Os05g0203500

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Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0203500| Description = Conserved hypothetical protein| Version = NM_001061423.1 GI:115462576 GeneID:4338066| Length = 3500 bp| Definition ...")
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Gene Name

Os05g0203500

Description

Conserved hypothetical protein

Version

NM_001061423.1 GI:115462576 GeneID:4338066

Length

3500 bp

Definition

Oryza sativa Japonica Group Os05g0203500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6401521..6405020

Sequence Coding Region

6403574..6403939,6404016..6404708

Expression

GEO Profiles:Os05g0203500

Genome Context

<gbrowseImage1> name=NC_008398:6401521..6405020 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:6401521..6405020 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatataggagaaagcaaaggcaaaggcaggggcaagggcaaatcaagcaacctagcagcgggtagggccaaacctataaattggccgctagcactctccgagttcctccttgattggtacattgaaaagaagttgcagctaccgccaaaagcagtgatcaagaagatacaccacactgcttgcacattagctataaatagcaagtatggcactacttacacggttgatcaagttcaacaccactacaggcgtcataaagaaaattggtctcttgtagctcgtcatctaaatgaaagtggtaatggctgggatgagactacaaaaatgttaactctctctcaagctactttggatgcacttttgataaatgatcgtggaattctttcgaagccaatccaattctttgacaagctgcaagaattatttagtggttgctcggctgatggtgcattcatggaagatccttcaagtgctgctgattttgatgacgaagatgatgaagatgataaatttgattttctgaatgatatgtcaacctatgctgatacaaaagttccacaaggtgaggactttgataaattggagtcagacagtgatgattgcaaggaggtggcagcccttagtgcagctactatccaagtttcatcgtctactaattatgatttgaagccaaacaagaagaatttcaaaaggtgtgggaagccaaagacgttgccccaatcacataatgataagtgtaacaagacaaaggcaaaatccacagctcaagtgcatgatagtgatgatgttgatgtgctgatcaacaataccttggttggaatcaaaaacactcttgagaaaccaatacagacagttgcccctcaagatccaaatattcctctatgggacatgcttaagaagattgccttagaccctgatgacaagttgagagtagggctgcacctttgtaagccagagcttcaagctaaccgcagttttcttattagcatgggtcaagaataccttgagcattggatctacaagtttctatctggtgatgatccaaatctcggctga</cdnaseq>

Protein Sequence

<aaseq>MDIGESKGKGRGKGKSSNLAAGRAKPINWPLALSEFLLDWYIEK KLQLPPKAVIKKIHHTACTLAINSKYGTTYTVDQVQHHYRRHKENWSLVARHLNESGN GWDETTKMLTLSQATLDALLINDRGILSKPIQFFDKLQELFSGCSADGAFMEDPSSAA DFDDEDDEDDKFDFLNDMSTYADTKVPQGEDFDKLESDSDDCKEVAALSAATIQVSSS TNYDLKPNKKNFKRCGKPKTLPQSHNDKCNKTKAKSTAQVHDSDDVDVLINNTLVGIK NTLEKPIQTVAPQDPNIPLWDMLKKIALDPDDKLRVGLHLCKPELQANRSFLISMGQE YLEHWIYKFLSGDDPNLG</aaseq>

