Os05g0269500

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Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0269500| Description = Conserved hypothetical protein| Version = NM_001061589.1 GI:115462908 GeneID:4338255| Length = 6869 bp| Definition ...")
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Gene Name

Os05g0269500

Description

Conserved hypothetical protein

Version

NM_001061589.1 GI:115462908 GeneID:4338255

Length

6869 bp

Definition

Oryza sativa Japonica Group Os05g0269500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:10858894..10865762

Sequence Coding Region

10859074..10859543,10859651..10859739,10859902..10859999,10860359..10860447,10860532..10860625
,10860982..10861014,10861159..10861276,10861535..10861635,10861711..10861791
,10862461..10862658,10862762..10862896,10863177..10863255,10863644..10863704
,10863786..10863840,10864554..10864593,10865075..10865163,10865260..10865412
,10865525..10865710

Expression

GEO Profiles:Os05g0269500

Genome Context

<gbrowseImage1> name=NC_008398:10858894..10865762 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:10858894..10865762 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcgtcgtcgaggaacccctctccctactatcctcctcctcctcgcgttcgtcggcggcgcatgcggaacggagatcctctccaagtcccgcctcgagagctgctcccacgactcggatgccggcggccgcctcaagtgcgaccggaagctcgtcgtcgacctggccgtccccagcggcgccagcggcggcgaggcgtcgctggtggcgcgggtggccggggtggaggaagagaacgacacgccatcggcgacgaagagcatccgggatccccccgtcatcaccgtcagcaagtccgccacctacgcgctctacgccctcacctacctcgacagggatgttgcttacaggcctgacgagaagtatgtcaaaacacacaaatgtgaaccatatgccggtgctaaagttgttggagagtgtgaaaggttatgggatgagaaaggcaatgtaatcaagcaaacagagcctatttgctgtccatgtgggcctcaccgtgtacaatcgaaatgtggagacatatggtctaaactgaccaaaggaaaagctaatacggctcactgtgtgcgatttccaggcgactggttccatgtattcggaattggagcatggtcacttcggttcagtatcagagtacaagtgaagaaaggatcttctgtatgggatgttgttgttggtccagagaataaaactgttgtttctggagataactttctgagagtaaaagttgttggtgattatactggttatacaagtatcccatcatttgaggacaactatcttgtgactccacggaagggtactggtagtagtcagccacaagaccttggtaatgaacattccaaatggatgatattggacagagttcgttttacactagacgggcttgaatgtgacaagattggtgttggttatgaggcttatcgaaaccaacctaatttctgttcagcaccatatgggagctgcctgggaaaccagctttggaacttctgggagtatgacaaaagacggatcgacaacagccaactgcccctatatattgtggaaggaagatttcagaggattaatcaacatccaaatgcaggtgctcatacattttctgtgggtgtcacagaagatcttaataccaatttactgatagagttgatggctgatgatatagaatacgtctatcagaggagtccagcaaagataattgacattcgcgttccaacatttgaagccttaagccaagttggtatagcaaatgtcactactaaaaatattggtaaactggagtcttcatatagcttgacgtttaaatgctcaagtggtatcagtcctgtggaggagcagctctataccatgaaacctgatgaagtgattgcccgatcatttgagttgcgttcaacaacagatcaagcagcaatgcatcaatgtgaagctattctgaaggcatcagactttagtgaacttgacagagaaggataccgtttctctaccgcagctacggtttataacaatggagcacagatcggtccaacgaatgaccacaagaaaggcggcttctgggattccatcaaagctttgtggcgtaacctgatcgatttccttactggcagattgtgctggaccaaatgcccgagattgttcgacttcggctgccatattcagtacgtatgcatcggctggatcctactgcttctcctgatacccgcagctgtggttttcctgtggcttctgcatcaggaaggcttgttcgacccgctgtacgactggtgggggctggagccggacgacgactaccgcgcgcgccgacggcaccagaaagggcggcaccaccggcaccatcacgaccaccggcaccgtcacggccacagccacggcgaccaccaccaccactaccacggcgggcaccaccagaggcgcaggcaccaccacccaccagcgtgggatgtggaaggccaccaccacgacaggcagcagcacagccacgaagcggggcgcaaccaccaccgtggctacggcgaggtggtggccgcgggcgcggcgccgctgcgtttggacagggcgagccggccgggccagacggaggtcgacgccgtggtggagtacagggagcggaggagccgccacgagaggcacggcgggcacgggcaccgcgacggccactactccccgtctgtgtaa</cdnaseq>

