Os05g0273500

From RiceWiki
Revision as of 10:13, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0273500| Description = Conserved hypothetical protein| Version = NM_001061603.1 GI:115462936 GeneID:4338269| Length = 2725 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0273500

Description

Conserved hypothetical protein

Version

NM_001061603.1 GI:115462936 GeneID:4338269

Length

2725 bp

Definition

Oryza sativa Japonica Group Os05g0273500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:11098720..11101444

Sequence Coding Region

11098864..11100384,11100491..11100589

Expression

GEO Profiles:Os05g0273500

Genome Context

<gbrowseImage1> name=NC_008398:11098720..11101444 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:11098720..11101444 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatggctctggctctgagctgtggcaggaggcagagagggaagaaaggcggcggcggcggcggcgactgcggcggccgccatttccatgtccactaccatcttcctcgccgggtctgcgcctcctcgtttgttcccaatttgctgcctcgttttttctcgctgctgtcagcttgcgtgctggttcctcctgtgctgttcttggctgtgcttgccttcctcgtcttgtttctctggttcaccttgctgtattttattcgctccctgtggaacaaagacatcaacggtgagaccttcgagaggagtagcaacgatcatggcagcgatgctgataaacgccttggagaaggcgttgcagaagaaggaaaggcagagaagaaaactctgaagatttcgtctgaagattgtgctagaaggtttgagatagaagaggtactacatgttaattctgatgattctcaaaacttgcctagtatggtgtcatctgatggttgcctgaactgtaagatgcatactgatgatgaaaaactcatcaaagaggtgactgtctttgagataaaaagaagggaatcgggagctgctattgtctgttctgatggtttgtcacaaaagcgtcagccacgagatatgtcagttgattggtttgaggaagaaactaaaagtggagatatcatcaaatcaggtgattcatctccaactgtactgtcaactttttcatctgaatttcatgatttctctgacaacaatgaagtggtagggttggccacggattttcttgatgtaaacaatcaaaataaagcagtattgctagatagttcatctcatcgtggtatcatggacaatcattgcaaatgtggtgaggaattttcttctgataaggaggctccagcttaccatttatttgaaaattatgattttgttgacaagcatgaaacaaaagaggtggtacttggtgatacagtagtcttgacctttgtagatgatttagccaatgatgactctgaatatagggaggatatttcagaacaaaaggatccaaataatttatcaggattgcttgataacgttgcagatattttttaccagcagcaagaaatacataaggtggttgtttctgacgacaacaagccacctgaagttttgttcctcagtggaaagcaaactgtcagcagttcaggtgaatttagttctcctaatgagaatggaacatcaggatttccttttgattctgtttgtgaagataaaaatggaacagtggcctatcccagcgtagcatcccattataatatcggtattgaagatgacaaatgtgaggatcatactgacaacaacatagaggaggcatcaagtatcgcatctacaaattgtggttctgctgataagcatcagactatacaggtgttgcctgtttgtttagcaaatggagataacattgatgatgttgcttcattggggagttcaatttgtgaagacgttgaagataaagacaacaaaagtaatgctaattgtatttcagagggagctccacatggaaacggaatgccacttgttaggtccccagcatcatggtggaatttatgtggagttattgatgtgtttgctggatgtaaagattga</cdnaseq>

Protein Sequence

<aaseq>MAMALALSCGRRQRGKKGGGGGGDCGGRHFHVHYHLPRRVCASS FVPNLLPRFFSLLSACVLVPPVLFLAVLAFLVLFLWFTLLYFIRSLWNKDINGETFER SSNDHGSDADKRLGEGVAEEGKAEKKTLKISSEDCARRFEIEEVLHVNSDDSQNLPSM VSSDGCLNCKMHTDDEKLIKEVTVFEIKRRESGAAIVCSDGLSQKRQPRDMSVDWFEE ETKSGDIIKSGDSSPTVLSTFSSEFHDFSDNNEVVGLATDFLDVNNQNKAVLLDSSSH RGIMDNHCKCGEEFSSDKEAPAYHLFENYDFVDKHETKEVVLGDTVVLTFVDDLANDD SEYREDISEQKDPNNLSGLLDNVADIFYQQQEIHKVVVSDDNKPPEVLFLSGKQTVSS SGEFSSPNENGTSGFPFDSVCEDKNGTVAYPSVASHYNIGIEDDKCEDHTDNNIEEAS SIASTNCGSADKHQTIQVLPVCLANGDNIDDVASLGSSICEDVEDKDNKSNANCISEG APHGNGMPLVRSPASWWNLCGVIDVFAGCKD</aaseq>

