Os05g0267100

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Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0267100| Description = Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein| Version = NM_001061581.1 GI:115...")
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Gene Name

Os05g0267100

Description

Cellular retinaldehyde-binding/triple function, C-terminal domain containing protein

Version

NM_001061581.1 GI:115462892 GeneID:4338246

Length

9173 bp

Definition

Oryza sativa Japonica Group Os05g0267100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:10548538..10557710

Sequence Coding Region

10548802..10549047,10549321..10549506

Expression

GEO Profiles:Os05g0267100

Genome Context

<gbrowseImage1> name=NC_008398:10548538..10557710 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:10548538..10557710 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaactctgcagatgaacaagaagaacatgttacttggctgatagacctcagaggctggagtatatcaagtacgccattatcgacatcccgtgaatccatgcacatagttcaaaactactatccagggattattgcagtagcaatactcagcaacactccaaggatttttgaatctttctggaagattataaagcacttcttggaagcaaagatgagcgagaaggtgaagtttctatatactaacaatccagagagccacaagatagtgtctgaaatgtttgacatggatctgctggagactgcatttgggggcagaaattcaattaccattgatatagacaattatgctgagagaatgaggagatcagatcttgcgagaggagttttaatcatccaaacggacataaatctgattagtcgacatcactga</cdnaseq>

Protein Sequence

<aaseq>MNSADEQEEHVTWLIDLRGWSISSTPLSTSRESMHIVQNYYPGI IAVAILSNTPRIFESFWKIIKHFLEAKMSEKVKFLYTNNPESHKIVSEMFDMDLLETA FGGRNSITIDIDNYAERMRRSDLARGVLIIQTDINLISRHH</aaseq>

