Os05g0271300

From RiceWiki
Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0271300| Description = Ribonuclease III domain containing protein| Version = NM_001061596.1 GI:115462922 GeneID:4338262| Length = 2343 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0271300

Description

Ribonuclease III domain containing protein

Version

NM_001061596.1 GI:115462922 GeneID:4338262

Length

2343 bp

Definition

Oryza sativa Japonica Group Os05g0271300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:10956707..10959049

Sequence Coding Region

10956707..10957099,10958145..10958312,10958369..10958467,10958675..10959049

Expression

GEO Profiles:Os05g0271300

Genome Context

<gbrowseImage1> name=NC_008398:10956707..10959049 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:10956707..10959049 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcctgcctcccggaagcgcgggccgccggcgccggacccggtggagcttcccccgccgggcttcgtggcggaccgcgcggaggcggcggcccgcgtcgagcggctgctgcgctaccagttccgcgacgggcgcctgctggaggaggcgctcacgcaccagtccttcgccgacgacgccgtctcctaccagcggctcgagttcgtcggggactcggcgctcggcctcgccttctccaacttcctctacctcaccaaccccaccctcggccccggcccgctctccacgctccgcgccgccaacatctccaccgagaagctcgcgcgcgtcgccgtgcgccacgacctctacccgcttctccgccgcaactgcccccgcctcgatctcctcgtaggtcagtttattgaaacagtgaagcaagagccagaggatgatcttagtactgtaccttatggtggtagtgttgtcaaggctcccaaggtgctcgctgatattgttgaggccattgctgctgctgtctatgttgattgcaaatttgatcttgagaagctctggaagagactcacatggttacatggcctccaagaaataaggtggactgttaatacaaataacataaaagattggataaacaattttatttatgggaagcgtctggtcacaaggtggctgtttgagccaattattacagcagaaacaatagacgagcaacctgtgactatgttgcatgaactatgccagaaacacgggaagatggcacaattcaagacatggcaaaaaggtgggatgacagtggtcaatgtatttgttgctggggagctagttggtattggttcctcggagcagaaggtaattgctaagcttaatgctgcacgggatgcaacaaggaagcttgcaggtgcaaagaagcaagtgttaacaactggggttggcaacggattgggggatgagattggagagcttagggagtgcaaacagaagcttaatgagcaatgcagcaggcagaattggccaaaacctatctttaagtaa</cdnaseq>

Protein Sequence

<aaseq>MKPASRKRGPPAPDPVELPPPGFVADRAEAAARVERLLRYQFRD GRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPGPLSTLRAAN ISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPYGGSVVKAP KVLADIVEAIAAAVYVDCKFDLEKLWKRLTWLHGLQEIRWTVNTNNIKDWINNFIYGK RLVTRWLFEPIITAETIDEQPVTMLHELCQKHGKMAQFKTWQKGGMTVVNVFVAGELV GIGSSEQKVIAKLNAARDATRKLAGAKKQVLTTGVGNGLGDEIGELRECKQKLNEQCS RQNWPKPIFK</aaseq>

Gene Sequence

<dnaseqindica>1..393#1439..1606#1663..1761#1969..2343#atgaagcctgcctcccggaagcgcgggccgccggcgccggacccggtggagcttcccccgccgggcttcgtggcggaccgcgcggaggcggcggcccgcgtcgagcggctgctgcgctaccagttccgcgacgggcgcctgctggaggaggcgctcacgcaccagtccttcgccgacgacgccgtctcctaccagcggctcgagttcgtcggggactcggcgctcggcctcgccttctccaacttcctctacctcaccaaccccaccctcggccccggcccgctctccacgctccgcgccgccaacatctccaccgagaagctcgcgcgcgtcgccgtgcgccacgacctctacccgcttctccgccgcaactgcccccgcctcgatctcctcgtacgtgccgagacaatccatctcttctcttattggagaatcatgcaatttcgatttttgatttgatgctcgctcaatcggttggccttgggatagtaaagtactagttaaactctgttgacatacttttgtagattctatgttttccaatctgtatactgccatggtaagtaagattgtggtcacacaaatgctatggttgtgcctttcactttgcttagaccattgcgtcataagtgagttcacggtttatatcaaggaagggataaactggtgtgctcaatcgcccattggaaaatttttaattcctgtctcccggcttgacactcggaattgattttaaacgtcaagaccagttttcatgtactatatgtttctcttaaactttagaccacatggacgccattctctttcttatggttttagaaatttccttcctttgtactgtttatatgcaatttggtggtgtttagcatttatagaaagaaaaagaagcaagtaatggcattaatatatcttttgaatgtactaagtgctattcttccaaacctgtgaaaaccatagaagattttttgtgtccattccaatgcttagtatactgctataactggatgttttatctccttgagcaataaaaagagaaggggacaccgtaggtgtagtggtagttcaaagttcaacctctcaactttgaaattaagcccatgtctttattcttgactatgtagttaaaaggaagcaatgttgattctggacaacagttggtttctacctgaaatgaaaaaaaaatgctgactcaaattccattgtctttgacctcttattcataacgggaatttgatatgcaaattttaatcttttcgaatgaattgcatcattttgtatcaattgtttgttgacactatagaaatgcttttgaataggtgctctgaactgttagtgtttttctgctattacatctacattatatttttatgaggtagatattggacttaatgttttaattatcattcttctgtaattggctatactactaataatgcaggtaggtcagtttattgaaacagtgaagcaagagccagaggatgatcttagtactgtaccttatggtggtagtgttgtcaaggctcccaaggtgctcgctgatattgttgaggccattgctgctgctgtctatgttgattgcaaatttgatcttgagaagctctggaaggttcttagcttttactttatggtgtactactgctaacaattctttacattcttcagagactcacatggttacatggcctccaagaaataaggtggactgttaatacaaataacataaaagattggataaacaattttatttatgggaagcgtctggtattttttttatcatatgactaatatcatattgatgtacctacaattgtgcagttaggaaattttgatggtcccttgaggaaaaggagaaatttaactgcatgatatctaagccaacatttatgatcacatacacatacacggagatagatagagtagatggatttactggtggtgatagtaatagctgtgttgtatatgatttaggtcacaaggtggctgtttgagccaattattacagcagaaacaatagacgagcaacctgtgactatgttgcatgaactatgccagaaacacgggaagatggcacaattcaagacatggcaaaaaggtgggatgacagtggtcaatgtatttgttgctggggagctagttggtattggttcctcggagcagaaggtaattgctaagcttaatgctgcacgggatgcaacaaggaagcttgcaggtgcaaagaagcaagtgttaacaactggggttggcaacggattgggggatgagattggagagcttagggagtgcaaacagaagcttaatgagcaatgcagcaggcagaattggccaaaacctatctttaagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0271300, RefSeq:Os05g0271300