Os05g0323900

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Revision as of 10:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0323900| Description = Manganese-superoxide dismutase precursor (EC 1.15.1.1)| Version = NM_001061730.1 GI:115463190 GeneID:4338417| Length...")
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Gene Name

Os05g0323900

Description

Manganese-superoxide dismutase precursor (EC 1.15.1.1)

Version

NM_001061730.1 GI:115463190 GeneID:4338417

Length

4649 bp

Definition

Oryza sativa Japonica Group Os05g0323900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:15024564..15029212

Sequence Coding Region

15024625..15024919,15027021..15027067,15027176..15027301,15027398..15027454,15028219..15028296
,15028950..15029042

Expression

GEO Profiles:Os05g0323900

Genome Context

<gbrowseImage1> name=NC_008398:15024564..15029212 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:15024564..15029212 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctccgcacgctggcctcgaggaaaaccctagccgccgcggcgctgccgctggctgcggcggcggcggcgaggggtgtgacgaccgtcgcgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcgagcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcgccatcaagttcaacggcggaggccatgtcaatcattcgatcttctggaataacctcaagcctatcagcgagggtggtggtgatccaccacatgcaaaacttggctgggccattgatgaggattttggttcatttgaggcacttgtaaagaagatgagtgcagaaggtgctgctttacaaggatctggatgggtgtggctagctttggataaagaggcaaagaagctttcagtggaaacaactgctaaccaggaccctctggtaacgaagggggccaacttggttcctttgttgggaattgatgtctgggagcatgcgtactacctgcagtacaagaatgtcaggccagactacctgagcaacatctggaaggtgatgaactggaaatacgcaggggaggtgtacgaaaatgcgactgcttga</cdnaseq>

Protein Sequence

<aaseq>MALRTLASRKTLAAAALPLAAAAAARGVTTVALPDLPYDYGALE PAISGEIMRLHHQKHHATYVANYNKALEQLDAAVAKGDAPAIVHLQSAIKFNGGGHVN HSIFWNNLKPISEGGGDPPHAKLGWAIDEDFGSFEALVKKMSAEGAALQGSGWVWLAL DKEAKKLSVETTANQDPLVTKGANLVPLLGIDVWEHAYYLQYKNVRPDYLSNIWKVMN WKYAGEVYENATA</aaseq>

