Os05g0200100

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Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0200100| Description = The start codon is not identified.| Version = NM_001061415.1 GI:115462560 GeneID:4338057| Length = 3996 bp| Definit...")
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Gene Name

Os05g0200100

Description

The start codon is not identified.

Version

NM_001061415.1 GI:115462560 GeneID:4338057

Length

3996 bp

Definition

Oryza sativa Japonica Group Os05g0200100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6215975..6219970

Sequence Coding Region

6216176..6216301,6216789..6216953,6218670..6218855,6219621..6219839

Expression

GEO Profiles:Os05g0200100

Genome Context

<gbrowseImage1> name=NC_008398:6215975..6219970 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:6215975..6219970 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ccgctcgctcgctgttggcacggtcccggagcggagccggagcgcatggcggaggccctcctccccctgccccggcgcctcgtcgtcaccgcctccacgcccgcgtgctcctctgcctcctcctccacgtccccgtcgcctcactgcctcctctcgcgcgccaacccgcgcccgccgcgcttggccgccccctcgcccccgcgccaccgccgcctcaaggcccatgcagccgtctcagacaaaagtgagcaaccaaaatggtgggagaagaatgctggtccaaatatgattgacatccactctacacaagagttcttggatgcactgagggatgcaggcgacaggcttgtaattgtggagttttatggaacttggtgtggttcttgcagggcactcttcccaaggctctgcagaacagctgtggagaatcctgatatcttgttcttaaaagtaaattttgatgaaaataaacctatgtgcaaacggttgaatgtgaaagtccttccttacttccatttttaccgtggagctgacgggcaattggaggcgttctcatgttccttggcgaagtttcagaaactgaaggatgcaattgctgttcacaacactgctcgctgtagcatcggtccaccagtcggagttggggatgtgctggatagccctgaggagaaacctgcagaagctagtccccggtag</cdnaseq>

Protein Sequence

<aaseq>PLARCWHGPGAEPERMAEALLPLPRRLVVTASTPACSSASSSTS PSPHCLLSRANPRPPRLAAPSPPRHRRLKAHAAVSDKSEQPKWWEKNAGPNMIDIHST QEFLDALRDAGDRLVIVEFYGTWCGSCRALFPRLCRTAVENPDILFLKVNFDENKPMC KRLNVKVLPYFHFYRGADGQLEAFSCSLAKFQKLKDAIAVHNTARCSIGPPVGVGDVL DSPEEKPAEASPR</aaseq>

