Os05g0203900

From RiceWiki
Revision as of 10:10, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0203900| Description = Conserved hypothetical protein| Version = NM_001061425.1 GI:115462580 GeneID:4338068| Length = 8315 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0203900

Description

Conserved hypothetical protein

Version

NM_001061425.1 GI:115462580 GeneID:4338068

Length

8315 bp

Definition

Oryza sativa Japonica Group Os05g0203900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6450199..6458513

Sequence Coding Region

6450687..6452585,6457954..6458299,6458400..6458422

Expression

GEO Profiles:Os05g0203900

Genome Context

<gbrowseImage1> name=NC_008398:6450199..6458513 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:6450199..6458513 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccctccttctccatccgggagtacgcggcgagcatgaggggcacggcggcgtcccggcacccggccctctccgccgccggcgacttcccgccgatgccaatccggaggttccggtggtgggtcgacgagctacacgccgcggtgagtcgtcgtcgtcgtcgtcgtagctcgccggcggcggcggcggcggtggccaggaagaacagcaagcggtccgtctccgacctcttcgccgccaccggtgaagcgccggccatggatagccggcggcggaagaagccgaggtcccaagaagacgacgatggtgtcgagaagatgaagaagaaggggatcttcatctcctccacaccaaatgctccaaaggtttcagtaaacaagttacatcctccttctccccagacatttcaggtacatgaaagacaaaaacacatcaacatcgagaatatgaagatgtatgattttgaaatatggaagccagagaactctgctaaggtcccgaagaacagcattctgagaaagcatacaaagcgctcctctttcactgtcagcatcaacaaggagaaatgcagcaatctgaaagggtcagaagccatagagctaagccacaagttggggaagcatgttacattctcaggggtggatgacatacatattagaaacaagctaagttccacgttaccccaactgcaaaaccactgcaatgtgtactcagacaagtctaatgaagctgacagattagtatctgcaaaaattagttctcatgagaacaaggaagcctcaggtagggatatatacgacagatggacttctgaatcaagtggtgcaaaggacccaattaacttgattgatctgaatcgcacgctcccatgtattcccgattttaatggcgcattcatttctggttcagaggtgcctgatcttgagcatacggagaatgcaacttctgatctccaaatacctggtgatgtaagagaagaagctgttcttaagcacaatcaagacctccattccaaatcaccgcgatcgcagtgtgaacttaacagttgtgatcttgggagaatcattaacttaagatcaatagcctcactgttgcctgatgaagcaattaacatttctgacagaggaatgattggtcatccattgaactcaacagaagttaataagttttatgctgattatgagagaagttcagtaagagatgatactatggaaggaaaggctccttacatattgcctcagcatacagttcagtacacaagtcagtttacggagaattggtacaccaatatgaatttgggcaactttcatcatgctggaagagaattttcttcttgtccatgtgaaaaccagctgaattctgagaaacccatgttacattctgaaatcaatgtgcaacatgagcatgcagttatgtcacaacgtaccatgcgtctgatgggaaaagatcttacagtttccacaacaggtggcaaatgcattggtgagacagcaaaggtgcatgtgaactcctctgtcagctgccatcatactactaatattttcttagagttgccacgacaaggtcacccgtttctgtcactgcaatcccgaagtttttccaatatacaggtagatgccccaagcacaagccatgattatgttggatacaaaatgcataatttaaagcgtcgttttccggaagctgatgttttctctgggaatggaatcgaatgcgaagataggttgagggacttttcatatttgcactgtggccaaaatgcgcttgctggattttcacctcaaggaggaaaatacaacacaagatctgatcaaaactcactgtctgctacaacattcttgcctaccttcataccacatgccaagcagtcagcagtttaccgtgccaattcaacttggaaacataatccctatcctgcaaacttactagttcatcctcctgatggtacaaattttagaaaggatcaaaaccagataatcagaggagttgcagagatcccaagttctgtaaacaccatgtcaagagatactgtttggaagacgagaaaaatagacgtcgacaattctaacatttcttctggtgtcaggtatatttcaaggtctggtccggtgaagctccgccccggggcgaagcatgttttggagccgagacaagacacagatgatggcaattatccacctatgtattcatgtgtaccgtttttcgttataagaaggggtggaaatattttgtctggtcagactaaaagtcatagaaaggtctaa</cdnaseq>

