Os05g0198400

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Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0198400| Description = Similar to Zinc transporter 4, chloroplast precursor (ZRT/IRT-like protein 4)| Version = NM_001061410.1 GI:115462550 ...")
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Gene Name

Os05g0198400

Description

Similar to Zinc transporter 4, chloroplast precursor (ZRT/IRT-like protein 4)

Version

NM_001061410.1 GI:115462550 GeneID:4338051

Length

3268 bp

Definition

Oryza sativa Japonica Group Os05g0198400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6072857..6076124

Sequence Coding Region

6073088..6073124,6073201..6073862,6073952..6074101,6075342..6075647

Expression

GEO Profiles:Os05g0198400

Genome Context

<gbrowseImage1> name=NC_008398:6072857..6076124 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:6072857..6076124 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagcggttcgtgcagttcttgaggcggggcaatgggttgatggcggcgtcgctggcggcggggagctgcgcggaggaggtggcgaaggcggagggggccgggtgcagggacgacgcggcggcgctgaggctcaagggggtggccatggcgacgatactggtggccggggtggtcggggtgggtttgccgctggcggggcggaagcggcgcgcgctgcgcacggacagcgccgcgttcgtggcggcgaaggcgttcgccgcgggcgtcatcctcgccacggggttcgtccacatgctgcacgacgccgagcacgcgctgtccagcccctgcctccccgcgcacccgtggcggagcttccctttcccggggttcgtcgccatgtccgccgcgctcgccacgctcgtgctcgacttcctcgccaccaggttctacgagggcaagcacagggccgagacggaacgcgtcaaggccgccgccgccgccgcgctcgccgcctcctcggctagcgacgatgacatcaccgtggtcaccgtcaccgaggacgacaacgacaacaaggcgccgctgctgcaacctcactcgcactcacacagccacccccatgggcatgggcatggccacgagttggcgcaaccggagggcagtggcggtgagggggaggtgccggcgcaagtgcggtccgtcgtggtgtcgcagatacttgagatggggatcgtgtcgcactcggtgatcatcggattgtcgctcggggtgtcacggagcccctgcacgatcaggccgttggtggcggcgctctcgttccaccagttctttgaggggttcgcgcttggcggatgcattgctcaggcacaattcaagacactatcagcagctataatggcatgtttcttcgccatcacaacaccagctgggatcgcagctggtgccggtgtggcgtcattctacaacgccaatagcccacgggctctagtggtggagggcatcctcgactccgtgtcggccggcatcctaatatacatgtcgctggttgatctcatcgccgcggacttccttggcgggaaaatgacaggatcgacacggcagcaggtgatggcatacattgcactgttcctcggcgctctctccatgtcatcccttgcaatctgggcctga</cdnaseq>

Protein Sequence

<aaseq>MERFVQFLRRGNGLMAASLAAGSCAEEVAKAEGAGCRDDAAALR LKGVAMATILVAGVVGVGLPLAGRKRRALRTDSAAFVAAKAFAAGVILATGFVHMLHD AEHALSSPCLPAHPWRSFPFPGFVAMSAALATLVLDFLATRFYEGKHRAETERVKAAA AAALAASSASDDDITVVTVTEDDNDNKAPLLQPHSHSHSHPHGHGHGHELAQPEGSGG EGEVPAQVRSVVVSQILEMGIVSHSVIIGLSLGVSRSPCTIRPLVAALSFHQFFEGFA LGGCIAQAQFKTLSAAIMACFFAITTPAGIAAGAGVASFYNANSPRALVVEGILDSVS AGILIYMSLVDLIAADFLGGKMTGSTRQQVMAYIALFLGALSMSSLAIWA</aaseq>