Protein Sequence

<aaseq>MPRRRGTPLPTILLLLAFVGGACGTEILSKSRLESCSHDSDAGG RLKCDRKLVVDLAVPSGASGGEASLVARVAGVEEENDTPSATKSIRDPPVITVSKSAT YALYALTYLDRDVAYRPDEKYVKTHKCEPYAGAKVVGECERLWDEKGNVIKQTEPICC PCGPHRVQSKCGDIWSKLTKGKANTAHCVRFPGDWFHVFGIGAWSLRFSIRVQVKKGS SVWDVVVGPENKTVVSGDNFLRVKVVGDYTGYTSIPSFEDNYLVTPRKGTGSSQPQDL GNEHSKWMILDRVRFTLDGLECDKIGVGYEAYRNQPNFCSAPYGSCLGNQLWNFWEYD KRRIDNSQLPLYIVEGRFQRINQHPNAGAHTFSVGVTEDLNTNLLIELMADDIEYVYQ RSPAKIIDIRVPTFEALSQVGIANVTTKNIGKLESSYSLTFKCSSGISPVEEQLYTMK PDEVIARSFELRSTTDQAAMHQCEAILKASDFSELDREGYRFSTAATVYNNGAQIGPT NDHKKGGFWDSIKALWRNLIDFLTGRLCWTKCPRLFDFGCHIQYVCIGWILLLLLIPA AVVFLWLLHQEGLFDPLYDWWGLEPDDDYRARRRHQKGRHHRHHHDHRHRHGHSHGDH HHHYHGGHHQRRRHHHPPAWDVEGHHHDRQQHSHEAGRNHHRGYGEVVAAGAAPLRLD RASRPGQTEVDAVVEYRERRSRHERHGGHGHRDGHYSPSV</aaseq>

