Os05g0187800

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Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0187800| Description = Similar to Proline-rich protein 13 (Fragment)| Version = NM_001061373.2 GI:297603977 GeneID:4338013| Length = 3646 b...")
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Gene Name

Os05g0187800

Description

Similar to Proline-rich protein 13 (Fragment)

Version

NM_001061373.2 GI:297603977 GeneID:4338013

Length

3646 bp

Definition

Oryza sativa Japonica Group Os05g0187800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5376477..5380122

Sequence Coding Region

5377261..5377500

Expression

GEO Profiles:Os05g0187800

Genome Context

<gbrowseImage1> name=NC_008398:5376477..5380122 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:5376477..5380122 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcagaccttaaaaattcaattcattggactcacatactacatataaatctttcttgcttggatcaggcattgtcagctattcccttcctggatatttatttcttgggagtacccatggtcagcatgcttctttatgtctggagcagagaatatccgaattctcagatcagcatgtatggccttgtccaactgagggtaagcttcactactaccatatatagaactcgatgccctttatag</cdnaseq>

Protein Sequence

<aaseq>SDLKNSIHWTHILHINLSCLDQALSAIPFLDIYFLGVPMVSMLL YVWSREYPNSQISMYGLVQLRVSFTTTIYRTRCPL</aaseq>

Gene Sequence

<dnaseqindica>2623..2862#tccttcgacttcgatttttcgaactcccccgaacacgacgccgacgagaaggagtcgaggaggcttcgaatccgccgccgccgccaccgccgccgccgccaccgccgccgccgacgagatgtcctccccggcagagtgagcctccctcagtctccccccgatctgtttctgttagtctctgatgccgcgtctcagatcactcgaggttggcctgggttaggggggattacaggaggggcccgggctaaatttatcgtgagtatagctgattagtttcatttttcaaggttagagaggcgtgggtcgttgtggtgtatttagttttttttttggcgcaatgaatttagtggtttaaacttgggctcttagggttcggaattagagatcgcgtgtaggattttgggttgattggttgggttgggctgttgtaactgcaggtgtctttagatggatataagcttattagttaatacactacttttgatgattttgacgagtttatgacaagtaattttagcattggtgggaactgtgaagtaggagtgttctgacggattccttggcatggcctcacttgatgaaaattgaggtctatgaattggctgtttacaaacttgatgaaaattgaggtatatgaattggctgtttacaagtggatattattgtattgtcgttgtagagtttacactccttgctaaagcacaatcatgcgcctggaacaaattgatgttttggttgggaaggttgtatctgatgctatttgtaaattttggagtcagaagcacacttctcggttcgttccactagtaaagacctaaattagatagttgcagtctttgttctccaatacatatctgctaatattcattctccaatgcgcataaattatagagtatgttatagtatttcactgccttcaaaacataaagatgcacagttggatagctataagcttatttgttgaagtatttcactgtcttcaaaacctagatgcacaattggatagttataagcttatttgttgataaattttgcacacggtgaatacaacagcctgtaataaactctggcttgaagcttggtagcatgggttgacattggccattgggtatgctcttatgatctgtggtcattaaaggcggtcgctgttttggtatgagttgaaagttattgaaataatttggtcgctttctaaaatgcatttagctttgctgaattttgttttcctatgttaaattcttaactgcttggggctctgctatgggttttgaaattgctacaagtattgagctaatttctgaatcgacaatgagtgacacttctgttataaaggctttgcaattgtgttagtttgtttctattgtcgggtacacgtgggaagtactgttcgtctgtaatgtatatggaatatataacctgagttgatatccttgatatatatagtacctgcctggtacacgggacacaggctgagtttggaattccattagcttagaccatgttagcatataactagactgttagttttagaactgtgataggtacaggacatccggtaattttcatcctagatcctctgctgttagtgtgacagtctctctttgagcatgctttagcatattggtttacaatgtaatcagaaattttgaacgagatcatatttgataaactattcattttgtttgataattgcacttgtttttgctcactgatggatgtaattttttactagttaatcgaggtttacagctagaacatgaacacatcaaagtcataactctttgctacagctgcttctggatactcgattacttactttcccttttcaggtactacaactcacttccaccaataagcaaggcatatggaacattgtgtttctttgccactgtactgtgccagctccagatactgaatccaccttttcttgccttatactatccctttgtgttcaagaaatttcaggtcagcatatgtttatatattgtctgttctgttatctaccagtacagtttattgttgccccttgtttttgcacccgaattttttaaaaacacattaggactgaggatttgtttgtctaccccattcccctctcaaacactaactgatacttagttgcgacatgcaccttctataccgtgcatagtgttgtatgtccacacaatgccctatgaacaaatttgtttagcatttggccaatgtaatcaagcattgcagtttgtcctatgcttatgttggcaattggcacctgtaatttgttgcactcctgctattttactttcaatataagagctgtttctgggccttacagatatggaggctatttacaagcttctttttcctgggcaagttttctatcaactttgggattcgccttctgatgatgtaagtcttgttgaaatcaattgtgtgtttgaaagcatgcagagtattacaataagtaaacttgcagccattggttgaatcaattgtgtgtttgggcatgcagagcaagatacggcgtgcagttagaaaagggtgcatttgaaaagcgcacagctgatttcttgtggatgatgatatttggtgccatatcactgctggtcagtgctagcttgtactgtatttttagcagcttaatcagaccttaaaaattcaattcattggactcacatactacatataaatctttcttgcttggatcaggcattgtcagctattcccttcctggatatttatttcttgggagtacccatggtcagcatgcttctttatgtctggagcagagaatatccgaattctcagatcagcatgtatggccttgtccaactgagggtaagcttcactactaccatatatagaactcgatgccctttataggtcatcaatattggtttcaagtcttgtggagcaaattatgtttgattgtggttaatatactccatttctgcagtccttttatctaccatgggcaatgcttgggttggatgtgatatttggctcagagatactccctggccttctgggaattctcgttggacacacgtactacttcctctcagtgttgcacccgctagccaccggaaagaactacctgaagacaccaatgtgggtgtatccttttttatatgggttcatggccaaagcatttcaatccatgttcaatagctactactactatattttcgatggtacacgctccatggttccttaactgctgtacagacataagattgttgctcgattcagaataggtgtgcaggcgaacgctccggtccgacccgcggccgccaacaccggatcaggcgccttcagaggaaggagctacagactcagtcaatagatctaacctagaggacaccctgtgctgcaagcctgcaacgcctatctgggagatgcaatgtagaatgaagcaaggtacatcaatgggtcaacctggacgctactagacatagactgttcagcagcttcaggaatttgggtttgcccatctaacaggaatgctgaatctgaaatgctctatgggtacaaacgatgtgaaacatttgcattgtacgcatgaaatgtttgtaggcgagaaatgtatactcccttttgttttcggatacttctggccatgattttttttcctacagtggatgatgcttagcacgttactgatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0187800, RefSeq:Os05g0187800