Gene Sequence

<dnaseqindica>3670..3795#3018..3182#1116..1301#132..350#ccatccatccatccatctcccaccaccacaccttcgcccctcccgcggcaaccaccgctcctcgccgccctcggatgctcccgccgccgcctccgccgcaatccgagtcatcggcggcggccgcgctctagccgctcgctcgctgttggcacggtcccggagcggagccggagcgcatggcggaggccctcctccccctgccccggcgcctcgtcgtcaccgcctccacgcccgcgtgctcctctgcctcctcctccacgtccccgtcgcctcactgcctcctctcgcgcgccaacccgcgcccgccgcgcttggccgccccctcgcccccgcgccaccgccgcctcaaggtacgtgtgctgtccccctttctcctctcttctgttcgtcgcgctaattgtgtagggtttttcggaggtcaatttgttgattctacgcgaccctgtagatcgctatagcaccacaaacggctttgcgtttggtgtggattggggaaggaaaggcttactactactactagcttttatgtcttttgaggggttcaaaacttgaaattgagccaaacaagtctctcgaaatcatgcatgcttcatcacctagcataccataagtgccattgctgggtctttgtacagtatctctgttgcttgatgtcaattgaaatggtacatgttatgatggaaaatgcatggcaacttggtattttgaagaccgcagtttttcacctcgaaatgggttcttacatcattcttttgtggattttagattagactttgctccacgattactttattcacgacaaaacatgcataagctttgcatttatgtttatacgttattgttatatattgtattgtgcttgttttatttagccgataggaatcacattaacaattaacatctttctccttttctgccaggattttatatatgttttggcaactgtgagtggtatgaactaactattgaactttcaaaacgtgtcaatttgtccttgcttgagatttttgtggatgtcctactagtttatcttgagtttacgtgctttggagttcgtatggtattggacaagtttgccgctgatgttttgatcgttttggttgatcttgctctaggcccatgcagccgtctcagacaaaagtgagcaaccaaaatggtgggagaagaatgctggtccaaatatgattgacatccactctacacaagagttcttggatgcactgagggatgcaggcgacaggcttgtaattgtggagttttatggaacttggtgtggttcttgcagggcactcttcccaagggtatttctcatttcctactgctgccatgagtataactatttgccgttttgatcttctccttgatacaattctgaaatttctcatgtgagctttatcaaatttccttgcatagttagattaataattgatgtttagcattatatgggtttagattggtactcttaagctctaaagaagtgcgtgaaagaatcatgtggcttggtcttctcatgagatgtcaaaattaggatggagtcatccaaaaagggtagtattgattttctgaattgtgaacatacatgattagctgaactcactcttctttattcagtttttatatctttcatgctttgaacttttggtcttgttttatagagtacaaattacctattcatccgcggttgtcacccatgctcatgcttattgatgtgtttccctagttggtattggtgaaagcgctcgaatgtgggaattcatctgcaaatagtcgaatatatgttgtgcttttggggggaactatgtttggcttgtttccagggcatgctagcttctgctatatctagctcttcttctattctctgacttatattctgcaggttagaccatcttgttagtattgcttcaacagtgtaggtgtaggggtaatgcaacattatttaccaattaccatatacagaagaaatgtttaggagtaatcaatagttcaataccctttttttctttccttgtaaaccgtgtaatgcctctaatgaacagaagggaacccaaactggagtcatatggcctccaagttataatcaacaaacatgcataggttgtataattgcatccatgcacttggttttgtatcatttggaccatatagaagagcagcacatacagcggcctaatgggagttgcatatggtgtgtttttcctttttttttttaatttactgggaggctattttagccctctgaacttgaatgcttctgcagatacccaaataagaggtctctggtccttcttgtagaagcttatgctgcccatatgctgaccaggtgacaataaaaaggccaatacctgaagtgcttgaaacttgtgagcaccatatattacatgtgtaacagtattccccaaaactgtcatcttatcatatctctagagcatttgccctatttcagaattaggtctcttccttctttgcatccagataaaggtttcatattgccctttctgtgtttagttactagcatggaactgatggattattgttgaaatcgatggctgttaacaacttaacatctgtgcatgacgttagtgtggcaagcttggtgcattgtgctttagtaactaggttcttttgctcagaaccatgattgggttgtgctagctagctgaaggaaaaaggctacttcattaccatcacgaggcaactcatgttgctctggccattcaactagggctaacaaataaccttccctttggactgctacatcacacttcaaggtgttttatcatgatgtattttgaatgttttaggaaggccttgttctcagagagacaattttagggacgtcgataatgataatggggaacattataatctcatcccatgcatctttttttgcccttgtcctacttgttttcatggataaaatagttttaacatttccatctcacccagctgactgttatattgcgaggacttccttagagcatgttgcttaaactaatgtgttctttattgttttgcagctctgcagaacagctgtggagaatcctgatatcttgttcttaaaagtaaattttgatgaaaataaacctatgtgcaaacggttgaatgtgaaagtccttccttacttccatttttaccgtggagctgacgggcaattggaggcgttctcatgttccttggcgaaggtaaggatgcaccagtgcgttcataagttaatttgcttcacctttcaagtagttaatcacttaatcttcaattcttcataatagtcggttcaaaaaggcatttttactttttgaacaaccctctcatgggacatgggttagctggccatgtgtgtaccagcagtcggcatgctaacccaccgctcatgctcctcaaccatgttccttgatccagtgaacccggattgaacagccccagttgtaatgcaataaattgtccacctgcagcttatgtatataaggctcattttataatatcacgttattgttttggccagtcactgttaatttcagaaactcaagttttccttggtgataattcttttccctgaagtacatttcctctctttttctgatggtatagagagtgttctgtagtgaaacattaagggtttatatctgcttttatgtgtgttttccacttatcagaaactgttcttgcttgcagtttcagaaactgaaggatgcaattgctgttcacaacactgctcgctgtagcatcggtccaccagtcggagttggggatgtgctggatagccctgaggagaaacctgcagaagctagtccccggtagatttgttctgttacagtgcgtctcgctctccattgctatatctgctcattttttttacctcgatagatcttactgtaaccaactcaggagaatattcagttttcctggataggggtggccaggcaacgggccagcatcagatgttgtaagcattactgtttaatttttttgagaaagaaaaatcgtgtattatagtgtgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0200100, RefSeq:Os05g0200100