Gene Sequence

<dnaseqindica>232..268#345..1006#1096..1245#2486..2791#attcttcctttttccggcgactcgcggaattgcgggtggatttgctgcttccctcgctgtcgactcggctcgggccggtgcttttttaagtgacgtgagaagaaagcgaggcatcgaatccaatccaatccaatccaatccagagtgggggtaaaaccagcgatctttgagggggcattttctttcatttttttactttttggttggcttgggattcgccgccggtgtccgatggagcggttcgtgcagttcttgaggcggggcaatggtaaagattggttgatttgggttgaatatgtttgtgcttgcgaggtgtttgattggtgttcttgggggtggtgcagggttgatggcggcgtcgctggcggcggggagctgcgcggaggaggtggcgaaggcggagggggccgggtgcagggacgacgcggcggcgctgaggctcaagggggtggccatggcgacgatactggtggccggggtggtcggggtgggtttgccgctggcggggcggaagcggcgcgcgctgcgcacggacagcgccgcgttcgtggcggcgaaggcgttcgccgcgggcgtcatcctcgccacggggttcgtccacatgctgcacgacgccgagcacgcgctgtccagcccctgcctccccgcgcacccgtggcggagcttccctttcccggggttcgtcgccatgtccgccgcgctcgccacgctcgtgctcgacttcctcgccaccaggttctacgagggcaagcacagggccgagacggaacgcgtcaaggccgccgccgccgccgcgctcgccgcctcctcggctagcgacgatgacatcaccgtggtcaccgtcaccgaggacgacaacgacaacaaggcgccgctgctgcaacctcactcgcactcacacagccacccccatgggcatgggcatggccacgagttggcgcaaccggagggcagtggcggtgagggggaggtgccggcgcaagtgcggtccgtcgtggtgtcgcaggtgtttcatctgttctctgaattggaggctgagttcattaatgcttttttggcgcaatgcatgatgtctgatgaatttgtttcttgcagatacttgagatggggatcgtgtcgcactcggtgatcatcggattgtcgctcggggtgtcacggagcccctgcacgatcaggccgttggtggcggcgctctcgttccaccagttctttgaggggttcgcgcttggcggatgcattgctcaggtgaggaaattcagcagaacgtcatgcatcaattctcattatttacatattttcctctattgatgaaattatttaattgatgcttaaccgtggtaaatccaattgagtatagtttatacataacaattttacatgtgactatatgttatgttcttgttgtcagggattgtttgattgtttgtttgttgtatgtatatggcattggccttttggcacatggggtccacctatttgaatttcgggaaggcgtgacatttggattcagatgtcgtatgctcatcttgttaaagtttgttgtaattattgtgcaacaactatatttttactagcaagttgacctctgtccagatggtatttactgttaaatgattaacctttttatttaaaaagttatcatgggacattcaacttgcaagccttaagacgaacatagagttgatagtatggatgcaggcttttacatagacgtcattttccatctgagcaaatcatctttcatgatgtataaaatgtggcttctagaacagtgaatttgtttgaggcagttagctatcctgttattttcactaccaccatttgtgattggaattttgctataaaaaaaatctggttcacaaattagttggtactattaggtccctctggtattaccatacgactatatgtctcgtagtctaggtaatctaagtctccaagcttcaaattggctgtcactctccatagcaaccgtaagaagttgaacttttatttttagaattttaattcgtggggaaaatcaatattatctccggcataatagcgtaattgttggcagcatgccatgatgttgacagcaggagttctgaccctaatcggactttgatattcccagaaatattattcttgttgtatttgtccactttgtaatactctcgaagttgaaaggtattgatgtatgacaattgaaccatttgagttcaatattatgaatagtttgggattataatttttttctcttaaaacttaattggtcaatgcaaataaattgattagactgctatgcttctcataacggccaactactttgccaataatattcaagtgggtactatcagaaaattaagtgagatgtctatctgctgagtacagcaccttttttatacttttgcttcattgttatttttcttgatgatcttagtggttctaaaacctttctcatcagtataacttagttacacactaacaaatcttctgaccacaggcacaattcaagacactatcagcagctataatggcatgtttcttcgccatcacaacaccagctgggatcgcagctggtgccggtgtggcgtcattctacaacgccaatagcccacgggctctagtggtggagggcatcctcgactccgtgtcggccggcatcctaatatacatgtcgctggttgatctcatcgccgcggacttccttggcgggaaaatgacaggatcgacacggcagcaggtgatggcatacattgcactgttcctcggcgctctctccatgtcatcccttgcaatctgggcctgaaaaccagaggccatgggtttgaagatagttgcacaacaacgcatacagagtagtagtagcagcttttggctcatatcacaacaacatgccctgtttttcatgggcgtgagactaatctggcgctgatagaaaaccggggcattgtaatgtacacatatgtatagcttttgcttgtagctcctactactgcccccaagctcccaaccatatgatcaccacagcaagtgttgctaatgtgacttatgtgaggtggtgatggctggagagtgttgttggctgagtatatatatttttttgttctttcctttttctaatgaaaggtgtttatcttttttaaatgaattggcaccagcagcatctctgcatctgctgctattgtccataacaacagttcgattggtgtgatcatgtgatgtatactccctctgttaacataagggtttaaatttgtacgtaatatagagattcctatgtgat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0198400, RefSeq:Os05g0198400