Os05g0192100

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Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0192100| Description = Acid phosphatase (Class B) family protein| Version = NM_001061386.1 GI:115462502 GeneID:4338026| Length = 2119 bp| ...")
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Gene Name

Os05g0192100

Description

Acid phosphatase (Class B) family protein

Version

NM_001061386.1 GI:115462502 GeneID:4338026

Length

2119 bp

Definition

Oryza sativa Japonica Group Os05g0192100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5634714..5636832

Sequence Coding Region

5634961..5635360,5636349..5636563

Expression

GEO Profiles:Os05g0192100

Genome Context

<gbrowseImage1> name=NC_008398:5634714..5636832 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:5634714..5636832 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgggtggaagacggtgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccactaccgccgtgactccgccgtcgtcatcgacgaggccatcgcctacgccgagagcctccagctctccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacctcccctactacgccaagcacggattcggagctacactgtacaatgatacgagcttccgcgaatacgtggcggaagggagcgcgccggcgctgccggagacgaggcggttgtaccggcggctgctccagctcggcgtcaagccggtgttcctgacgggccgcaccgaggaccaaaggaacatcaccgtcacaaacctccgccggcagggatactccgggtggatggagttgttgctcaagccagcagtgcacgccgccggcgagctccaggggtccgccgttgcatacaagtccggcgagcggcaaaagctggaggatgccggtttcaccatcctcggtaacattggtgaccaatggagtgacatcctcggtacaccggagggcgcccgcaccttcaagctgccggaccccatgtactacatcggctag</cdnaseq>

Protein Sequence

<aaseq>SGGRRCRPGARATSATTCSGGHYRRDSAVVIDEAIAYAESLQLS GNGKEIWVFDIDETSLSNLPYYAKHGFGATLYNDTSFREYVAEGSAPALPETRRLYRR LLQLGVKPVFLTGRTEDQRNITVTNLRRQGYSGWMELLLKPAVHAAGELQGSAVAYKS GERQKLEDAGFTILGNIGDQWSDILGTPEGARTFKLPDPMYYIG</aaseq>

Gene Sequence

<dnaseqindica>1473..1872#270..484#agcttgtttagcttaattagcagtagcacaaagcagcaatataatggcgacggcggcgaggctgctcctcctcctcttcctcacggcggcagccagcgcgtgggagatgaacatccggttgccgacggagatgctgaacggcggcgaggccgtggtggcgccgatcatccacgcgctgcggccgctgctgggctccggcgggcagctggcggcgcgcgccggcgtggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtggaagacggtgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccactaccgccgtgactccgccgtcgtcatcgacgaggccatcgcctacgccgagagcctccagctctccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacctcccctactacgccaagcacggattcgggtacgtatactatacgtacacgtacacgtacacaccactttccttgcagtattacctatacatatatatcttgtattatacgtgtattgctgcaggtatatacgcctcatttcagttgggacttacaccgcgcgctgacttggttatacatttatctactggcaacttgctggcaagataatactactatatatgaaaaaaatatctaaaaatctagctgatgtgacataattaattaagtgtcaaaattatgatgaactatttaatgtgcatacaaatatacagtatgtgaacgtattattaaattgagaccggcctgcctagttcacaaattaatataggaaatactggggtattacaaaatgtgaagtcaaagatgaaaagtatatatcatccaattaatgaatataacacagtaaaacattctcaaaatagtaaaaaatagcaaggagatgcgcatctatatatgcttagcaagattccaccggacattccaagacctcgcaaagaactagataactttaagcattatattgattaagaggataaaaagaacactatgcacttgtccatgtggctatttttaggcaaaccactgaaacctttattagattcttcaatcaataatttattactagcctgtaggaagtcagaaccctaaaaaaacagattggaccagcagatcaggtaatgagtgatgcaaacatgcacaggctggcagacagtacattttgtcgggcttatattgtccagcagtcatataagtcagatccaaaattcgttctttcaaaaaaaagatccaaaatttaatcgttatacaaattatgggtggatttatggaccactgcatgatgagggcgttagttagatctttcactaattgttaattttttcaaatatgcacaaaagttggaactttattttgaattcctgtaagttctaaattaatgaagagtttcattaatgattttttactaacacccggcagagctacactgtacaatgatacgagcttccgcgaatacgtggcggaagggagcgcgccggcgctgccggagacgaggcggttgtaccggcggctgctccagctcggcgtcaagccggtgttcctgacgggccgcaccgaggaccaaaggaacatcaccgtcacaaacctccgccggcagggatactccgggtggatggagttgttgctcaagccagcagtgcacgccgccggcgagctccaggggtccgccgttgcatacaagtccggcgagcggcaaaagctggaggatgccggtttcaccatcctcggtaacattggtgaccaatggagtgacatcctcggtacaccggagggcgcccgcaccttcaagctgccggaccccatgtactacatcggctaggttgctgagtaacaagtccaatgaggcccagactccgtgtcacgtgcgtttcatctttgttttgtcttgaaatgcttctaagttacaataattttcgacgcgcgtctatctgtacttttccttgtgagattgatgagatttgtaatagcatgtacgtgtaagagcggtaaatctatctagctatgtactattgagcaagcttgtcgcgtgcgtatctttgtctaataattaagaaaaattgcaagat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0192100, RefSeq:Os05g0192100