Os05g0199500

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Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0199500| Description = Glycosyl transferase, family 31 protein| Version = NM_001061413.1 GI:115462556 GeneID:4338054| Length = 4950 bp| De...")
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Gene Name

Os05g0199500

Description

Glycosyl transferase, family 31 protein

Version

NM_001061413.1 GI:115462556 GeneID:4338054

Length

4950 bp

Definition

Oryza sativa Japonica Group Os05g0199500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6173201..6178150

Sequence Coding Region

6173769..6173863,6174526..6174668,6174983..6175096,6175558..6175657,6175740..6175822
,6175910..6176059,6177541..6178028

Expression

GEO Profiles:Os05g0199500

Genome Context

<gbrowseImage1> name=NC_008398:6173201..6178150 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:6173201..6178150 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgctccaccaccaccgccaccaccaccactccgccgccgtcgccgtcgccgtagccgacgacgacgacgaggccaagccgcgccgcccctactccaccttcgcctccccgcgcgcgcccacctccgccttctccgccgccttctcaacccaccgcctcctcgtcctcttctccgtcgcctgcctcctcgtcgccgcggcctccctcgccttcgccttctccgcccgcgccgcgaccctgcagccgccgcccctcgccgccgtggccgaagccaccgccaaggtcgccttccgctgcggccgcgccgaggacaccctccgcgccttcctcgcctcctcctcggggaactactcctccgcggcggaggggagggagagggagaaggtgctcgccgtcgtcggggtgcacacggagatcggatccgccgcccgccgcgccgcgctccgggccacctggttcccgcccaagcccgaaggcatcgtaagtttggaacatggaactggtttatcttttaggtttgttgttggacgaaccaaagataaagaaaaaatggcagatcttcagaaagaggtagacatgtatcatgatttcttgtttgttgatgctgaagaagatacaaagcccccacagaaaatgttagcgtttttcaaagcagcttatgacatgttcgacgcagatttctatgtcaaagctgatgatgctatctatctgcgcccagatagactcgctgctcttcttgcaaaggacaggcttcatcagcggacatacattggttgcatgaaaaagggtccagttgtcaatgacccaaatatgaagtggtatgaaagttcgtgggaattattaggcaatgagtacttcagtcatgcatctggtttactatatgctctttcttcggaggtggttggatctctagctgctacaaataatgatagtttaaggatgtttgattacgaagatgttactattggatcatggatgcttgccatgaatgtaaagcatgaagacaaccgtgcaatgtgcgattcggcatgcactcccacctccattgctgtatgggacagcaagaaatgttcaaattcatgtaacacaactgagatagtaaaggcgcttcacaacactaccttgtgctcaaagagccctacattgccacctgaggtggaggatgagtag</cdnaseq>

Protein Sequence

<aaseq>MPLHHHRHHHHSAAVAVAVADDDDEAKPRRPYSTFASPRAPTSA FSAAFSTHRLLVLFSVACLLVAAASLAFAFSARAATLQPPPLAAVAEATAKVAFRCGR AEDTLRAFLASSSGNYSSAAEGREREKVLAVVGVHTEIGSAARRAALRATWFPPKPEG IVSLEHGTGLSFRFVVGRTKDKEKMADLQKEVDMYHDFLFVDAEEDTKPPQKMLAFFK AAYDMFDADFYVKADDAIYLRPDRLAALLAKDRLHQRTYIGCMKKGPVVNDPNMKWYE SSWELLGNEYFSHASGLLYALSSEVVGSLAATNNDSLRMFDYEDVTIGSWMLAMNVKH EDNRAMCDSACTPTSIAVWDSKKCSNSCNTTEIVKALHNTTLCSKSPTLPPEVEDE</aaseq>