Gene Sequence

<dnaseqindica>8664..8909#8205..8390#attctaaaaaccacaaactagctaggtaactctggttttttatcgctttctgaaactaggtggcaagatatatacctattctgaagcaatgagtttcctgctgaagactaggagtgaatctgacaagccgaagtcgccatcttctgaagaactgcagcaaaaggtaggaataacttaccagtgatccttctgtataacttataggtcatgacaaataacaaatgcagtagaagttactgcttcaaaagcattagccatttagcatagcaagaaaacgaacggggcaaagagaattggggtagtgattgtttcttgcgtaaattaatttcagcaacatcccattttttatggtcgaagtatcacgtataactccaagtatatggttttgaagttttgttaaactagttcaaccccatgcaagttgagcatgcatttacttcaaatttttaaatagaatatacataaatattttaattactgatttcttgtttacagctagctgttgggttaactcttcactgctttgaattattttatttcagatatgctaatatcaattgagatttgcatagggttttaagaagcattagaccatacgctaggttcataatatatatagtcttcgggaaagactaaaatcggcatccgatttttccgaaaaaaattggacgttgttttgctactcaaaaaacatgtgtcaaatgattaaaacaatgaaacaaatttgaacaattaccgaaacattttagtataatatatgaaacctcaaggttcaaccaccaacaaatccgcatgaatcaacaacaaacttacagagcaccttgaaaaaccacattgcaacatttcgattcaatacaaagaaacatcaagttacaccagttgaaaaatcaaaaaatcacgctcgttcacactattctcgtgcttctctccagcgcgctaccagcggtgagccattgatatccacgccgacctcctcgagcatgagaaacgaagaagagccgttgctgcctagctatattggtgaccagaggtcgccgcatgccatcgccttcacagcatttgatgccggtcaccatgttgttgtcgagcgccatcccctccctctccatgagcatcttctatggatgctaaggtgggccacgtgctcaggacgtacagggagagaacatgagatgagatatgggtagaatgaatgaacagagatggatgaaagtaaggttttctctttttatctatagattgaatgggggagatgcgatggcccaaatgcgtgcgaatgtgggcgctggatttttgggctcatgctggccgcttgcgtgggagatttagggtgcgctttcagtctataggattagattcttatcgtttttcgttagcacgcttttcaaactgctaaatgatgtatttcgtgggaaaactttctataaagaagttgtttaaaaaagtccaacaaatttattcatcaaaaatttatatattaatacttaattaattatatgttaatcacatttctcgttttacattcggctaatcagcccatcctatctactgaaacgagcacacccttattctagtcttctgcaatttttactataatacatagggtttctaaaatttacacttaaattagacataaaagagccctccggtgcagtgatgtgcacatttatcttttacttttggaatggtgacatcttgtccgcgtatttcatttgttattgtcccgaacttctgcaaaagaccaaaagaacctcggcatcattaaaatctaaacgttcaaaaccatccaattttcaacctttttggtttggattcactaccagaaaacttatctttttatctaataccccaaaccacaactacaccggatatattaagaaccaatactaaaaaactctttagtaccggttctaaaagcccaagtctccgaaatatatttagcaccggtttgtgttatcaaccggtaataaaaatacatctttagtatgggctggtaacactaaccacgactaaagttgtctttaggattagttaaaaagaagcatcactatccaagttagacgtgtgtagtaggtgggatggtaacgtgtgtgaaaggctgagatcatgagagatcttgagtctaaatctcacatcccacatatttttttgccttagtatatatctttagtaccggttcattctaccgatactataaattaaataaagaaccggtactgaagatcatatctctcctagcgattaacataactcttgatagtgattaacaaatataactctaatttagcgatcacgcataaggatgaaagcaatttcaaaatttcaaaattaataaatgacttcaaaaactcctaaaaaattacccttgctataaagtatttatatcctacataaatgtgtgcttaaatctaaaaaaattttattcctacaagacaaataaactttgttttgttctagaacaaatttatgtgcatcttaaatacggttttgtggaatttctatgagactatttcagctgtaggaatgcactgtgtgagaggcacaggtcactggtggagaaaccttttttactcccagttggtaaccccctttagtcctggatttccaaccaggagtaggaatccgggactaaagatgcccatctttagtcccggttgaaataaccgggactaaatctttagtcccggttggtagcaaaaaccgggattaaagagaaagttctttacaccaaccaggactaaagagggatagcggcagtctagatggtcccttttcttttttcttgtttcttttttattttctcccgaatcgggtggcattcacatcccaaatcaaaccccaaatccccaaatcaaagtaacatcccaatccacatcacaaatcttaaagttactaacatacacaaatcaaatacatcacaaatcctaaaaaaattacacacaaatcaaatacatcacagactatacatctcagacccatacaatccatcacaaaattatacatattagtgaatcacaaaatatataaaaaaaagaaaaaacaagctccaatcacggcgccactactaccgcgcgcgccgtgcaaccgcacgtcacgcgcccgtctatccaccacgcgtccgcgcggcgcgcagcctccgtcttcaagggagggaggaggaaggggaggggaggggaggaggaaggggaggcctggagacggaggaggaaggagggcctccgtctccaggggagggaggaggaaggggaggagaggggaggggaggaggaaggggaggagggcgtccctctccaggggagaggaggaggggaggggaggggaggggaggatctgagtggttgcgattgtggaggagaggataagggatagggattatatacaatgtgttgaattttactcccggttggtaataccaaccgagagtaaagatctacatgaaccaaccgggagtaaagtggcgatctttactcccggttgatgtcaccaaccgggagtaaagatcctcgccccctgacatgcctctgacacggaatgaaccagcactaaagaccatatttagtctcggttggtaacaacaaccgggattaaatatcatataatagctgtgcggttttcaaccggggctaaagatcatttttagtcccagttctttttgaaaccgggactattgtggttttgggtcgacccagcaaagatcatttttccagtagtgggtgtggtgcacataaacatggcaagcggagaaggttcagaattctaaatcctttacatatgtataaaatattcccatttggatctaacccaacccacgaagtttttgcatccaaacacttaaaaaaaaggataagatgacactaacccaactcatcaaatccatcctaccaaacacatccttggtcattggtcaaggcagaagtcctatattacacgctttagccatgcagcagccagctggttttatatcggactgctcatcgtagttcgagctagactgatatcgtaaaaaataacgaagcatctaaaatcattgatgcataaacttttatatttatattgttagcagtttcaaaccaatgctaaaatatgtactatgataaacaaaattaactaaatttaacttttacattttgactgcaacagataatccttttggtttagatttcccatgccacataaaacaatataagatattgattattataagctttttcatttgaatttttaaagaaacttttatatcataagtttttttaataaaacacaccatttaaaagtttaaaaagactgctaacagaaaatgagaaagttattgtttggagttaaaaaaatcgaagcccaagttgtaccagattttccactttgcagttcttactatactaccaaactgttatgttgtattatacccattatacaaatcttttttattggtgcagcaaatgatcaaatattaaataagaggtgcaagggtctctttgatttgtatgaaaaatataggaattatggaggatttcaatcctataaaaaaaattcctatgaagtcttttaaaacaatgattgaatcatattctatcctttgaaattcccgtgggatggacagttctataaagattttagatgaaatttagcaaaaacttcaacctcacgaaaaaaatttctaaatctaattctctcgtctgattcctacattttttctatagtccaatcaatcggttattcatgtgtttttctaagtttaataatcttctatgtttcaatcacaaaaatagaaaaacagagaaatatgaaaaaaacttaaaagttgcaagaaatcaataactagttcaggcaatcaactctggctacaagcctacaaggctacaacagatgaaaacaacatgcacaagttatgtttggaaaaccaccgatcccctgcaatgctgacagattcctggctgctgagagggaaaggaagtggtcacctttgctgtagcgccacatgaaagtgtttacacccaaatttggcacctatggacgaaatatggaaaaattgccaaagtttggaaagtgccgggtttccttcactagggccggtcagaccacaggtatgtgggcggtctgaccggctagtagggccggtcagaccaatggtatgtgggcggtctgaccggctagtagggccggtctgaccgcaggtatgtgggcggtcagaccgtcagggtccgagtccgagtctgttttcgtcgggtctcgggtttccttactcgggaaagcatgtttcgtgtttccattggtttctatcccgaattagacgtggagaagggcctgtagagggcaagaccaacccctatttaagggacaaggccggttcattgtaaaacccccgaatacaatttatttgaatcgttcttttactatgtttttttgtattttaccctagtttagtcgatctttgtcggtttgcgccgtaaaccgtccgccgccgctgcgagagtgcgacacctcttcgtaggtttgtcctgaaaaccttccattttgcccacgagatgggtagctatcctcatatcgatctaaatcggactagaggctgattttgatctctaaatcggctccgctagccggtttagctgtttttctacaaaacccatcttgatttggccctttggctagatcgaggtggttggcgactccatatcaccgcaaggcgtttaggtgttgcgatcgtgcttgtcgacttgtcaaaaaagttgccaacagaaaagattagtaatactagccgttatagcagcaagttatgttgcgatggttcaggcagacagctacatgattcacagtacatctgaaattcggtgaagttcggcaagtttttttgtagagggcctgatgactgtagtccaatttctagtatgaaaaatagagcccaacaaggttttccagcaatttacgactcatatattcctatagcatgtggattctcgtgtgtttctaacatataattccagatgataatcgttaaaaatcacatctaaaagtaataaatagttaaatatctctaattttgtagttaaaacttatcacacaagggtggtaaacgatagctgggttgaaactgaacacaaccacttatccataggagtgcgttgtcattcgcaggggtggatgaaatgttttccatagaccgaaatatttttaccctataaaatatttgaggactaggtaagctcatgaaaaaacccattaccaccaccggtcatccagtgatattatgccatgcataaaacagaaattttgaccactaacccttaagccaaacagcaccatatatacacttttaatagtccctagcagtggcagtgaatctgtcacctatatataactgtttttacaaattggctcctgaatattatggaatagcataaatatttcgttcaaacaattaaaaaagttgtactaacatatttgacaattttttaatattatattatattttatccatagcaaatcattggtatttttctagtgaaccaaaaagctcccaaccacagtagacttcatcatttcacttattgacggaataagcgaaacaccatatttgcaaacggaaaatggtttgtaaataaaacttttatatacatgttcttagccatctaaaagtaaaggttgaaaaataaactacgatgaaaaccctaaaatcaactccaaatttaaggttgaaaatttaaattttgtcttataagaacaagtataatccaaaatataggactagcatagcatggcacaaagggtttggttagccagaaggcacggtgtggtggtacaatgctgccacgtcatagtcaatgggcatagcatcactttactactatggaatgtccagcttcatggactattacaatatgactatttttggaatttcaaaacataaaaacaaaaatcttaaaccagtattaaggcatgtacaacagtgcttaattattaacaggctctctccgttactatgcaagtaaatttggaaacatggaaggcagagagaagaggaaaaagaaacatcgttgtaatgcatgacaacatcttagagtcgactcttagcaattattaaataaaattttgttgcatgtggatggagaaaaggaaacaagagtaataaaaaaatattttggtgcattagttgttaatatgttttcttatgtcaacaattgttgcccctaggatttcttttttgttcttctcgtgacttgccactagcattttcatgtgagttctgactgctttttgatccagataatttgtagggcaggttgtagttttgggctgtcaataccaactcctccttcatattttcacttctatagttatcgtctaaaccttatccctaaattaaactattttgttctggttgatgtgcacctgaagatagttcaagtccgggaactcctgggaagcctggcagctgagatgccggcattcttatcagacaccaccatccgccgtttcctaagggcaaggaactggagcacggaacaagcaaccaagtcgctcaaagaaactgtcaagtggaggcgtcagtacaggccagaaagcatttgctgggtgctctcacaaatcccaaatcaacccctttgttgagtttgtaccaattgttttttctaaagcataattgtttgtaattattatgttttggacgacattgctgacaaggagtatgagggtaggagagcatatatagctgactaccttgatgccaaaggaagatctatactaatcacaaagccgacaattaaggtcagatttttgctgactacaggatatatatatgccggtctgactgtgataacaatccactagtaatttggagcaaatgaaatgattcaagtccccggttgaaaaaactaaagacgttctcgaagaaaatcaatgaatactaacaggatacaatgccaacttaattaggtgactgaaagttaacttttctgtagaattcagaacctcagacttgcatgactacaaaataaagttatatttctgcagttctcttaccaacagattaccatactaggggtggcaaaaagtgctgttcttacagttcaagttgaatacggtttttattatgtatgatgcgtttatggacaataaaattttgaaggtttctaatgttgacgaattagcaggggagagtttcagggaaggagcagataaaacactttgtatatctcctggagagtttggctatgaactctgcagatgaacaagaagaacatgttacttggctgatagacctcagaggctggagtatatcaagtacgccattatcgacatcccgtgaatccatgcacatagttcaaaactactatccagggattattgcagtagcaatactcagcaacactccaaggatttttgaatctttctggaaggtactatgcaatattcaggacttctatttactcttactaaatgatgttctgtgatttagttagtgaatatatgtactacctccgtttcaggttataagactttctagcattgtccacattcatataaatgttaatgaatttagtcacacatatatgcttacattcattaactggtaataattaacatatctatgaatgttgacaatgctagaaagtattataatatgaaacgaaagaagtatgaactagtagttgtcttgtcctcatttgcagattataaagcacttcttggaagcaaagatgagcgagaaggtgaagtttctatatactaacaatccagagagccacaagatagtgtctgaaatgtttgacatggatctgctggagactgcatttgggggcagaaattcaattaccattgatatagacaattatgctgagagaatgaggagatcagatcttgcgagaggagttttaatcatccaaacggacataaatctgattagtcgacatcactgaatctctattctctgtggagaatgcctattgcttaatgacagctaatgaagaacaagaaggtaccgtgcaaaaaagtggaagaaaaagaacaagccatagaaaactacgtgctcaccttagctgttttagatgttatatcaattaatctcaataattatggacgacatgttgcgcatgatcaaaaaaccagttaatccttacagtatgtttatgtaatctaatactacctctgttttatattattaattgttgttgacatttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0267100, RefSeq:Os05g0267100