Os05g0270000

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Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0270000| Description = Ribosomal protein L25 family protein| Version = NM_001061591.1 GI:115462912 GeneID:4338257| Length = 3867 bp| Defin...")
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Gene Name

Os05g0270000

Description

Ribosomal protein L25 family protein

Version

NM_001061591.1 GI:115462912 GeneID:4338257

Length

3867 bp

Definition

Oryza sativa Japonica Group Os05g0270000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:10876427..10880293

Sequence Coding Region

10876486..10876932,10877863..10877992,10879910..10880130

Expression

GEO Profiles:Os05g0270000

Genome Context

<gbrowseImage1> name=NC_008398:10876427..10880293 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:10876427..10880293 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatgctactccggcgacccctccgggccctcaccctcccgctcctccgcccccacctctccaccgccgccgcggcggaggtgtcccccgcggatcaccacccggacctcctgtcgccgccgttcggctacctcccgggccacccgcggccggacgcgaagcacgacgagctgatcctcgccgtgccgcgggcctccccgggacgccacgtggcggccaaggagcggaaggccgggcgggtgccggccatcgtgttcgagcaggagaacggccaggaggggggcaacaagcgcctcgtctccgtccagtcgaagcagatccgcaagctcgtcgaccacctcggccggtccttcttcctctcccgcctcttccgcctccaggtctggtccgagcacgccgggcagggggtgctcatcgagagcgtccgcgtcctgccgcgtaaggtacacttacatgcaggcactgatgagcctctgaatgtgacattcatgagagccccttcgtcggcactgctcaaaattgatgttcctttgatgttcattggggacgatgcgtcacctggtcttaggaaaggagcctacttcaataccataaaacgaactgtgaagtatctctgccctgctgacatagtgccaccctacattgaggtggatttaagcgagttggacgtgggccaaaaactgttgatgcgtgatctaaaagtccatccagctctgaagttacttcagtcaccagaacaacccatctgtagtattatagggtcaagagcacctgaacagaagaagtcaaaataa</cdnaseq>

Protein Sequence

<aaseq>MAMLLRRPLRALTLPLLRPHLSTAAAAEVSPADHHPDLLSPPFG YLPGHPRPDAKHDELILAVPRASPGRHVAAKERKAGRVPAIVFEQENGQEGGNKRLVS VQSKQIRKLVDHLGRSFFLSRLFRLQVWSEHAGQGVLIESVRVLPRKVHLHAGTDEPL NVTFMRAPSSALLKIDVPLMFIGDDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEV DLSELDVGQKLLMRDLKVHPALKLLQSPEQPICSIIGSRAPEQKKSK</aaseq>

