Os05g0248200

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Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0248200| Description = Glycoside hydrolase, family 18 protein| Version = NM_001061557.2 GI:297604130 GeneID:4338213| Length = 1164 bp| Def...")
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Gene Name

Os05g0248200

Description

Glycoside hydrolase, family 18 protein

Version

NM_001061557.2 GI:297604130 GeneID:4338213

Length

1164 bp

Definition

Oryza sativa Japonica Group Os05g0248200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:8992849..8994012

Sequence Coding Region

8992908..8993801

Expression

GEO Profiles:Os05g0248200

Genome Context

<gbrowseImage1> name=NC_008398:8992849..8994012 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:8992849..8994012 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctccgacgccacgcggcacttctctccttggcagtagtactactgttcgccggcctcgccgccgcgtcgccgacgtcccagaacaccggcgacaccgtgatcttttggggacggaacaaggacgagggctccctcagggaggcctgcgataccggcctctacaccaccgtcatcatttccttcctcagcgcctttggctacaagcccgggtactacaaggtcgacatctccggccacccggtctccgccgtcggccccgacatcaagtactgccaatccaagggcatactcatcctcctcgccatcggcggccaaggcggcgagtattccctcccgaccccacaggcggccgttgagctgaatgaccacctctggtactcctacctcggcggccaccgcaacggcgtctatcgcccgttcggcgacgccatcgtcaacggcatcgacttcttcatcgaccagggcggcagggagaactacaacaagctagccaagctgctctacgcgcacaacaaggactaccgcggcacggtcggggtgatgctgacggcgacgacgcggtgcgagtacccggaccaccggctggatgaggcgctggcgacggggctcttccaccgcatccacgtcaagaaattcagcgatggccggtgcccggcatcgtcctggatacagtcgttccagaagtgggcgaagatgtacccgcagagccgtgtcctggtcggcgtcgtggcctcgcgggaggtggacagggaggcctacatctcgccagaggacctcaagaaattgatgcagtacgtcttcagcaagctgcccaacttcggaggcgtcatggtctgggacaggttctacgacgagaagaccggcttcacgggtcgcctgcgagcgtaa</cdnaseq>

Protein Sequence

<aaseq>MALRRHAALLSLAVVLLFAGLAAASPTSQNTGDTVIFWGRNKDE GSLREACDTGLYTTVIISFLSAFGYKPGYYKVDISGHPVSAVGPDIKYCQSKGILILL AIGGQGGEYSLPTPQAAVELNDHLWYSYLGGHRNGVYRPFGDAIVNGIDFFIDQGGRE NYNKLAKLLYAHNKDYRGTVGVMLTATTRCEYPDHRLDEALATGLFHRIHVKKFSDGR CPASSWIQSFQKWAKMYPQSRVLVGVVASREVDREAYISPEDLKKLMQYVFSKLPNFG GVMVWDRFYDEKTGFTGRLRA</aaseq>

Gene Sequence

<dnaseqindica>60..953#acctagctcgctcgatcatttcatttctcgaggcaggcaagctagctaagattcgatcaatggcgctccgacgccacgcggcacttctctccttggcagtagtactactgttcgccggcctcgccgccgcgtcgccgacgtcccagaacaccggcgacaccgtgatcttttggggacggaacaaggacgagggctccctcagggaggcctgcgataccggcctctacaccaccgtcatcatttccttcctcagcgcctttggctacaagcccgggtactacaaggtcgacatctccggccacccggtctccgccgtcggccccgacatcaagtactgccaatccaagggcatactcatcctcctcgccatcggcggccaaggcggcgagtattccctcccgaccccacaggcggccgttgagctgaatgaccacctctggtactcctacctcggcggccaccgcaacggcgtctatcgcccgttcggcgacgccatcgtcaacggcatcgacttcttcatcgaccagggcggcagggagaactacaacaagctagccaagctgctctacgcgcacaacaaggactaccgcggcacggtcggggtgatgctgacggcgacgacgcggtgcgagtacccggaccaccggctggatgaggcgctggcgacggggctcttccaccgcatccacgtcaagaaattcagcgatggccggtgcccggcatcgtcctggatacagtcgttccagaagtgggcgaagatgtacccgcagagccgtgtcctggtcggcgtcgtggcctcgcgggaggtggacagggaggcctacatctcgccagaggacctcaagaaattgatgcagtacgtcttcagcaagctgcccaacttcggaggcgtcatggtctgggacaggttctacgacgagaagaccggcttcacgggtcgcctgcgagcgtaactggtcgcgacatttgaagcccgttaattccttactatgagatcaataaaaaagcttttgtggagtactccacaaataaagtcatgtaataataaataaacatattgtgtatactataaagatttgtgtgttgggtaatgtatgtaatcaataaataaagcgaggtacgatgatacctcgagtaaaataaataaagagctttgagattaat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0248200, RefSeq:Os05g0248200