Os05g0324000

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Revision as of 10:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0324000| Description = Conserved hypothetical protein| Version = NM_001061731.1 GI:115463192 GeneID:4338418| Length = 2152 bp| Definition ...")
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Gene Name

Os05g0324000

Description

Conserved hypothetical protein

Version

NM_001061731.1 GI:115463192 GeneID:4338418

Length

2152 bp

Definition

Oryza sativa Japonica Group Os05g0324000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:15030209..15032360

Sequence Coding Region

15030405..15032150

Expression

GEO Profiles:Os05g0324000

Genome Context

<gbrowseImage1> name=NC_008398:15030209..15032360 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:15030209..15032360 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtcgggatggcgcctcctcctcccacggccgccgcgctgccgtcccgccgccgcctcagggagcggatccagtcggagcgccaggtggtcggcggcctcctcaagaaggcggaggccttggtggcccgcgccaaggaggacgtccatggcgggcgcgccgcggcggcgcactccgaggcctgcgctctccctcgccgcggccgtttcttgcgtcgtccggaggcccgaccggaggcggaggccaccgccgcgatggacggggctgcctctccccgcaagaagaggcggaaggcggcgacctccgcgagctcgatcgtggaggtggaggtgatcgagccgaccatgcccaaggcgcagagggaccgcctctacggcctcctctcctcgctgtcggcggagatgccattgccgccgcacatcgtggccttgatgcagagccagtgctgctgcgtcgtggaccctaatggcgaagagatggatgtggaccttggctccgcgaaggatgctgccttgttccagttgctgaacctgctcgaggaattcgctcaacagcagaccaccaagattcagccacggctggcggaggagcaagaaccgcccaagatcgaggcacccgacgccaccagccgctcgtcgtcgatctgccaactgatggaggacggcgaggtcgccgatgagggcgcggacatggacatggacatctgcggcggcgtctctcccctggtagtggacaaggttcagttctcgccgcttccgaagcaagaagaggatgatgagttgatcaacaccagcggcggcggcggcttctctctccaatcgccgcctgccaagcaacaagaggaagaattcgtccgcgatgcctcccctgttgcagttgacaagttccctcaaactgaatctcctagctcgagcactggctcctcttctggatcgtcatcatcttcatcttcgagcggtggctcatctggatcatcctgcagcggttgctcctcttcaggcagcgactctaacgatgacggagacagtgcgagcagccgccctgataactctgaacttcccactgaagctgcagcgaagccattggagcagcagcaggtcacagtctgcggcggcgtctctcccctgatcgatgagttctcgccgcttccgaagcaacaagaggatgacgagttgatcgacgtcactggcggcgtctcccctgtatcagtcaacaagttcccagattctcctcgctcgagcagcagtggctcttcctcctcttccagcagcggttcgtcctcctcctcgtcggaaagtgactcagacgacgacggcgacagtgcgagcagcaagccagacaccgcagatcatcccactgaagctgaggcgccgaagcttcagccattggagcaacatgaggtcgcggagcaagacaagaagctgatcgccgagagagcagcatctccgaacaccgagatgcaggagctgatcgccagggcccaggagaggcagaaactccggcttgagctcgagaggaagacggcgcgcgagctcgagaggaagatggcgcgcgagcagctgcaggagatggagaggacggcacggccggtctacgacagcatcgaccccagtgtcatgaagcagctcgggatctccggcgatgcgcagtacatcgtcagcccggtgaaatctcggcacagcctgcatcggcgcggcggcggcggcctgctacagaagctcggcttcttcctcaaagaatag</cdnaseq>

Protein Sequence

<aaseq>MAVGMAPPPPTAAALPSRRRLRERIQSERQVVGGLLKKAEALVA RAKEDVHGGRAAAAHSEACALPRRGRFLRRPEARPEAEATAAMDGAASPRKKRRKAAT SASSIVEVEVIEPTMPKAQRDRLYGLLSSLSAEMPLPPHIVALMQSQCCCVVDPNGEE MDVDLGSAKDAALFQLLNLLEEFAQQQTTKIQPRLAEEQEPPKIEAPDATSRSSSICQ LMEDGEVADEGADMDMDICGGVSPLVVDKVQFSPLPKQEEDDELINTSGGGGFSLQSP PAKQQEEEFVRDASPVAVDKFPQTESPSSSTGSSSGSSSSSSSSGGSSGSSCSGCSSS GSDSNDDGDSASSRPDNSELPTEAAAKPLEQQQVTVCGGVSPLIDEFSPLPKQQEDDE LIDVTGGVSPVSVNKFPDSPRSSSSGSSSSSSSGSSSSSSESDSDDDGDSASSKPDTA DHPTEAEAPKLQPLEQHEVAEQDKKLIAERAASPNTEMQELIARAQERQKLRLELERK TARELERKMAREQLQEMERTARPVYDSIDPSVMKQLGISGDAQYIVSPVKSRHSLHRR GGGGLLQKLGFFLKE</aaseq>

