Os05g0302600

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Revision as of 10:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0302600| Description = TRAM, LAG1 and CLN8 homology domain containing protein| Version = NM_001061673.1 GI:115463076 GeneID:4338352| Length...")
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Gene Name

Os05g0302600

Description

TRAM, LAG1 and CLN8 homology domain containing protein

Version

NM_001061673.1 GI:115463076 GeneID:4338352

Length

1362 bp

Definition

Oryza sativa Japonica Group Os05g0302600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:13584212..13585573

Sequence Coding Region

13584427..13585197

Expression

GEO Profiles:Os05g0302600

Genome Context

<gbrowseImage1> name=NC_008398:13584212..13585573 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:13584212..13585573 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggtggtgggggtgctggattctttggccgccgaggagcggtggctgtacccggggttcctggccatgtacgccgccatctactgcgtcggccaactcgccctgctccggcggtgggcgtggccgctccgcctcgacggcgccagctgcctcatctccctcgcgcacggcacgcccgccgcgctcgccgcggcgggcgccatcctcgcgctgccgccggaggcgagggggttcgccgcgcccaacacccgcctccaggaccacgtcctcgactacagcgtcgcctacttcaccatggacctgctccactacctcgccttcctccccggggacaccctcttcatcgcccaccacgtcgccacgctcttcgtgttcgtcacctgccgctacctcgtccgccacggcgcctacgcgctcctcgtcctcctcgtcctcgccgaggtcaccagcctcctccagaacgtctggacgctcgccgggatctggcgcgccgagaagcccgccgcggcgagggtgtacagggcgctgtcgccgcccttctacttcatctacaccgtcgtcaggggcgtcgccggcccgctcttcttcctcaagatgagcctcttctacctgtccggccaggccgtcgacgtcatcccgtggtgggtgcgcatttcttggatcgtcgtcgtcggcaccgccatcacggtcagcaacctgtggatttggaacctctggaaggagctcttcagagaacggaagcagagcatgacgaagaaaagcacgtag</cdnaseq>

Protein Sequence

<aaseq>MAVVGVLDSLAAEERWLYPGFLAMYAAIYCVGQLALLRRWAWPL RLDGASCLISLAHGTPAALAAAGAILALPPEARGFAAPNTRLQDHVLDYSVAYFTMDL LHYLAFLPGDTLFIAHHVATLFVFVTCRYLVRHGAYALLVLLVLAEVTSLLQNVWTLA GIWRAEKPAAARVYRALSPPFYFIYTVVRGVAGPLFFLKMSLFYLSGQAVDVIPWWVR ISWIVVVGTAITVSNLWIWNLWKELFRERKQSMTKKST</aaseq>

Gene Sequence

<dnaseqindica>216..986#acgcggccgtccatcccttcacactgctccacagccatccatccctccgccgccgccgccgccgccgccgccgccgccgccgaaaccctaccggcgtcgatcgaatcccctcgcctccgcctcgcgcgcacgcggggggttgggcccgaatcggaggcagaccggccaggagcggcgggatccctcgctccgtcggcgcgaatcttggtccggccatggcggtggtgggggtgctggattctttggccgccgaggagcggtggctgtacccggggttcctggccatgtacgccgccatctactgcgtcggccaactcgccctgctccggcggtgggcgtggccgctccgcctcgacggcgccagctgcctcatctccctcgcgcacggcacgcccgccgcgctcgccgcggcgggcgccatcctcgcgctgccgccggaggcgagggggttcgccgcgcccaacacccgcctccaggaccacgtcctcgactacagcgtcgcctacttcaccatggacctgctccactacctcgccttcctccccggggacaccctcttcatcgcccaccacgtcgccacgctcttcgtgttcgtcacctgccgctacctcgtccgccacggcgcctacgcgctcctcgtcctcctcgtcctcgccgaggtcaccagcctcctccagaacgtctggacgctcgccgggatctggcgcgccgagaagcccgccgcggcgagggtgtacagggcgctgtcgccgcccttctacttcatctacaccgtcgtcaggggcgtcgccggcccgctcttcttcctcaagatgagcctcttctacctgtccggccaggccgtcgacgtcatcccgtggtgggtgcgcatttcttggatcgtcgtcgtcggcaccgccatcacggtcagcaacctgtggatttggaacctctggaaggagctcttcagagaacggaagcagagcatgacgaagaaaagcacgtaggtgtatcaagcaaccatgctgtagcataatctatcgaaattgcactgatgatcagatgattcagatgacgatgatggatattttggatggcatttgtggagaattctctatatgacataattctttcattcaggtcagaaatctcaagtctaattaattagtacttagtagggaatagtccaatgggcattctgtcgcatgcattgggattttacttgttgatcattcagctaagaacactaatcactccttgatggcgagttctttggagtgatggttccctttagcatttagataaaaaaaaaatactgtactgctacatatacctcacttgatgattaccaatagatggttctttggagtgatggttcccttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0302600, RefSeq:Os05g0302600