Os05g0230900

From RiceWiki
Revision as of 10:12, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0230900| Description = Similar to Glyoxalase I| Version = NM_001061512.1 GI:115462754 GeneID:4338161| Length = 6079 bp| Definition = Oryza...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0230900

Description

Similar to Glyoxalase I

Version

NM_001061512.1 GI:115462754 GeneID:4338161

Length

6079 bp

Definition

Oryza sativa Japonica Group Os05g0230900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:7971411..7977489

Sequence Coding Region

7971782..7971826,7972645..7972785,7973041..7973148,7975628..7975675,7975764..7975976
,7976765..7976829,7976934..7977058,7977359..7977489

Expression

GEO Profiles:Os05g0230900

Genome Context

<gbrowseImage1> name=NC_008398:7971411..7977489 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:7971411..7977489 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggcgggtcgtcgtcggccgccgcggcagcgcaggtgatcgggcaggacgaggcggtggagtgggtcaagaaggaccggaggcgcatgctccatgtcgtctaccgcgtcggcgacctcgacaagacgatcaagttttacaccgagtgcttggggatgaagctgttgcgcaagcgcgacattccggaggagaggtataccaatgcttttctcgggtacgggcctgaggactcgcattttgttgtggagctcacttacaattatggtgtggaaagttatgatatcgggactgctttcggtcacttcgggattgctgtcgaggacgttgcaaaaacagtagatctcattaaagccaagggaggaacggtaacaagagaaccaggacctgtaaaaggtggaaagtctgtaattgcttttattgaagatcctgatggttacaaatttgagcttatagaaagaggtcctacacctgagcctttatgccaggtaatgcttcgagtgggagatcttgatcatgctatcaatttctatgagaaggcatttggcatggaacttctccggaaacgagacaatccccaatacaagtatactattgcaatgatgggatatggtcctgaagacaaaaatgctgtactggagttgacctacaactatggtgtcaaggaatatgataaaggaaatgcttatgcacagattgctattagcacagatgatgtctacaagactgcggaagtcattagacaaaatggtggacaaataactcgtgaacctggcccattacctggaattaatacgaagataactgcttgcacagatccagatggctggaaaacagtatttgttgataatgtagattttctcaaggagttggaagaatga</cdnaseq>

Protein Sequence

<aaseq>GGSSSAAAAAQVIGQDEAVEWVKKDRRRMLHVVYRVGDLDKTIK FYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVVELTYNYGVESYDIGTAFGHFG IAVEDVAKTVDLIKAKGGTVTREPGPVKGGKSVIAFIEDPDGYKFELIERGPTPEPLC QVMLRVGDLDHAINFYEKAFGMELLRKRDNPQYKYTIAMMGYGPEDKNAVLELTYNYG VKEYDKGNAYAQIAISTDDVYKTAEVIRQNGGQITREPGPLPGINTKITACTDPDGWK TVFVDNVDFLKELEE</aaseq>

