccgccgccggcgacgacgacgacgactcgagccgactgttccacttcgcccgccgcaagatggtctctcgctgggccaagctccgcgccgccgtcgccgcctccggcatcttcaccctccccgacgagctccccggccactgcaccttcgccaacgagaccgtctccgcctacccccgtacggacacacacacgaagctcgatcgcatcgccattgctgacatgtttgtgttcgatcgatcgccattgatgatgtgatttgatttgggtgcagcgttcgcgtggctgcgctgcgggaaggaaggggtggacgacctggaggggtacctgcgcgagcgcaagatcatcagccgcggcggcggcaagttcggcgccgacgggagggtggtcaggatcagcatgctcgacaccgacgaggcgttcgccatcttcgtcgaccgcctcgccgccatgaactgatcggtcgatcgagcgagcgagctcgccccagctagggcttgatcttgaatcttgatcgatgtcgacgatgagatggtcagttaagttgcgaggattaagatcaagcttaattagttatcgtcgtcgtctttggttgcttcatcaagttcggttctagatatcgatctggggtgcatgcatggtaatgtgctttggttaatattagtccaaaactctatataattttggatcgactcttaaaatttcgatgttgtgttgtgagactttaatttgtgagtttgtggctggttggata</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0169300, RefSeq:Os05g0169300