Gene Sequence

<dnaseqindica>2054..2419#2496..3188#atgcttgagtagaatcacctctcttctactacttctcctcctcactgtaccaccgtagggttaggaggagaaaaaaatccccatcgatccatccatggctgcagcagcagcgaccaaggggctgctccaccttgtagatccggtggccgtctacttcctcttccactaaaatctggtgccatcagttggagctcagctctatgcgtgagagctactagaaaaaagagagcactttttcagatctgaaagggaatcaacttttcaactctctccttccctgtgcatgtgagattgcaagtctccactagtttttccacgatcttctgcagcaaggtgagaacacactctcaagttctcttcttctttttctttcttcttctttttttttttgttgcttttcccttctattgttgctttgttattccaggatctgtcaagagcatgtctgttagaagaaaaatctatgtgaaccattgcaatatttgtgtttttctccacctatttattattatttgtcatgtgatgctcagatggatttagatcatactcatgaatacattatccaacaacaagctagaactttggccattttagctaccgtgttggctattattcgttggcgacgtcgtaagaaaaatagacggattccaaggaaatatgggcctttggtggatagagatctgatcagacaaacaagactagatgatttatacaatggaactgatatcaattgcatcaatcaacttcgtatgagaaaagaagttttttggaagcttgcctccaatttacgagatcgtggtttattatgtgacacaatccatgtctcagttgaagagcaattagctatgttcctgcacactgttggtcacaatttgagaaatcgtgtgattggattttttgtcaaaagatcaagtgagatagtgagtcgatacttcaatgaggtgttaagagctttatgttatcttgctaaagatatgatacaacttagatcaatagacactcattcaaagatagttagtaacccgggccgattctacccatattttgaggtatctcgtgtcaaatttattgaacttctaatttgtagttgccttcttttttttgtaacaacaattttttttaacataggattgcattggagcaattgacggtacacatgtccctgcatttgtccctgcgaatatagttaacaggtttagaggtcggaagtcctatccaacgcaaaatgtgcttgctgcagttgactttgacttgaggtttacatatgtgcttgctggatgggagggttcagctcatgactcggtagttctcaaagatgcccttaaaagatcaaatggaattcaaatacctgaaggtgtgcacaaagtcatagtattttcaggtgtacaataacttgtggcaacacaataaaaccattcatcttatgtgttctaggaaagtactatttagctgatgaagggtatgcggcaaggcctggtatactgccaccatttagaggtgttcgatatcacctgaacgagtacgaaggcaggaaagcaccagaaacaccccaagaattattcaatcttcggcattcctcccttcgcacatctgttgagcgagcttttggaaccttaaagaatcgttttaaagtccttgctagcaagccatactttccatacaaggtccaagtgaagatagtcatagcttgttgtgttctacacaactggatacttgataatggtcctgataatataatatatgatgaagatcgttggtttaggagacttcctaggtcagctagagtagctacagatcaggatgaggagcacaagcagtgggtggcatttaggaacaatctatctaataccatgtgggatgaacactagtgttctagaaatgtatgcaataattattttcagttctagtgctgtactcaaagctagccatggatattattttatgactatgtgttgtttcagttgtatgtataccagcaattattcttttcaactctgtgcatttatgtgatatcattatttccttcaacatgcatctttttgtagctcataccatggatataggagaaagcaaaggcaaaggcaggggcaagggcaaatcaagcaacctagcagcgggtagggccaaacctataaattggccgctagcactctccgagttcctccttgattggtacattgaaaagaagttgcagctaccgccaaaagcagtgatcaagaagatacaccacactgcttgcacattagctataaatagcaagtatggcactacttacacggttgatcaagttcaacaccactacaggcgtcataaagaaaattggtctcttgtagctcgtcatctaaatgaaagtggtaatggctgggatgagactacaaaaatgttaactctctctcaagctactttggatgcacttttggtaattacttgtcctctagaatataactggtttattaacatcaattagaagttcttgatgattttttcacttgcagataaatgatcgtggaattctttcgaagccaatccaattctttgacaagctgcaagaattatttagtggttgctcggctgatggtgcattcatggaagatccttcaagtgctgctgattttgatgacgaagatgatgaagatgataaatttgattttctgaatgatatgtcaacctatgctgatacaaaagttccacaaggtgaggactttgataaattggagtcagacagtgatgattgcaaggaggtggcagcccttagtgcagctactatccaagtttcatcgtctactaattatgatttgaagccaaacaagaagaatttcaaaaggtgtgggaagccaaagacgttgccccaatcacataatgataagtgtaacaagacaaaggcaaaatccacagctcaagtgcatgatagtgatgatgttgatgtgctgatcaacaataccttggttggaatcaaaaacactcttgagaaaccaatacagacagttgcccctcaagatccaaatattcctctatgggacatgcttaagaagattgccttagaccctgatgacaagttgagagtagggctgcacctttgtaagccagagcttcaagctaaccgcagttttcttattagcatgggtcaagaataccttgagcattggatctacaagtttctatctggtgatgatccaaatctcggctgacttattggtgcatattataagttagccaaagcttgtcatggtcgatgagggtctctttttgttgcacccttttggttatgcaattgctgcactatttgtgtttaaacagttgctaaatagtactaacataggtgctatggtggtgcatattatgacaagttattaaatatgcagacaatgctaatcttttggataattcgataacctggtagctttgtagtatccttggtttactgctatattgtttaagctgtactattattggctggacctaatagccttggtttaatgttatgttatttaagttgtatt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0203500, RefSeq:Os05g0203500