Gene Sequence

<dnaseqindica>5664..5708#4705..4845#4342..4449#1815..1862#1514..1726#661..725#432..556#1..131#ggcgggtcgtcgtcggccgccgcggcagcgcaggtgatcgggcaggacgaggcggtggagtgggtcaagaaggaccggaggcgcatgctccatgtcgtctaccgcgtcggcgacctcgacaagacgatcaagtatagaaaacgaaaaaaaaaaaaaaaaaaaactacaacccgtatagttgttaattaaaagagtagatttcacttggggtcaccttttattaccgatgttttggatcatcttttaaccgatgttttcactttggatggggtaatcttacctttatgccactttggggtactttggttagaaggttatacaaagcgaaacttcggtaataaaaggtggcccaaaatgaaatttactcccaactaaaatttgctctggcgtctaccatagtgttagccttgaattgatttgctgttctgcaggttttacaccgagtgcttggggatgaagctgttgcgcaagcgcgacattccggaggagaggtataccaatgcttttctcgggtacgggcctgaggactcgcattttgttgtggagctcacttacagtaagcttctacagtccaaatgctgttatcatatgtttatacctcacatagtgtgcgttatctgttgtatccgtgcaagacccctgatgtacatctattggcagattatggtgtggaaagttatgatatcgggactgctttcggtcacttcgggattgctgtcgaggacgtaagattctgctgcttatcttagtatttttgttgagtagttgagttgtttgacattcagccctgtgtgtataactgccacttccttcaactgggcatgctttttttctttttggctactcaaaaagatactagtcccttttgcttgtagaatttcaagctagttcccactggtttttaggcttaaattttttaccagacctatccatgtatcatccagataagatttctctcaggggttgtgacttaataatacactttttttcttatattttgatgcctacaactaattggcttgcttagttacgtaggggttagtgtgattcttgagtgccataaaaccttaaaccaggtgatctggcttaaattgctttgtccaaattttcattgaaccatgtagtagggaactagttgaaaacaaatagcctttttaggatgctagattttggcatgattaatctcatcatgccaaaccccatacaatgccttcttttcttccatggagatggcataaaaggtttttcataacataacaataacttactcatgttttcagttcacacattgagggataatcttccctttttcattaatagtggtaaaaaatgttactctggtcatgcaaacatccaagaataatgtaatctatttttgtgcactggataagactagagttttaaacatgccatcagttagtaatgtatctgattataggttttaatattttgcctttgcaaagatggatatgtgcttggttgattgataagtttcattacaaaaaacttgtaggttgcaaaaacagtagatctcattaaagccaagggaggaacggtaacaagagaaccaggacctgtaaaaggtggaaagtctgtaattgcttttattgaagatcctgatggttacaaatttgagcttatagaaagaggtcctacacctgagcctttatgccaggtaatgcttcgagtgggagatcttgatcatgctatcaatttctatgagaaggtaaacttattgtctttaacttgtagtatttggtatttatcataattattcattcagcaactaatctgtactatattttcatcataaggcatttggcatggaacttctccggaaacgagacaatccccaatacaaggttggtacttttcaaaaccattgcatggatttacctcgtgacactcatggcttctgtttgccctgatgctttctaatgttatgctctactacaaagtactagaaaaacattcaaaagagcttccatcaatgtacctcatcacctccattgctatgacttctgtttgtcctcatggcttctgtttgccctgatgctttctaatctgatccttgcttaagtgagataaggaaaaacatgcactactacctcgaaatatgagaacatgttaaatgcactttttgtttgtaaactatttgcttagttccatatcttatacagtggtatcctgacttacggagaacatgttaaatgtagctattatggttgtatcctgatttttgctacattcatacactgggttcagacttcagacttgggtagtaggcatggtattgataaaaccgaagtgatagcaagttccgcatgtgcatttactggttgtttcattatacatgccattgtttcttatatttctttctagagatgggaacttcattgtttttaggcatcattttctggtgttgacaagcctttttcttttcttttgaaatcttagtctcaagcatgttgtgccatctggttttctggtaccttgtgcatagggttgatcacaaactttgtctgttctctgtcaggatatcttgtgtcatgtttgtcttattcttcgtattcactcatgaatctggaaacaaaatatacttctctggcacagttgctatccaagctatggataagggtcactgtcaaaaggactagaaccctgtgatccgatattattacagtccaaatgcttgttaactttcttctgatgagttattatgccactcattcgtgaaacaaagtttcagattacctttttttccctatattactcatctatatgcattgaacaaatatcaaatttctaaaaatataagggattttggccctgttcgtttgtccacaaatataaggggttttgagaacccggggagtgaactacagcagacaaactcagccttgcattcaatccccttacctttttgcacttttattatcctgaaatgttgccaatccaaacttgtcccccaccttttttaggggcacatgtctttttgtttctaccttaatttctgctaaacttggcaaaatcaaattgtggaggaagggagtatatcttaagttctaaacttacaaatgtaaaagtgattgtcttttaatctagaaactctgatgcataatttacactggatatgcaactacagatacaaatgatgcaagacttaacaaaaaaaaggaaaaaaaatccattttactccctcaaactatttcaccggagcatttaatcctctgaagtatttttttttactcattttacctcctgaactactaaaatcgacctactttactccttaccaatgtttctctattttgtttctccttatacaaaacaatagtcaaatacccgtgcattgcagcagattatagaaataaaaatattgagtccattttctgaaaaaaagaacttgtttgcttctgtttggttgaaacaaaacgcttcatctttaagaaacaaaaagaaaatgtacatgtttataggattgttgttttccaaagtgagacataaaaccttcaatgcattttgacatgaataatgaaacacgtattaataataaattgtgcagtgaactactaataaaactaaaatgtccttgagtttttcacttgaatcaaggtgaaaaagaagcaaactattagagacaacacagtgagcatagcactcatttgtgtactggtctcatagcctggtggccccatacatcaggctgtcaggctgtgagaccagtaaggggccatagccaccaccaccaccaccaagcaatatagatgtgttaagttgtaatttcataataagtatatatgacaacataaccttgcaatttcatagaagcatatatgatagcgaaacctatgttaaaaaatattttcacttttttttcatgacagtccacacagggttttagagaatatgctacagctgcttggcgttagtcatgtcaaattgatgcacgtataacaaataaaaaatagacctcaaagtattttctgttactggttttcaccacaacaggttttgtctgtcttgaatgatcttgatatatactccctccgtttcataatgtaagactttttagcattgctcatattcatatagatgttaatgaatctagacacacgtatatgcttagatttattaacatttatatgaatatggacaatgctagaaagacttgcattatgaaacggaggaagtattatttttgttatatctagatgcttacaattttgtctgttaatattttgcaaccaaatctgcatgtacctaacccttttggtcatagcctatgatttccttatgtgatttataactattagaaatctaattgtatcttttctctagtatactattgcaatgatgggatatggtcctgaagacaaaaatgctgtactggagttgacctacaactatggtgtcaaggaatatgataaaggaaatgcttatgcacaggtatattatatttgagtgtttagattggatttggaagtttctcttctatactgtgttagtaataaaaaaggatctatgtggaaatttctgattgaatatgatctaaacaacggggatcacttgccattcgttggttactagaagcatccgaaagggtttgggtcaaatatgagtataataggagtttcatttcatgagggttcatccctcgtatttacattacagtcgtggagtttaatttttttacccttccagattgctattagcacagatgatgtctacaagactgcggaagtcattagacaaaatggtggacaaataactcgtgaacctggcccattacctggaattaatacgaagataactgcttgcacagatccagatggctggaaaacagtatgtactatttctttttgtttgagaatcacagctctctcgtgcatgtgtgtgtgtgtgtgtgtgtgtagataagggggtcataatttttgctaaaggttgtttgttcttggctgtttctgactgctccatatgagctttttctgggccatttacactttatggcgataaactttccatgataactaaacttggaagaaatttgttgctattttgttggtgtgtcttgaataatacatacgcaccataaaatctttagtgattctcactgccctagaaaaaaggatatccaattagtttattaccatgtatacagtaaaggcatatttaagaaaattaacattattctttgtgtaatttgagaacagaaattgtacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatctagatatatgtctagattcattagcatcaatatgaatgtaggaaatgctagaatgacttatattgtgaaacggagggagtagtagtttttttttattgtactgtgtacaataatgatgaattagaccaagtcaactgttctgctgacctgccatgaatattccccatcttgaaacaagtatgtgaagtagtcgtacatgtcttctgtgcgattttatgatcttcagaataataatactcctaagtacatttgtcagaaaaaaaagtatatgcatatgcattattagtctgttgcattacatattttgtgccatgcctctattttcatgaagaacccgcagtttcttccgtctgatacattaattaccataattgcaggtatttgttgataatgtagattttctcaaggagttggaagaatgagtttttgccaatgatctcatcttggtacaggattcagaggtttttccccttgatttgacatcttgcgcccttgaaatcttgtaaaagccacaccacctcgaactgaggtttgtagataggccatgcaaatctaccattccacagttggtagtttaatagagcattagattacaacattccaagcgatgtagatgcgcaatccattttgttagcgaagtcaaatcatatgtacaaattttgttttccgggtcagaactattgttcttaatcaatccattttacattcgaaagttagcattcctgctgtaggacttcttgtcatttgtattctatgtcatggaatatgaatgaatggtggtaagtatggaatc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0230900, RefSeq:Os05g0230900