Protein Sequence

<aaseq>MAPSFSIREYAASMRGTAASRHPALSAAGDFPPMPIRRFRWWVD ELHAAVSRRRRRRSSPAAAAAVARKNSKRSVSDLFAATGEAPAMDSRRRKKPRSQEDD DGVEKMKKKGIFISSTPNAPKVSVNKLHPPSPQTFQVHERQKHINIENMKMYDFEIWK PENSAKVPKNSILRKHTKRSSFTVSINKEKCSNLKGSEAIELSHKLGKHVTFSGVDDI HIRNKLSSTLPQLQNHCNVYSDKSNEADRLVSAKISSHENKEASGRDIYDRWTSESSG AKDPINLIDLNRTLPCIPDFNGAFISGSEVPDLEHTENATSDLQIPGDVREEAVLKHN QDLHSKSPRSQCELNSCDLGRIINLRSIASLLPDEAINISDRGMIGHPLNSTEVNKFY ADYERSSVRDDTMEGKAPYILPQHTVQYTSQFTENWYTNMNLGNFHHAGREFSSCPCE NQLNSEKPMLHSEINVQHEHAVMSQRTMRLMGKDLTVSTTGGKCIGETAKVHVNSSVS CHHTTNIFLELPRQGHPFLSLQSRSFSNIQVDAPSTSHDYVGYKMHNLKRRFPEADVF SGNGIECEDRLRDFSYLHCGQNALAGFSPQGGKYNTRSDQNSLSATTFLPTFIPHAKQ SAVYRANSTWKHNPYPANLLVHPPDGTNFRKDQNQIIRGVAEIPSSVNTMSRDTVWKT RKIDVDNSNISSGVRYISRSGPVKLRPGAKHVLEPRQDTDDGNYPPMYSCVPFFVIRR GGNILSGQTKSHRKV</aaseq>

Gene Sequence

<dnaseqindica>5929..7827#215..560#92..114#gccaaccacaccacatctcaaactctctacacacgtttccatgtagagatcgatcgatcgatttctttgggattcttgagctcatccatccatggcgccctccttctccatccggtatgtagtttgatgctttgtgttttcttgttttgtttttttaatttttggtttcttgatattcttgtttcttggtttggtgttgactgacacgaaaaagggagtacgcggcgagcatgaggggcacggcggcgtcccggcacccggccctctccgccgccggcgacttcccgccgatgccaatccggaggttccggtggtgggtcgacgagctacacgccgcggtgagtcgtcgtcgtcgtcgtcgtagctcgccggcggcggcggcggcggtggccaggaagaacagcaagcggtccgtctccgacctcttcgccgccaccggtgaagcgccggccatggatagccggcggcggaagaagccgaggtcccaagaagacgacgatggtgtcgagaagatgaagaagaaggggatcttcatctcctccacaccaaatgctccaaaggtaactactagcacggtgtgcgtggggtccatgatgtcatcgtcctgtagctcggcctagctttatgaaacagtgcatttaaagctcctagacttttcttttcatggaaaatttcatttctgatcctagtagtagaatatatctagattagctttctgctcttgttagactcctaagcaagataaagttaattttagtatagatatagcttggattagtgatgggcgtgaagctagctagcagtagtagtagtgaactagtgattgattgctgctgttttcatgtttgggttactggggtgcagtgtgttccacttccaccaacacactagtggcctgaaacttgtgcaatctgaggctaattggcttgattgtttgcgtggtttgattaattagtacacatgtgtaggtgcagacatgactttgtctgtaatcttatcttagggagagcgttatatttcatgtaacacgtgctactccctccattccacttaatcaccctatagtttttttagttattctcaaataatcatcatattaatattattttccaagtctattcattatatgtacataggagtaaaaggatattgatatatccatgcacataaccctttataaaccaaaatacaatgttttgatttgtggtttgctagaaaatagtatggatgcatgtatacatcaagtttgttactgaagttaaatgtagtatgaaaagttattatcttttcttggactcggccaagaaaactcctctacccaaaaattagttttttttttgttggaacagactaattaacttggagctgctaaatacgcacctctacgtacggattatgcagtgaataacgtgttaagttcttggatcgtacaggagcataaatacttaattgctgccattattattccatgcttaatagtagtactcctgtatttagtttgcaggagatcgatactcctagatagtactcctcgaattaattataattactccttgttcacagtagaggagaggaatcgatcgaattaagttcacagtggcactctgcagagtcgtactaacgtggcgctagctgcgtgtaatactgatggatgataggacagaaggcagtagctgtacatgacaagtagcagtcctagtcttcattggtactagtgtgcatgcgtacctttgctgtaatgcatcttgatcgaagagttactgctccctaaatttccgtgtccaatgtttgactatccgttttatatgaatttttttttataattagtattttcattgttgttagatgataaaacatgattaatactttatgtgtaacttgtctttttaatttttttcatattttttttaaataatacggacggttaaacgttggatacggaaattcagagtttgtcttttttttttttggacggagggagtacacttgtgagtagcattaattgttttatttttcttgttttatttcatctttaaatctttttagtggagagtcccttgatcatagaatgcttctagctaagtacccatttggccatttccatagggattctctccctatttttacatacagaggattagaggaaggcatataaatagagaggtatggagtacaaaatatagacacatgactgaagtagaaaataataattttggggtcagatttttacacttggtactcttaacaatttaagttaaaggcgacgctgaaaaatagaaagcgatgaaaaagaattctaaatttggcaatttagatcctctacagtactgctcagtgacatatgggcctgaggatctatggacccgcatatcagtgagaccttcactccaaatttggtggtgtcttataagcaaatgagttggtaagtacccaccattcattctttttttggtattgttttataatgttgcaatgtaacacttgaaatctttaacacactaatatattaaattgttaaaatttgatatgtaaaaatggcataatagatttgtcataaaaaaaacttccatgcaattaataatattataaaatataattattaaaagtaatggtacatatatgtattatattggagagattgtcaatgtaataaacgatgagtaactacaaaatggaggggatatgtggacactccatgcattaaattttcaagttattggcttaaatgagaaatctcttgcagttggctaaataaaacagtattgtcgctttttagatactaaaagcgagtctagaggaaagtgagctgggcatatctataaacaatatatgcaacaattccaataagtgggttagtgtgtgaagcactagtccttccatgcagtcaacctttcaaaattttttattactcatatttatttatagaaatacctgaatttatccatgtggatgaacagcatatatataataatctgtaaaagcgttcccatgtcattgtgtgttcaacaactttttttaacatataatataactagaaaacatttgtggccaacggtgtgtattagactgtgccaacgtcactactatagaaatggtcttcggaatcggtggcaggtaatggagttgatgggccatttgttgtactggctgaaggagctctagagcggtgatgggccagttgtggcttatatataggtgcagctgtgctttaggcccaaatgctagtggctagcgcatgtaaatgggcgaagtctaaagaccgaagaggtcatcatgagtcttcacccattttatctgaacagctccattgggggtatttcccggtgggtaaatttcttgattttctcattcattggacttttggatctgagatgtatgtggatatccaggtatacatacatctcagattgaacagtgcctacatgatacatctccctgtattatctagcggttatagcatcattaatccagatttagcaaatgagtagtataacttatgttattgacaagattgacaactttgtagttgtcactgtttttatttgagagcatttctgcacccggaaaaacatgtattggactggacttcatttttggagctctctggattcatgcaaacttgattcttcattgtttctctttgggagtcctagaatgcatccatcccacgtgaaggaagtataagaagcaattaaacaagattctattaataaattgtgcaatgtaagtgtcctaggaaatagatattgatcagtttcagtttttttctctcaatgaaacaatgggaccggctgatctgactacttaggtacattacaatagaagttgcagaaaatttacaggaggaactttgtatgaatccacttcctagtccattctgaaaattgactcaaattgagctcacttagtttgcatgacaagcagaactaagcttctaactctattgctgaaaatggcataaaaaaaacctggttataaataggcaaaatttgctacaggacactgaaagattgcggtctttgctgtgagacacccaaagatcgtgaatctttttgtggacactgtaaaaaagtggtaattagctgctggacacttctcccattattttattatttccggtcaaaatggagagggaaagagttgtgtaagtaccaaaatacccctgctctcttttctttcttttccccttcttcttcctcgctgagccgagcagaggcgcgacacgcgcggccggcctgagccgagatagctcggccacggcggggcggcggcgcatcgccggggttcaccaccgacaacgaggatgcacggcggcatcccggcgcatggcgcggcgatgcacggtggcaccgagctctcggggagctcggcggcggcgcaatggcgaccgggccggcagggatacggcaggagctcattgatagcgattagggtgttgttgatgtagcagaagccactggccttgcacgcggacgcgtggtgcatgccgccggaccagttgatggtgatttcgaaggcgccgtcgacgagcgcgcgcgccgcggcgagcgacacgccggcgtagccacaacaatacttccatacttccagaggcggtcgaaggtgggcaaatcatcgtcgccgccgagtaaaccaatgccgtggtcatcctccgccttctgccgaagcgcggtgtcgttgacgtagctctccggggtgaggtcgtggaggaggtccgatgtcgccgccgcgtccgacgctgccgtgaccgccgcgtaggccgtcgtcaggagccctgtgatgagcgtgccagagtcgatgaccatgccgctcgagaacgccgacggcgggatggcgagcggtgccccgccgacgctgatgccggtgagcgtcatgacgtagaacgtcggcaccgaggggatgcagcgcatcggcgtgaacgagaagccggctgctgtgttgctaccgttgggcgcgccgagggcgaggaacccagtgccgccgctcgtcggcgagaggcagtacgagaagggcccgccgaattgggaggacgtctcctgtctccgacacgagcaactccggcgtgccaccgagaccgaggaggctgtcgaaggtgaacatcggcgccgcgttcttgaacctggccacacacagcacgtcgcccacgcagtagcggtacaggccggagtaggtggtgacgacgagctcgtactcgtgtccgagcttgacgtcgacgaggtcacagtggtcgggctccggggtggcgacgtcgttgccggagttgatgaggaggaactcgaagtagaacactgttgggatgagggtgtaggcgacctcgctgggcttgcacagggggttgaggttgagaacgtgctggtggtcgacgcagcactccagcgttccgctcggcaaaagcgtcgcgttgctgtcgaagaagaacagagaaagagaggaagaagaacggagaaaaagagattgacaagtgggtccatgggtaaacttgtcttaaaccaaaatttctctctccgttttcatcgaaaataataaaataatgcgactggtgtccaccagctaattaccacttttttagggtgtccatgagtaaatacacgatctttgggtgtcttacagcaaagaccgcaatctttcgatgttctgtagaaaattttgccttataaatatagtgctacattttaaagtttcaagtgaataggcaattctgacaatccgacaagattgaaaagggacttccaagtgattgcatcattgtaatatttcctgacctaattatagtgaccaaaacaaccaagtctgtccgtccatgcagtttttaagtttatgctgtgtaatgatgcagtgatagataccatatataaagatatagtgactatgttgcaattatttaatctgcatatatgacttaaccctcatggtcgtgcaactttccaggtttcagtaaacaagttacatcctccttctccccagacatttcaggtacatgaaagacaaaaacacatcaacatcgagaatatgaagatgtatgattttgaaatatggaagccagagaactctgctaaggtcccgaagaacagcattctgagaaagcatacaaagcgctcctctttcactgtcagcatcaacaaggagaaatgcagcaatctgaaagggtcagaagccatagagctaagccacaagttggggaagcatgttacattctcaggggtggatgacatacatattagaaacaagctaagttccacgttaccccaactgcaaaaccactgcaatgtgtactcagacaagtctaatgaagctgacagattagtatctgcaaaaattagttctcatgagaacaaggaagcctcaggtagggatatatacgacagatggacttctgaatcaagtggtgcaaaggacccaattaacttgattgatctgaatcgcacgctcccatgtattcccgattttaatggcgcattcatttctggttcagaggtgcctgatcttgagcatacggagaatgcaacttctgatctccaaatacctggtgatgtaagagaagaagctgttcttaagcacaatcaagacctccattccaaatcaccgcgatcgcagtgtgaacttaacagttgtgatcttgggagaatcattaacttaagatcaatagcctcactgttgcctgatgaagcaattaacatttctgacagaggaatgattggtcatccattgaactcaacagaagttaataagttttatgctgattatgagagaagttcagtaagagatgatactatggaaggaaaggctccttacatattgcctcagcatacagttcagtacacaagtcagtttacggagaattggtacaccaatatgaatttgggcaactttcatcatgctggaagagaattttcttcttgtccatgtgaaaaccagctgaattctgagaaacccatgttacattctgaaatcaatgtgcaacatgagcatgcagttatgtcacaacgtaccatgcgtctgatgggaaaagatcttacagtttccacaacaggtggcaaatgcattggtgagacagcaaaggtgcatgtgaactcctctgtcagctgccatcatactactaatattttcttagagttgccacgacaaggtcacccgtttctgtcactgcaatcccgaagtttttccaatatacaggtagatgccccaagcacaagccatgattatgttggatacaaaatgcataatttaaagcgtcgttttccggaagctgatgttttctctgggaatggaatcgaatgcgaagataggttgagggacttttcatatttgcactgtggccaaaatgcgcttgctggattttcacctcaaggaggaaaatacaacacaagatctgatcaaaactcactgtctgctacaacattcttgcctaccttcataccacatgccaagcagtcagcagtttaccgtgccaattcaacttggaaacataatccctatcctgcaaacttactagttcatcctcctgatggtacaaattttagaaaggatcaaaaccagataatcagaggagttgcagagatcccaagttctgtaaacaccatgtcaagagatactgtttggaagacgagaaaaatagacgtcgacaattctaacatttcttctggtgtcaggtatatttcaaggtctggtccggtgaagctccgccccggggcgaagcatgttttggagccgagacaagacacagatgatggcaattatccacctatgtattcatgtgtaccgtttttcgttataagaaggggtggaaatattttgtctggtcagactaaaagtcatagaaaggtctaatttgtagcccatcagatgaatcattcggattatattttgtcccaatcaatggttatggctcaaacttttctcaagttgatgaacagtgtgcagctagttctggtcttctttgacccatagtttgctgtactagagccctgtgaaaagaggactcaattgatttgggaggttcttacttttgcgtcgacgcatcaagcattacatccatcaagtttacttcaacagaatcctggtggcaagttaccatttccatgtaagtaattactaatgagattgcaaactttttcttgctctgctggtactaacttggttacagaattttgcagcttgcctgatgccctgatgaccctgcacctgctatcctctgtgcctctctggctatatcctcctctgaactggaggtttttgtgttgaattatttaggttcagagatttagaaacatttatggattgggatagctttggcataatacaatttttgtgtagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0203900, RefSeq:Os05g0203900