Gene Sequence

<dnaseqindica>4288..4382#3483..3625#3055..3168#2494..2593#2329..2411#2092..2241#123..610#agcagctgtctgaagcttaaccaaagcttaaacccaaagcaaaccagaggcagatcagatcagagctagtagcagcaagctcgcgatctcccccaccttctagaaccttctagaaccgccgaatgccgctccaccaccaccgccaccaccaccactccgccgccgtcgccgtcgccgtagccgacgacgacgacgaggccaagccgcgccgcccctactccaccttcgcctccccgcgcgcgcccacctccgccttctccgccgccttctcaacccaccgcctcctcgtcctcttctccgtcgcctgcctcctcgtcgccgcggcctccctcgccttcgccttctccgcccgcgccgcgaccctgcagccgccgcccctcgccgccgtggccgaagccaccgccaaggtcgccttccgctgcggccgcgccgaggacaccctccgcgccttcctcgcctcctcctcggggaactactcctccgcggcggaggggagggagagggagaaggtgctcgccgtcgtcggggtgcacacggagatcggatccgccgcccgccgcgccgcgctccgggccacctggttcccgcccaagcccgaaggcatcgtaaggtttccccccacattgctttcctccattcccacctaccaacttggatctagctactcgctttgctctggattgctgctgctcatcttacgcttacagtactaagcttctagccttgtgtctagcttatgctgcgatgggatctgtagagcctttggttgctgtcacatcttacatgctttttttactcttcaacaaatttttgatcaatgtggcgtattgagcaggtccaatcgctaaagggcaatgtgtgatcttgatatttttcatattttgatcactacggaaggcgatcctactattatataaactttcagatgggttctgcgataatgtgttttcatgaaaagagctagtaaattatgataaacaaaattaaggatgctgtttcagccgtcccaagtgtccaatacgtttggttgctaaccagaatttaccacaattttgcacagggatgtgccaatgcaaactcctttctattcaagtcacattatatcgattatttctagcttttcgatgattgatcttaagtgtaaattgcaaaaagtcacaaccaagcctcatgtacatgaaccaaatcttgtgttgagtgtttcattgaacaaatttcccgctgcaacattcagggtctccatctagtaataagggtacactagcactttttccctctttgtggagatcttttaagagttgcaggacatatgaattgtaccataactccccaattcaatttacattgtagtggcatgagtgttctcaatgtcggtagatgggtcttaattggtcacccactttctagtaagtatacagtaaacttaaatcaaccatgtatacagctcgactattgtagagtggaacaccattagctctggagatttggggaaattagttcttaatccctggcatctaatctcagggtgatgatgccacagccgaagcattgtgaggccagttcttcttcatgcatatttctattgtccgctcaatagtcaattctactgcattcttcatttccccaaagtcaagatcagccatcttgattggcatttggttaggacgaaagcagtgtatatctgatatacttccataagcgaaatcaagctatataatattaattacttattacaattttaccgttaatcactaagaatcaccttagcttctggattcacaaactttttatgaagaggtgtactgactactgaagcacattaccagagagaaatgaatgtgctgatttgaaaattactgtttgtcaagaagaattgattgtcgtaaagtttactttgtattctgtttggaacttataaaatacatctctttgtgtaacttagctgtcttaaaaaatcattacattcagttaagtccattcactaattcaatgtttgaatcaggaacacatgtgggctagtatgaacagttcatcagtaaagaatatacaatcttttataggctaactctggcacttctctctatattgcagtttggaacatggaactggtttatcttttaggtttgttgttggacgaaccaaagataaagaaaaaatggcagatcttcagaaagaggtagacatgtatcatgatttcttgtttgttgatgctgaagaagatacaaagcccccacagaaaatgtaaactctctctcctcttatgtttgtacctttttacatatacacgtgattaatcttaagcctcccctcttgttgcccatgtgacaggttagcgtttttcaaagcagcttatgacatgttcgacgcagatttctatgtcaaagctgatgatgctatctatctgcgcccaggtaaagtttgtgacctgatgtacaaaaactgttgtttagatggttaggtctgttatatgactcgatcatgctcttaagccagatagactcgctgctcttcttgcaaaggacaggcttcatcagcggacatacattggttgcatgaaaaagggtccagttgtcaatgacccaaatatgaagtggttagttcaaaattttgatacatacattggttttaagtttatttacatattccctcggttcccaaatataagcatttctaggattcaaattttgtacacaatataaacatttctaggacactgattccaatgcacggtaatcgaagcgttttcagccaatcaggtgcttaggaggtcaatctaaacaattcaaattcgaaatttgaccactgaggtggctgaaagggtatttttccccttatccttaatcgctgctaaaaaatctagaaatgcttatatttaggaacgaagggagtacttctgttttctgtacatacctctaatttttttaatggtgattagattcgcttgtacaatgcacaccaacctctggcgtatattggtatctcagacaaattgattttcggttgccctgttcaatgatcatgctattgtttcatgacacaagtgatttatttcaggtatgaaagttcgtgggaattattaggcaatgagtacttcagtcatgcatctggtttactatatgctctttcttcggaggtggttggatctctagctgctacaaataatgataggttggccagtcatcttttcctatccatgccatagagtgaaaacacaggaacaatttagttgaccattcttgtctcttaaaacataataaagcaaaattgcaacagttctgcgaatccaaaacatcgtgtagtttctccttatcctgtatatttccatttacaagaatacaagaatcaagccacgcttgaaattctatatttgattcatattatagactagtctaccaacaaaaaaaaaaaatccatccttgtttttctgtttgttttgtgtatttttcatgtaatcattatttgtttcttcatgcaactctcagtttaaggatgtttgattacgaagatgttactattggatcatggatgcttgccatgaatgtaaagcatgaagacaaccgtgcaatgtgcgattcggcatgcactcccacctccattgctgtatgggacagcaagaaatgttcaagtatgtcttggtaaattgtgtttcgtgatcgtagtgataaaatagtcagaatgggaaaattcatcatcgctgatttaattatttatgaaatagtactatttcttccttttcctatttctaatattgtgattcctgatgaaagcaaaactaactttacatctgatatatctctgtgtagatgcactagctattattactgcatactccatccagtcatacatatttgacgtctaggacaagattcggtcaaacttttggtactttgatattaataatctgataatttctttaattcttaatctacaaataaaaagaaacaatatgtatagatttgccttgaaatgtactatgtactattaaattattagattttgtaaacttatgttaatacaaaattgatggcgaaagtttttattattagattttgtaaacttatgttaatataaaattgatggcgaaagttttaaaagtttgaccgaaacttcgtaaacatcaaatagtcatgactggagggagtaatatttttggtgtctgaagacttaatttgaatatattttttagtaattagctgatattgcaaaataagtttgattaaccataacctcatgcctttgacttcttttgatgcataaatgttttacattagccttgttgacttccagattcatgtaacacaactgagatagtaaaggcgcttcacaacactaccttgtgctcaaagagccctacattgccacctgaggtggaggatgagtagaaccttagtgttattttttttcccgtcaacagatgccaggtattgcctgtcgtaacatctgatttctagttaaatgtatttccataccgttgtattcattggtgaactcatctgagagccatactgttgcagcttcttgttgctgagagttctccgagaagtgtaccatcgcgagaatgatgtaggatttgtgtgcacactcccgatattgggataagcgaacaagacaatatgtaggttcaggcaaaatgtatactcccgactgatagaagtgggaacatttgttgtcttatgtgccatagccgattctggccatcgattctttcactggctatgttgttcattgatgtgtatataaccatatatataccccagtctgcattgttgatcatgaacttcatttcatgatcatggataactccagcttatttggattgatgtgttctcatagaaccagaacccagcttatgtccggtcggagtaataatgaccaattcatgttgctgattacactcctgagatatgattatctgaagtaaggaccaatttatgttgctgattacactcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0199500, RefSeq:Os05g0199500