Gene Sequence

<dnaseqindica>197..1942#ggtacccctccatccataaatctcgtttcgtcctcgcccgccgcctccgcttcccattcccgccgcccgcttcctccacctgatccttcgccctcgattcgctgcacttgatccgccgctgcgccgcctctcgattcgatccatctctgtgccctagctaccctcgcagcagagtccactccacccgaggtgcgacatggccgtcgggatggcgcctcctcctcccacggccgccgcgctgccgtcccgccgccgcctcagggagcggatccagtcggagcgccaggtggtcggcggcctcctcaagaaggcggaggccttggtggcccgcgccaaggaggacgtccatggcgggcgcgccgcggcggcgcactccgaggcctgcgctctccctcgccgcggccgtttcttgcgtcgtccggaggcccgaccggaggcggaggccaccgccgcgatggacggggctgcctctccccgcaagaagaggcggaaggcggcgacctccgcgagctcgatcgtggaggtggaggtgatcgagccgaccatgcccaaggcgcagagggaccgcctctacggcctcctctcctcgctgtcggcggagatgccattgccgccgcacatcgtggccttgatgcagagccagtgctgctgcgtcgtggaccctaatggcgaagagatggatgtggaccttggctccgcgaaggatgctgccttgttccagttgctgaacctgctcgaggaattcgctcaacagcagaccaccaagattcagccacggctggcggaggagcaagaaccgcccaagatcgaggcacccgacgccaccagccgctcgtcgtcgatctgccaactgatggaggacggcgaggtcgccgatgagggcgcggacatggacatggacatctgcggcggcgtctctcccctggtagtggacaaggttcagttctcgccgcttccgaagcaagaagaggatgatgagttgatcaacaccagcggcggcggcggcttctctctccaatcgccgcctgccaagcaacaagaggaagaattcgtccgcgatgcctcccctgttgcagttgacaagttccctcaaactgaatctcctagctcgagcactggctcctcttctggatcgtcatcatcttcatcttcgagcggtggctcatctggatcatcctgcagcggttgctcctcttcaggcagcgactctaacgatgacggagacagtgcgagcagccgccctgataactctgaacttcccactgaagctgcagcgaagccattggagcagcagcaggtcacagtctgcggcggcgtctctcccctgatcgatgagttctcgccgcttccgaagcaacaagaggatgacgagttgatcgacgtcactggcggcgtctcccctgtatcagtcaacaagttcccagattctcctcgctcgagcagcagtggctcttcctcctcttccagcagcggttcgtcctcctcctcgtcggaaagtgactcagacgacgacggcgacagtgcgagcagcaagccagacaccgcagatcatcccactgaagctgaggcgccgaagcttcagccattggagcaacatgaggtcgcggagcaagacaagaagctgatcgccgagagagcagcatctccgaacaccgagatgcaggagctgatcgccagggcccaggagaggcagaaactccggcttgagctcgagaggaagacggcgcgcgagctcgagaggaagatggcgcgcgagcagctgcaggagatggagaggacggcacggccggtctacgacagcatcgaccccagtgtcatgaagcagctcgggatctccggcgatgcgcagtacatcgtcagcccggtgaaatctcggcacagcctgcatcggcgcggcggcggcggcctgctacagaagctcggcttcttcctcaaagaatagcatgatccatcatcaatggtgtctgtaaagctctgtaggtttcttgtcacattgggatcatatgctctgagcctctgacaatgatctcatcagttgcttgctctcaagcctttgatgtacttaaaaccattgattagcttgcagctaagttatgctgtacatgtgtcttgtattatatctgattatatgaaattatgaatcgtcttaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0324000, RefSeq:Os05g0324000