Gene Sequence

<dnaseqindica>62..356#2458..2504#2613..2738#2835..2891#3656..3733#4387..4479#acctgccactcgcccactcctcctcctcccccatcctccagtgctacggtgtcacgcagccatggcgctccgcacgctggcctcgaggaaaaccctagccgccgcggcgctgccgctggctgcggcggcggcggcgaggggtgtgacgaccgtcgcgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcgagcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcgccatcaagttcaacggcggaggtgaggccaagtcccgccccccttaccccttcctcgcatacggctttctttctttctttttcttcgtcctgttcatcgcgggcgatgcgggcggcgggggatctgaggaattgggtggggtatttgtgtgctattgtggctgatctggattggtctggacgggagaggcagtgtgctcccccaaatggagaatcggattgggttgggggttttaggatcctcccatttctaggggtttaggtggttctggttttattatcggccgcgaatttaggtttaatactgtgttgtagtggtctggtacatacactattttttaaaacagttgagacatgtgttaactgcgtgggtgttttgagtataaaatttgaacaattttggtgcttgttatccacagttaggcgttagctgtcttgattgtcatttggttcaggtagtgattagttggtgtgcctttgattcctgcaaaatttgagctgttttatattaatttcctgtgtttgagaggggctcagtctaactggtcaggtagcgatccattgttgtaattttgctatccagtgcttctctaatttgatcaggcagttggatgaatgggtgatctgttaagcttcatttctaggtgaaagttctgtatgcggtaatgtactttgggctcgaatttgaacaattttgatgcatgttctctgcacttagctatcctgattgtcagttggttgtgcttttaaggatttgttcgcctaagataggatttgagtagattcagcattgggttcttgggcttgtgccatagtttattttaatctagctttcaacttttgaaggccctctttgttttatgttctagacatatctagtgtttgatggggtgtattgtcatcgcagaagttcgaactgcattgaattttgtgcttgtacaccctttaatttaaagggtatgttatgttatctcccatctcaatgccagaaattttcctgtctcctgtaaaaatttgagttgttttatgttaatttcctgtctttgagatgaactcagtctgattggtcagttagtgatccattattgtaattttgagatccatcgcttctttaatttgatcatgcacttggagaatggttgatgtattaagcttcatttctatatgaccagatgcgtttctactaaattagacagcaccatgatgcatccatgagctgctgatttattgagctcaggttgagctgcctttgagttggttccacagttgccaatttctctaataaaaatatatagagacaaattagtggtccccttttactatctcttcagaaaattttatttaactttgaagaaatagtttggtagtttcacttatattcatatgttggatgataatatacatgataaattggcgtaaggttcacaatttcacattacaccaaactatcagggtgtgtttggataatgggaaatggggagtgggattaggattgggaaatcaatgaagggttaggattaaatggaactggaagaatgaatggttaggatttaaagatgcatttttgtgggtgggaaatcatttccctatcccattagccaaacactccgtcaaagggaacagcaggtggtatggtagtaaagaggtatcctcaggacagggctacgttgttccagctgggacccaagctgccgcccactcccaacgctcctgtaggatggagctgctgtgtttgtgttattgtgtgagcgcggaattgaagagactagtgttcctttcttctagagcctccaaaaaatcaggatgggtgtgacttttgccagctcttagctaaattcttgcacttggatagacaccactgcaagaggaaccaaagccaaatcttccgagcatagacacaagaaataagcaaatggtcggcacacccctcctgaccatgaagcagaaggcttagtgggtgtccattcactgccggagcatctcatctgttgtctagattcattgatttgcaataaaaaaaattctagagttaatttattgcgatttcgttgctctcagatatctactctattcgttacaacaaagatattttcagtaatgcctttgtattaactgtgctgcaggccatgtcaatcattcgatcttctggaataacctcaagcctatcagcgtaattatccagtccatacaacttgctccatttctttcttcctccacttactttttttctactggatctccaatcaccgaattaatgaaaatattgggtgttttacaggagggtggtggtgatccaccacatgcaaaacttggctgggccattgatgaggattttggttcatttgaggcacttgtaaagaagatgagtgcagaaggtgctgctttacaaggatctggatgggtggtatgtacaccatgcattgctttatccattgatgtgtcatcctgttcagtctgaagaaatgtattgttcatttattatatttattttctcgtacagtggctagctttggataaagaggcaaagaagctttcagtggaaacaactgctaaccaggtgaaagttcttaactctttgtagattatattatttgcgcataataacaggatgtcctataccatgcagtctactcttgaacaacaacagttcaattcagtagattcttatcatttttgtcatgttttcaatgtctgttgagatagtgataaaaaacacttctgtaagatcaagggatggggattagcaatatggtacatcaatggttactgcagaaacacatcgttagaaacatatgcaataattttggtacattgggcaaggaaactgttattggatgcatgttcattgttctgataaaaaatggtaccgatcaatatgctagtggcttgctaaaatatgttactgcagtttagttaacatgtactgttgaaacaataccttgttcagcagtcctgcaattggatttcaagagttaagagcaaggacactatattttgtttaataagttgttatgacatggtacttaaaattaatgtgttttaccagtataagatgtattgtcttctgaacatactattttctaacatcctgtaaacttttatgaagtatctatgaattttcattgtttaatgaattctgaatatgactgttctaagtacatggcaagagtttgctgttctcatagttcagtttttgctttggctaatgtgttgagcaatatgaaattgtagccctactttctaaaggaaagaatacattttttttagcatcctacatggtgatttgataatagggcacagctgacttcttgcaatttgcaggaccctctggtaacgaagggggccaacttggttcctttgttgggaattgatgtctgggagcatgcgtactacctgcaggtaatctcatgctgttgtgggggtcagaggcacactcattgtttagttgctcttattctgctgttggttattattcctaatggcatgttgtaatttgcttatgttgttagtgttgctagcgccacatatgatgtgttcattgatcacaaattcacacttgaatgagttggacaacttattccccttgtagcatttgcactacgaagctattgcctttttttttaagataatggaaagaatcctgggctttacttcaaagaagctacaaccacttattacataattcactgaatgaagctactgcttgaaaatacggttcccattgttttccacaagacctaacaggagcagagtagaatgatatcacattgtttcatgggttatgtctcaaaagatcagagaaaatttaggagtagtaggatgtgactaggcatcgaatacgcatgtgcatgaatacaaaatgtgagtaccattgaagattactagtattgtacgttctgaacttctgatgtagtacatagtctgactatagaaggaatagttacctctggctgtttaacaacttacaacatcgtgcacacccaacttatttgtgcttcgaatttcaacctttgctattgctaaacagtcttcattgatttccgtggttgcagtacaagaatgtcaggccagactacctgagcaacatctggaaggtgatgaactggaaatacgcaggggaggtgtacgaaaatgcgactgcttgatgttgtctgaaggcaacgctcatggttttttttcacctagtactgccatggatctttgtatgcaataaaaatgggcctattgcacttctggaccttgtgtacattgcgtagaggtggactaatgcataacataatatgcctgagattttcttcttgtgctgctttcctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0323900, RefSeq:Os05g0323900