Gene Sequence

<dnaseqindica>6220..6689#6024..6112#5764..5861#5316..5404#5138..5231#4749..4781#4487..4604#4128..4228#3972..4052#3105..3302#2867..3001#2508..2586#2059..2119#1923..1977#1170..1209#600..688#351..503#53..238#ggcttctctcaactactgtttgcttcgccgccgtcgctggcggcaaaccgccatgcctcgtcgtcgaggaacccctctccctactatcctcctcctcctcgcgttcgtcggcggcgcatgcggaacggagatcctctccaagtcccgcctcgagagctgctcccacgactcggatgccggcggccgcctcaagtgcgaccggaagctcgtcgtcgacctggccgtccccagcggcgccgtaagcaagcagcgccctctactccgtcccgtctttctgcatttcagattccaccacaatcagatcagattgtgcgttctgatcagattcttcttcttcttctttctcgcagagcggcggcgaggcgtcgctggtggcgcgggtggccggggtggaggaagagaacgacacgccatcggcgacgaagagcatccgggatccccccgtcatcaccgtcagcaagtccgccacctacgcgctctacgccctcacctacctcgacagggtatttacttagtgactgtttcatcaaatcaagtgtgtacttcttaatgctctgttactcaatccctttaatttctcctttgctttctctcttcaggatgttgcttacaggcctgacgagaagtatgtcaaaacacacaaatgtgaaccatatgccggtgctaaagttgttggagagtgtgaaaggtaacacatttccatgcttcttgttgatgcatcatcattaattaacggcctgtcaaaatcaatttttacataattacatgaccgtctcatcattattataagcggatttttttatagtccgccagtacaaagtaaacctaaagtgtctaggcaaatcgttctttagtgctccctccgtcccagaatatagcaacctaggaccggatgtgacgtatcctagtacatgtccagattcgtagtactaggatacgtcccatccggtcctaggttgctatattctgggacagagggagtagtgtttgtagagtaatttcaaatgtgtttgatggcctctttatttgaaaaaaaaagacgtgactaaccttttcgtagatccttgttctttgggttcacaactataaacattcttatttggcattctctatgatgtttatgttataccaacgtaatggtgccttttaatttccatgactacggttaggttatgggatgagaaaggcaatgtaatcaagcaaacagaggtgagtaacatcatacttatatgcttattgttacctggtatattgatatacaataatattaattttcttattctgcatggttgagtctaaccttctttactgaaaaatcgtctcccaatttagcgtccatggaatgccatgttcccatgctaaccatcggatcttaaatagatgttttagttagccacattttggttgaaatggtagaatttagttgaaatataagtaacccctctgtttcatattttaaatcgcttttgaccttaattttagtttatagaaaaaattatcaacatctgaaacaccaaattagtttcattaaatctaaaaataaatatattttgataatatgtttgttttgtgttaaaaatgttactgtgttttcctataaacttgatcaaatttaaaaatagtttgactagaaaaaaaaatcgaaacgatttataatatgaaacggagagagtatattttcttgaaaaggtaactcacaagacatgtttcatgcctccttcagaaatttttagtctataattgtttgttggcagtaggaatcatttaagtgacctcgcaggaaagtgaaggcaatatgctagtattaatggcacatatatttcagggaaggcctttgtttgtgcttttacttctatacacatggatataatttataatcttgttatgacgctcactttttcctctacgttggcttgtactagcctatttgctgtccatgtgggcctcaccgtgtacaatcgaaatgtggagacatatgtaagtccataaattatgttattcttctggatgtttttctgcacactacctaacacaccatcacactcatctactttatagggtctaaactgaccaaaggaaaagctaatacggctcactgtgtgcgatttccaggcgactggtatggaattacttgtgatgtactttttttgtatattgcttttgtaatcaataatcattaacttagtgattccttgactcggtgtactgacttaactgaaaataaaggttaatgtcttggctatacttcttgatcggaatgttaattgtctaaacttgactagtggcatgatttataatgtgttttgttgatcaggcatgattttatttgtttttggccagctgggcatccatcacagaagtattttttttcatattccaaaacctagtttacttcttctgaagtaggggacactttccaaggcactcttctataattccagggtatcctttattatttgtttatgatcaaattgagtaaatgcatccctttgttttcttatgagcaggttccatgtattcggaattggagcatggtcacttcggttcagtatcagagtacaagtgaagaaaggatcttctgtatgggtatgatttgaaatacttcattaagagttccatcaagctattatcactgaggactcctgaataaattatcagatgaaccgtcttggcaattcttcaaagccttaagcataaatagccatgatatgaacggatgaagtttagcagccttgttgaattttgtgttgttaaattcgagattatcttgctttttttaggaactaaaattttgaatgtttatgtttttgggtatgccaagcctcagaagtgtttttacaatttttcttttccaattttactgcaggatgttgttgttggtccagagaataaaactgttgtttctggagataactttctgagagtaaaagttgttggtgattatactggttatacaagtatcccatcatttgaggacaactatcttgtgactccacggaaggtgcatcatcaaattatgatagtcatcctgacactatcaatatatttgtaatttctgttatgtgactttaaaacattattgaaatgtgctatatgtgctgaagggtactggtagtagtcagccacaagaccttggtaatgaacattccaaatggatgatattggacagagttcgttttacactagacgggcttgaatgtgacaagattggtgttggttatgaggcttatcgaaaccaacctaatttctgttcagcaccatatgggagctgcctgggaaaccagctttggaacttctgggaggtaattatagaattaattagttgattccctgtgctttgttacgggatgtgtggatgaatgcatgttatacattatagaaatgatagatgtatatgtttaaataatgtgaaaatgatgtggagataatgatttgacattatctgcatattgagttctaaaaatacaacaaaattataaatgatacatcatgtttgcatgatatttaaaatactctagttaataattggtagtgggtgctgatgtggcatactcgcatgtgatttaaaatactctaaataataattgctagtgggtgatgatgtgacacacttgcatcttgagatttagaagttagtgggagtcaactatatagatagtatagatgtgcctagccctattattttattcttttccttttcaccaagataggaaatcatgttgccaacaaaagagcacaacagagaaatattgcctttcttggctaccactggttatggaaaattaagtgtcacgaatgggccatcttctttttttttcttttcatcctaagtcatattgtaaattttatctcttgctgttactaatttaatactgaagcacttcttttagttttcattctggtgagatcaccacaagataaaaagtgtttggtgcctattgagtcttgaaagatgtcacggtttgtttcagtatgacaaaagacggatcgacaacagccaactgcccctatatattgtggaaggaagatttcagaggattaatcaacatccagtacatttccatcgcctctcttacattgctctcgttgctaatgttggataaagcttctaatgcatgcccctatagaatgcaggtgctcatacattttctgtgggtgtcacagaagatcttaataccaatttactgatagagttgatggctgatgatatagaatacgtctatcagaggtaataatgatgtttaatcattttgatttaacaataaccacttagatttatattggtagattaaatcacacttttcaaagcagatgctatcaataaaatttctctaaaccatacttttctctaaatttctgccatgtttgacaaacagtatggaaacaatcatctctgctctagttttcatctctgaagtcttgctcttgtacatttctctgtcttttaaattagtagagtgtctaatgtgttgcacttccttatcaggagtccagcaaagataattgacattcgcgttccaacatttgaagccttaagccaagttggtatagcaaatgtcactactaaaaatattggtaaactggagtcttcatatagcttgacggtatgtatctcttatagaattttccttgccgtgtgtattttttttctttaatgtagtccgagttcaaagtagtacgaactgacctgcaaattaaggctgactttgattttcttgaaacttaaccagtgtttgctacttttgtagtttaaatgctcaagtggtatcagtcctgtggaggtaatattactagtatcatctagtacatgtttagtgcttcggtatgcattgtttgtttctacttgtcctctttttatgcattccaaattttacttgaagacctgcttcggtagatttaaacctttttcaacattttattggtcaagtaaacgtatagtttcattccatgtaatcagtaaagctgcctggctattttggacagtctattttccttttaagtggaatatttgggacatttgttccaactctatcatgttttatgcctcattttactgtttattatccatcatcaaactttcctgctttatgttctcactggattcagtctcttgaagttttcctggcgtggttttcaggagcagctctataccatgaaacctgatgaagtgattgcccgatcatttgagttgcgttcaacaacagatcaagcagcaatgcatcaatgtgaaggtaatagagcttagcatcagttgtgctgtcaatgatcccgtgttaggactcacatggcaggcatgcctctaagttccatttcagctattctgaaggcatcagactttagtgaacttgacagagaaggataccgtttctctaccgcagctacggtttataacaatggagcacaggttctgaatatttgcgctttcttaatgattctgattgaactgattagtgcagaaaaaactatatcaaatttggattcaataccaaatgtcaatctctatgctctttgggctaaaaagagaactattaaaactttgtcgaatttggatacaatatcaaatgtcagtcgttatgctcctttggctaaatagagaactattagatgcttttataaccaagtcatacattatcatctcgtgtaaaattattatgagtataaataatgaactcagccacgattattatgtattctctgaacaattaaatccattcgtttttgccgcgaagttccgatgcttaacttgccttgaaaactctgtagatcggtccaacgaatgaccacaagaaaggcggcttctgggattccatcaaagctttgtggcgtaacctgatcgatttccttactggcagattgtgctggtacttcaattctttctagtgtgatcataacatggttttatatttgctgagtgttcatcattactagatagtaattgtttgtgctagctctgatcattgttgatacagcataagtatttttgttccgttttctgcttcttaccatatatcatctcggttcaggaccaaatgcccgagattgttcgacttcggctgccatattcagtacgtatgcatcggctggatcctactgcttctcctgatacccgcaggtacgttcgttagcctttcagtaccgttcgtttcatcgccagatcgatcatcaagctgccattgctcatcattttttttttcttacctcaatctgtcatttttgcagctgtggttttcctgtggcttctgcatcaggaaggcttgttcgacccgctgtacgactggtgggggctggagccggacgacgactaccgcgcgcgccgacggcaccagaaagggcggcaccaccggcaccatcacgaccaccggcaccgtcacggccacagccacggcgaccaccaccaccactaccacggcgggcaccaccagaggcgcaggcaccaccacccaccagcgtgggatgtggaaggccaccaccacgacaggcagcagcacagccacgaagcggggcgcaaccaccaccgtggctacggcgaggtggtggccgcgggcgcggcgccgctgcgtttggacagggcgagccggccgggccagacggaggtcgacgccgtggtggagtacagggagcggaggagccgccacgagaggcacggcgggcacgggcaccgcgacggccactactccccgtctgtgtaagggatggctctgacagtctgacgcatctagtgtacgtgggattgacatttgagtattcaccagcgatctcgtggtggacttttcagtcagttcttgacattgacgtttgccttgtactaaagccaacgtggacttttaataccctccgttttttaatagatgacgcagttgacttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0269500, RefSeq:Os05g0269500