Os05g0344400

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Revision as of 10:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0344400| Description = Protein of unknown function DUF588 family protein| Version = NM_001061789.1 GI:115463308 GeneID:4338478| Length = 23...")
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Gene Name

Os05g0344400

Description

Protein of unknown function DUF588 family protein

Version

NM_001061789.1 GI:115463308 GeneID:4338478

Length

2313 bp

Definition

Oryza sativa Japonica Group Os05g0344400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16162255..16164567

Sequence Coding Region

16162255..16162446,16163955..16164087,16164278..16164567

Expression

GEO Profiles:Os05g0344400

Genome Context

<gbrowseImage1> name=NC_008398:16162255..16164567 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16162255..16164567 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgccgccgtagcagcctcctcgggcgcccccgccgccgacgtcgagaagggcgccgcggccgcagacgccaacgtcgacggcggcggcgccccggcggcggcggcggcgtcgggcgagggcgtggtgagcgccgtggtgcggcgctggcggcggcaggacctcctggagaagtccgggtcggcgctccgcgtcgccgcgtgggccttctccctcctcgccttcgtcgtcatgggcgccaacgaccacggcgactggaggcagttcgagcactacgaggagtacaggtacgtggtcgcgatcggggtgctcgccttcatctacacgacgctgcagctggtgcggcacggcgtacggctcaccggcggccaggacctgcagggcaaggtcgccgtactcgtcgacttcgccggagatcaggtgacggcgtacctgctgatgtcggcggtgtcggcggcgatcccgataacgaacaggatgagggaaggcgcggacaacgtgttcaccgactcgtcggcggcgtccatcagcatggccttcttcgccttcctctgcctcgccctctccgccctcgtctccggcttcaagctcgccaagcagacctacatctga</cdnaseq>

Protein Sequence

<aaseq>MSAAVAASSGAPAADVEKGAAAADANVDGGGAPAAAAASGEGVV SAVVRRWRRQDLLEKSGSALRVAAWAFSLLAFVVMGANDHGDWRQFEHYEEYRYVVAI GVLAFIYTTLQLVRHGVRLTGGQDLQGKVAVLVDFAGDQVTAYLLMSAVSAAIPITNR MREGADNVFTDSSAASISMAFFAFLCLALSALVSGFKLAKQTYI</aaseq>

Gene Sequence

<dnaseqindica>2122..2313#481..613#1..290#atgagcgccgccgtagcagcctcctcgggcgcccccgccgccgacgtcgagaagggcgccgcggccgcagacgccaacgtcgacggcggcggcgccccggcggcggcggcggcgtcgggcgagggcgtggtgagcgccgtggtgcggcgctggcggcggcaggacctcctggagaagtccgggtcggcgctccgcgtcgccgcgtgggccttctccctcctcgccttcgtcgtcatgggcgccaacgaccacggcgactggaggcagttcgagcactacgaggagtacaggtgagcgagcgagcgagctcccctctcccgccgcgccattgccccaagtgcactacccatccttgatccattgatggatgtctcgccgcctcggtcgttgtggtgcggcggcggcggcgacggtgaattgcttgcggcggtgaacacatttgaccgaacggttggtgggtgcttttttctctttgtgcaggtacgtggtcgcgatcggggtgctcgccttcatctacacgacgctgcagctggtgcggcacggcgtacggctcaccggcggccaggacctgcagggcaaggtcgccgtactcgtcgacttcgccggagatcaggtcagcgccgctcgccgcacgcctcgattatgcgttcctcggttgcactcttcctgctgacctctgttcaattaattgccgtgacatctatgcaatgcatcgaacatctgtcgcatcatctcgccgtaggagataaactcaaatttatttaatcaatcaaaagcattagccacttgcttgtttgcacaataggaaaaccggatggatacttggacaccggaatgaaacttaaatttgtttatcaattattcatcatttgcagagtgtggattgctcattgggattcaggttttatctttggtgttaagtaagggagcaattctttagttagggttttgagaattagctctgctgtagtgctaatgcacagcacgatcgtcctgacaactgttcatgggatgcagttgagcagagaattatagcgcaaagctgtcatgtgctggctggaattttgatccattccataggctgattgttaattagttgtcgttgaaagagacataatgagtccacatggcatttcccgtaacagttcatttcataccttacatacctctgcataatagaagttgtagtactaggattagtagttctcttcctactaatggtctgatgaacatcagccagcacagatttgtctggatcacaaattgcacatttcgatccatatggaaatgcaagaagctgtttgagtctgtttcaaaaaccactgacgagcattgagatatttaattgcatgagcccttggtttgatgatatgatatcaagtcgatctaaaataatgtcagagtttgtttatgattgatctcatatgttcgtggtgaccactgatcagagctgtttgcttacggaattgaggttgtggataaagacaaaatatgaagttgacaatgacctgtatgttatccaagtagcttcgcatctaagtttccttctgtcgaaattccaattaagcaaaattaaagacaaatgctctagagcctttgacttgatagcaggccggccattttaaacactacctgtaagaattagatacgctaagcatgtgcatgatggcaatacgaacctcggagtatctgaacataatatactatgtgcttaattaattaatgttgacagtgacctttatactatattcgtattttaataaatattccctcagttttagattctaaaatgttttgcctttggtcaaagtcaaactacttaactctaagtttgaccaagtttatagaaaaaagtaacatagttaatttttaacacatgcttaaccattatcttattcaaaagttttgaaaaaaatatataatatataaattatgcttaaagtatttttaacgataaaacaacccacaacaaatgtataataattaactatttttgaaataaaataaatgattaaacgtgttgtgcattatatattaaaaaatgaagctagtatatatacaatgcacgctaaaacactaatgttttatcgtggtttcgatacgcatatggtgctactgcaggtgacggcgtacctgctgatgtcggcggtgtcggcggcgatcccgataacgaacaggatgagggaaggcgcggacaacgtgttcaccgactcgtcggcggcgtccatcagcatggccttcttcgccttcctctgcctcgccctctccgccctcgtctccggcttcaagctcgccaagcagacctacatctga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0344400, RefSeq:Os05g0344400