Os05g0187500

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Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0187500| Description = IQ calmodulin-binding region domain containing protein| Version = NM_001061371.1 GI:115462472 GeneID:4338011| Length...")
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Gene Name

Os05g0187500

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001061371.1 GI:115462472 GeneID:4338011

Length

1580 bp

Definition

Oryza sativa Japonica Group Os05g0187500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5347177..5348756

Sequence Coding Region

5347177..5347620,5347707..5348756

Expression

GEO Profiles:Os05g0187500

Genome Context

<gbrowseImage1> name=NC_008398:5347177..5348756 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:5347177..5348756 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaaggcggcgcggtggttccgcaacatgtggggaggagggaggaaggagcagaagggcgaggcgccggcgagtggggggaagaggtggagcttcgggaagtcgtcgagggactcggcggaggccgcggcggctgctgctgcggcggcggcggaggcttccgggggcaatgcggcgatcgccagggcggccgaggcggcgtggctcaggtcggtgtacgccgacacggagcgggagcagagcaagcacgccatcgccgtcgccgcggccaccgcggcggcggctgatgccgccgtggcggccgctcaggccgccgtcgccgtcgtgcggcttactagcaagggccgctcggctcccgtcctcgccgccaccgtcgccggcgacacgcgcagccttgccgccgccgccgtcagaatccagacggcattcagaggcttcctggcgaagaaggcgctgcgagcgctcaaggcgctggtgaagctgcaggcgctggtgcgcggctacctcgttcgccggcaggccgccgccacgctgcagagcatgcaggcgctcgtccgcgcccaggccactgtccgcgcccaccgcagtggcgccggcgccgccgccaatctcccgcacctccaccacgctcccttctggccccgccgctcgctggtacgccgctggctaaatctcgccgacgacatcgccatgtatatgttcgatgttgacgttgtgtgttggcgatggatgcagcaggagaggtgcgccggcgacgacacgaggagcgagcacggtgtggcggcgtacagccggcggctgtcggcgagcatcgagtcgtcgtcgtacgggtacgaccggagccccaagatcgtggaggtggacaccgggaggcccaagtcgcggtcgtcgtcgtcgcggcgggcgagctccccgctgctgctcgacgccgctgggtgcgcgagcggcggcgaggactggtgcgccaactccatgtcgtcgccgctcccgtgctacctccccggcggcgcgccgccgccccgcatcgccgtcccgacgtcgcgccacttccccgactacgactggtgcgcgctggagaaggcccggccggcgacggcgcagagcacgccgcggtacgcgcacgcgccgccgacgccgaccaagagcgtgtgcggcggcggcggcggcggcggcatccactcgtcgccgctcaactgcccgaactacatgtccaacacgcagtcgttcgaggcgaaggtgcgttcgcagagcgcgccgaagcagcggccggagaccggcggcgccggcgccggcggcggccggaagcgggtgccgctgagcgaggtggtggtggtggagtccagggcgagcttgagcggcgtgggcatgcagcgctcgtgcaaccgggtgcaggaggcgttcaacttcaagacggccgtcgtcggccgcctcgaccgctcgtcggagtccggcgagaacgaccgccacgcgttcttgcagaggaggtggtga</cdnaseq>

Protein Sequence

<aaseq>MGKAARWFRNMWGGGRKEQKGEAPASGGKRWSFGKSSRDSAEAA AAAAAAAAEASGGNAAIARAAEAAWLRSVYADTEREQSKHAIAVAAATAAAADAAVAA AQAAVAVVRLTSKGRSAPVLAATVAGDTRSLAAAAVRIQTAFRGFLAKKALRALKALV KLQALVRGYLVRRQAAATLQSMQALVRAQATVRAHRSGAGAAANLPHLHHAPFWPRRS LVRRWLNLADDIAMYMFDVDVVCWRWMQQERCAGDDTRSEHGVAAYSRRLSASIESSS YGYDRSPKIVEVDTGRPKSRSSSSRRASSPLLLDAAGCASGGEDWCANSMSSPLPCYL PGGAPPPRIAVPTSRHFPDYDWCALEKARPATAQSTPRYAHAPPTPTKSVCGGGGGGG IHSSPLNCPNYMSNTQSFEAKVRSQSAPKQRPETGGAGAGGGRKRVPLSEVVVVESRA SLSGVGMQRSCNRVQEAFNFKTAVVGRLDRSSESGENDRHAFLQRRW</aaseq>

Gene Sequence

<dnaseqindica>1..444#531..1580#atgggcaaggcggcgcggtggttccgcaacatgtggggaggagggaggaaggagcagaagggcgaggcgccggcgagtggggggaagaggtggagcttcgggaagtcgtcgagggactcggcggaggccgcggcggctgctgctgcggcggcggcggaggcttccgggggcaatgcggcgatcgccagggcggccgaggcggcgtggctcaggtcggtgtacgccgacacggagcgggagcagagcaagcacgccatcgccgtcgccgcggccaccgcggcggcggctgatgccgccgtggcggccgctcaggccgccgtcgccgtcgtgcggcttactagcaagggccgctcggctcccgtcctcgccgccaccgtcgccggcgacacgcgcagccttgccgccgccgccgtcagaatccagacggcattcagaggcttcctggtaagcaacgggtgctcgtcttcttgctctggtttcgtcgtcgtcgtcgtcgccattgtcgttaatcatggcgtgtgttcgtgcaggcgaagaaggcgctgcgagcgctcaaggcgctggtgaagctgcaggcgctggtgcgcggctacctcgttcgccggcaggccgccgccacgctgcagagcatgcaggcgctcgtccgcgcccaggccactgtccgcgcccaccgcagtggcgccggcgccgccgccaatctcccgcacctccaccacgctcccttctggccccgccgctcgctggtacgccgctggctaaatctcgccgacgacatcgccatgtatatgttcgatgttgacgttgtgtgttggcgatggatgcagcaggagaggtgcgccggcgacgacacgaggagcgagcacggtgtggcggcgtacagccggcggctgtcggcgagcatcgagtcgtcgtcgtacgggtacgaccggagccccaagatcgtggaggtggacaccgggaggcccaagtcgcggtcgtcgtcgtcgcggcgggcgagctccccgctgctgctcgacgccgctgggtgcgcgagcggcggcgaggactggtgcgccaactccatgtcgtcgccgctcccgtgctacctccccggcggcgcgccgccgccccgcatcgccgtcccgacgtcgcgccacttccccgactacgactggtgcgcgctggagaaggcccggccggcgacggcgcagagcacgccgcggtacgcgcacgcgccgccgacgccgaccaagagcgtgtgcggcggcggcggcggcggcggcatccactcgtcgccgctcaactgcccgaactacatgtccaacacgcagtcgttcgaggcgaaggtgcgttcgcagagcgcgccgaagcagcggccggagaccggcggcgccggcgccggcggcggccggaagcgggtgccgctgagcgaggtggtggtggtggagtccagggcgagcttgagcggcgtgggcatgcagcgctcgtgcaaccgggtgcaggaggcgttcaacttcaagacggccgtcgtcggccgcctcgaccgctcgtcggagtccggcgagaacgaccgccacgcgttcttgcagaggaggtggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0187500, RefSeq:Os05g0187500