Gene Sequence

<dnaseqindica>60..506#1437..1566#3484..3704#aaaaaaaaaaaaaaaaaccttacaaccgcgacggccgccgacgcaggcagacggccgccatggccatgctactccggcgacccctccgggccctcaccctcccgctcctccgcccccacctctccaccgccgccgcggcggaggtgtcccccgcggatcaccacccggacctcctgtcgccgccgttcggctacctcccgggccacccgcggccggacgcgaagcacgacgagctgatcctcgccgtgccgcgggcctccccgggacgccacgtggcggccaaggagcggaaggccgggcgggtgccggccatcgtgttcgagcaggagaacggccaggaggggggcaacaagcgcctcgtctccgtccagtcgaagcagatccgcaagctcgtcgaccacctcggccggtccttcttcctctcccgcctcttccgcctccaggtctggtccgagcacgccgggcagggggtgctcatcgagagcgtccgcgtcctgccgcgtaaggtgggttcactgttatgttggcgctggcaaatgattccttttttttttctgataggaatagagatttcacgacaatgtagtttgtaaaatttgctttcttgagtaatggttatactgtgcatcatgatgaagccgtaaatctttcaggtttacatagtttagatgtttgtgatttgagtcaataagtttatttaggatcatcgttgctccatttctaggtgaatatgttgagttttgtttatgaagcaagttgttgccggatataagattgggttggtgacaatataacggtgtattcatttgagaaattgacattactctgtagtataataagctactcctacttggtttgtaattgtttactctgttcaacaatattttacctctgcatttcctcgaaagttggtcaatatccacttgtatcctttggcctggttcaatttatatagcccaacctagtatgcagaaagtgtataatgtttaggcttaaatatttacacaatatcaatcatgttttattggcatgtctttttccttaaaaaaaatatggcataactctcgcaagtaaatgctgccaattgggatgtatatagagatagaagtatattctagtgttaaggaggtatttagataaaacataagaggatacacctctacctgtcgataacttccaaggaccaaaagaaaaaaaaactcaattttcatgataaaacattgtaaggagtgctggacccccaaataatatctatccagcttgtctaatgccaacaagagtgcccttgtacctatggttctaaattctaataatatctcaatgcagaagcagtttttttttcatgaatagtgcagttcaggacatgtagaaatctatattctctctctctctctctctctcatttttgggtgattagtctgtatctatgttttcaggtacacttacatgcaggcactgatgagcctctgaatgtgacattcatgagagccccttcgtcggcactgctcaaaattgatgttcctttgatgttcattggggacgatgcgtcacctggtcttaggaaaggtatgtagcatgcttggtgattatgcatctatcttgtttaaaatttaaatcaagtgttaaccagaaaattcctcagttctcttgagcggcacctaccgattcagtgttcttcaatggtttgttatgtgttccatgtatgttcatttctctcacagatcactaattcactgtaatactgaactttgcattcccatagtggcatgtacagtgttcaatcattacctgcattagatgacaccccaaatattgctatggaaaaattgcacagagcaaaaggagcgatttgagcaaaatgcggacttcacaaaacaaatactcgagacttaatcaacatgaacaacttaaacgtaattcaacatgataaacaacttaaaaattgtgccatcgtctagaaatggtaattaagaaaaagaagctgcctgtgatttttaggatctgatgctcagttattatgcaagtataggaaacaactaattaggaggttcatacagcagagttttttcggtctctaggatgcttatgtattaaagtagaataggctagttcggtattatgtgtataacgaaatcgattcatgaactgaaaaaacagctaaaactttttttaaaaaagtggaggaatattacatttatagctatgcacaatgtgcacacgactggtgagcttgttcctgatgccctgaagcaacagttgtggtacctgaaaacgcaagagaaaaatgcatacctctattttctattccctctgtattaagcattgaagcatactaaaaatcatccattcactgtgctaaatctaaggtagtaaagttaccaccgatttgagtggtataccgttgtgaatttgtcttcaatctctgtaaaagcaagcatcctagaaccatagctgctaccaatttagcaatctgccatgcagtaaatgaaataagaaaaagcctagaacaaaatatatgcgattgactctttagtaggttaagaaaagagagaatctttggatcggagaccatgtatatatggggtatctctatctgctacttccctctatttcacattataagatgttttgggttttgaatagattcatgcatggatccatgtatgtgctttatacatgtgtccaaattcatatggatgttagtgaatctagaagagcgatggagaggctaaaacgtcttacaatgtggaactgaggtagtgccttggtaccttgctctgctgcatggttcttagcaaaaggaaagaacattggactaaaagccatgcacaggcaatctagattgagcaatgaacaatgggagtgggggttacaaattttaattggtgtttactcatattcattgtagttaaggcaagaccgttacaaatccaggcagggaaggtgtggaggcaggtgttggagaagggtgaatagcacctaggagaatggcgccaaccaagggatatcgcgagggaggtgtggaaatgaagcaaacgggaaaggagcattgatctgagtcgtctgtgggcgttgtccaccacgtgccattgctagtatagttgatgtctacctgtgctggtagcatgtgagtagccatgtaggggagtagcgataggctgacaaggggagaggaaatgtgattttgggcctgataccggattggcaagttgatcaaatggctgatttgtggatagccatgttcatctaacggttcagacaatcttgataatgtggcaaaatgtgggtgcttctttgttagccgtaaatacggttagtgcgcgacaattatatagtagtaatataggattgccaattttttcttaagctaggatcctgcattttactcaagctgtttgttatgtgttcgcctgctgtttgatgataatacttcgtttcaatagttttccgggctaatgtgattaaatatctctggaattgcaggagcctacttcaataccataaaacgaactgtgaagtatctctgccctgctgacatagtgccaccctacattgaggtggatttaagcgagttggacgtgggccaaaaactgttgatgcgtgatctaaaagtccatccagctctgaagttacttcagtcaccagaacaacccatctgtagtattatagggtcaagagcacctgaacagaagaagtcaaaataactttgttcgatgtattaactgttttcacataataagatcctcgttttacattcatgcttgggttatttgagtctttattgtcctccaagagtgaatactaggatgatttgtagcctagagaccactattttgcctgaggaatgaattggaagccagatgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0270000, RefSeq:Os05g0270000