Gene Sequence

<dnaseqindica>145..1665#1772..1870#cctttcaccaagttcgaattatttttcgcctttggagacggcacaaaaggcaagaaaacggaggaggaaaactaggccacgcattgacaggatcttctcccttgtgttcttgctgcttttctgctccatgtcctgctcttggagatggccatggctctggctctgagctgtggcaggaggcagagagggaagaaaggcggcggcggcggcggcgactgcggcggccgccatttccatgtccactaccatcttcctcgccgggtctgcgcctcctcgtttgttcccaatttgctgcctcgttttttctcgctgctgtcagcttgcgtgctggttcctcctgtgctgttcttggctgtgcttgccttcctcgtcttgtttctctggttcaccttgctgtattttattcgctccctgtggaacaaagacatcaacggtgagaccttcgagaggagtagcaacgatcatggcagcgatgctgataaacgccttggagaaggcgttgcagaagaaggaaaggcagagaagaaaactctgaagatttcgtctgaagattgtgctagaaggtttgagatagaagaggtactacatgttaattctgatgattctcaaaacttgcctagtatggtgtcatctgatggttgcctgaactgtaagatgcatactgatgatgaaaaactcatcaaagaggtgactgtctttgagataaaaagaagggaatcgggagctgctattgtctgttctgatggtttgtcacaaaagcgtcagccacgagatatgtcagttgattggtttgaggaagaaactaaaagtggagatatcatcaaatcaggtgattcatctccaactgtactgtcaactttttcatctgaatttcatgatttctctgacaacaatgaagtggtagggttggccacggattttcttgatgtaaacaatcaaaataaagcagtattgctagatagttcatctcatcgtggtatcatggacaatcattgcaaatgtggtgaggaattttcttctgataaggaggctccagcttaccatttatttgaaaattatgattttgttgacaagcatgaaacaaaagaggtggtacttggtgatacagtagtcttgacctttgtagatgatttagccaatgatgactctgaatatagggaggatatttcagaacaaaaggatccaaataatttatcaggattgcttgataacgttgcagatattttttaccagcagcaagaaatacataaggtggttgtttctgacgacaacaagccacctgaagttttgttcctcagtggaaagcaaactgtcagcagttcaggtgaatttagttctcctaatgagaatggaacatcaggatttccttttgattctgtttgtgaagataaaaatggaacagtggcctatcccagcgtagcatcccattataatatcggtattgaagatgacaaatgtgaggatcatactgacaacaacatagaggaggcatcaagtatcgcatctacaaattgtggttctgctgataagcatcagactatacaggtgttgcctgtttgtttagcaaatggagataacattgatgatgttgcttcattggggagttcaatttgtgaagacgttgaagataaagacaacaaaagtaatgctaattgtatttcagaggtgagtacaaaaggaagtttcgcttaatttctgaaaattgtggctgttagcttgttatatatttctgaattttactgctattgtatgtttcaaatgaatttgaaagggagctccacatggaaacggaatgccacttgttaggtccccagcatcatggtggaatttatgtggagttattgatgtgtttgctggatgtaaagattgaattgaggtgagaagatagttcattccaattttcacaccgtgacatcgtttgaattttgaactgagggtactccttttaaaacaaaacaaaaggaatccagctgcatggccaattattttgttgatcatcatctgctgcaccgtgggttcgcacaattgttacttatttattttcttgtcaatattgtctaacacaagagagatttttcttcggtggtttttactaagtatgatactacagtaaaaaaactaaattgttgatttattggggtataatggtattttttttcctctctatatgatttgggttttttatttccctttttttccccaagagactggcgttactcgtgtggaccaccagcctatctcacttaaaacgaaatataccaattttactggaattttgccatcctgcaagtatcatttccttttctcacccaaccccgacatagttcttagatgattgcttgattacaaagaatgatctgtaattttattatcgtcaactctcttcgcagtatttggacatgacacattttctgttgtatgcagatgttggcaggtcatgggtggaactttgggacaacagaaaactttagatgctcatcctaatcctgtgttgacaatgaagaagtatttgacagtttggattgaggtattgaattgtttatagtgaggctgtttgttttgttggatgtatatatttttttgttagattgcctgattagtttttgacatgttgtggttcattggctttttctttaaaagctgagtgctattctttctcaagaaagaaagcttcaacttactgtaattgattttgaaagggaaatggaactggaaatgcttgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0273500, RefSeq:Os05g0273500