Os05g0170200

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Revision as of 10:08, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0170200| Description = Conserved hypothetical protein| Version = NM_001061302.1 GI:115462334 GeneID:4337936| Length = 2084 bp| Definition ...")
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Gene Name

Os05g0170200

Description

Conserved hypothetical protein

Version

NM_001061302.1 GI:115462334 GeneID:4337936

Length

2084 bp

Definition

Oryza sativa Japonica Group Os05g0170200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4184995..4187078

Sequence Coding Region

4185024..4185292,4185841..4185950,4186072..4186188,4186831..4187018

Expression

GEO Profiles:Os05g0170200

Genome Context

<gbrowseImage1> name=NC_008398:4184995..4187078 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:4184995..4187078 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caaccagctgagaggttaattaattatgatttgtatgagagatcgatcgagaagaggagtagcgagggagaggatggcggcggtgagcgtgggcggcggcgggaggaacatcggggtggcgatggacttctcggcgtgcagcaaggcggcgctgcggtgggcggcggcgagcctggcacgccccggcgaccggctggtgcttgtccacgtcaagccctcgttccagtacgagcagggcgtcgcccacctctgggagcagcaaggctcaccgatgatcccgctggtggagctggccgacccgcgggtgagcaggatctacggcgtcgcgccggacgcggagacgatcggaatcctcaccagcgccgccaaccagaaaggggtggaggtggtggcgaaggtgtactggggcgagccggcgaagaagctgacggaggcggcgcaggggattcccctgcactggctcgtcgtcgggaacagaggcctcggcgccgtcaagagggttctgatggggagcgtgagcacgtacgtcgccaaccacgccacctgccccgtcaccgtcgtcagggagaacctgccgcctccgccgccgccgccgcagccaccgcagcccgtcgcaacggcggcgagctactactgatggctgatcagctgcgatttccccacgtatgtctcggtcagctgtaa</cdnaseq>

Protein Sequence

<aaseq>QPAERLINYDLYERSIEKRSSEGEDGGGERGRRREEHRGGDGLL GVQQGGAAVGGGEPGTPRRPAGACPRQALVPVRAGRRPPLGAARLTDDPAGGAGRPAG EQDLRRRAGRGDDRNPHQRRQPERGGGGGEGVLGRAGEEADGGGAGDSPALARRREQR PRRRQEGSDGEREHVRRQPRHLPRHRRQGEPAASAAAAAATAARRNGGELLLMADQLR FPHVCLGQL</aaseq>

Gene Sequence

<dnaseqindica>30..298#847..956#1078..1194#1837..2024#gcaacgacacctgcaggctagctagctaacaaccagctgagaggttaattaattatgatttgtatgagagatcgatcgagaagaggagtagcgagggagaggatggcggcggtgagcgtgggcggcggcgggaggaacatcggggtggcgatggacttctcggcgtgcagcaaggcggcgctgcggtgggcggcggcgagcctggcacgccccggcgaccggctggtgcttgtccacgtcaagccctcgttccagtacgagcagggcgtcgcccacctctgggagcagcaaggctcacgtaagcttactgctaccactgtcctatactacctccgtcccaaatatgggtaaccgtggatatccgcgtctagtatttaactgtctgttttatttaaaaaagaattatgaattttttttaaaaaaatactattcatattttatcatctaataacaataaaaatacaaattaaagatttttcaaataagacgaacggtcaaacgtcatgaacagggtaaaactatacttattttgagatggaaggagtattataaattgctttaattttttttatagctaatttttaaaacatttgattaagtttatatataaaaaaaatactaacatacgaaacaaacgtatcactaaaacatatttaatggaactaatttagtgctatagatatagcaatatattttttttataaacttagttaaatccaataattaattagaaacaaatttaaaacgactttgtaataccaaacggagagagagcagagagagggagtatttaatttctttcttctagcgcgtgctaatggcgattcctcaccggccggagtgcagcgatgatcccgctggtggagctggccgacccgcgggtgagcaggatctacggcgtcgcgccggacgcggagacgatcggaatcctcaccagcgccgccaaccagaaaggggtatatatactgaatggtttactgttcgatcgtctgttaatccttgtgtggtagtagtatatattgaatgcccattggtgatcgatcgatgatcactggagaaatgaatggatggatgcaggtggaggtggtggcgaaggtgtactggggcgagccggcgaagaagctgacggaggcggcgcaggggattcccctgcactggctcgtcgtcgggaacagaggcctcggcgccgtcaagaggcaagcacatccatgcatctctatctctctctgtatggtggtgtttgtttctattaaagagaagataaaattaggacataaaaaatgaaaatatattagcgtataattaattaagttttagttattatatattttaaaattgaatttatctaatattttaaatcaacttttttatataaaaagttttcaactagagtatttagcaagttaaaaggtgtgttagcggaaacttaattaggaaataatgggacatatatctatcatgagtatcaatcatctcatgatagtacctactccttccgtttctaaatatttgacaccgttaaatttttttaaatatgtttgaccattcatcttatttaaaaaaaataagtaattattaattcttttcctatcatttgattaattgttaaatatacttatatgtatacatataattttacatattgtattttacaaaagtttttgaataagacgaacggttaaacatgtgctaaaatattaacaatgtcaaatatttagaaatggaggaagtactactaataaagtactagtacgtagccgatcggtaagctgaattacacggcgaggaatttgtttaatttgtttggttaattaatttgttgcttgatatatatgtagggttctgatggggagcgtgagcacgtacgtcgccaaccacgccacctgccccgtcaccgtcgtcagggagaacctgccgcctccgccgccgccgccgcagccaccgcagcccgtcgcaacggcggcgagctactactgatggctgatcagctgcgatttccccacgtatgtctcggtcagctgtaaagtcggttgctgtgtgactgggagtctgggactgtctctgcttgactgcttgtgcatagt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0170200, RefSeq:Os05g0170200