Os05g0345500

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0345500| Description = Galactose-binding like domain containing protein| Version = NM_001187443.1 GI:297724016 GeneID:9271418| Length = 646...")
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Gene Name

Os05g0345500

Description

Galactose-binding like domain containing protein

Version

NM_001187443.1 GI:297724016 GeneID:9271418

Length

6462 bp

Definition

Oryza sativa Japonica Group Os05g0345500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16245299..16251760

Sequence Coding Region

16245557..16245775,16245872..16245940,16246037..16246117,16246208..16246272,16246365..16246389

Expression

GEO Profiles:Os05g0345500

Genome Context

<gbrowseImage1> name=NC_008398:16245299..16251760 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16245299..16251760 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcaaccctgttttagccaagtgacagcgagcagcccaaattccaggtacacggatccaaaggctttggtttcaaaaaattaccaggcgacttgttttgctgggcctcgtcttgaagatggcaagatgtgttcttggtggatggtagacattggaccggatcaccagcttatgtgcaactactacacggtgaggcaggatggctccgcgaccttcatgaggtcgtgggttcttcagggatcaatggacggccgtagctggactagcctgcatgtccacgaagacgaccagaccatctgccagcctggccagttcgcgtcgtggccgatcaccggccagacggcgttgctgccgtttcggttcttccgggtcatgctgacggccccggcgaccggcgtctccaacacctggaatctctgcatctgcttcctcgagctctatggctacttccggtga</cdnaseq>

Protein Sequence

<aaseq>MDQPCFSQVTASSPNSRYTDPKALVSKNYQATCFAGPRLEDGKM CSWWMVDIGPDHQLMCNYYTVRQDGSATFMRSWVLQGSMDGRSWTSLHVHEDDQTICQ PGQFASWPITGQTALLPFRFFRVMLTAPATGVSNTWNLCICFLELYGYFR</aaseq>

Gene Sequence

<dnaseqindica>5986..6204#5821..5889#5644..5724#5489..5553#5372..5396#atccgtcagtctgccagccgccgccgccgccgccgatccccatccatcctgcgaggcgcgagcgagcagggcgccgtcgttcgtcatgctgcttccgccgcatcctggtgagcacatcctccgccaccgccgcctgctgcgccgatccccatccatcgcgcgagcgagcgagcaggggtcgccgtcgttcgtccggctgcttccgccgcatccgttaccgcacatcctctttcccatctctctctacccacgctctcttcctcgaatctgcgttaaccgtagcttctgttgtagaaatttgccttgaccttaataccatctcccatgttagatccgccactgctagtggtagaagcattctcttcaccaaataactagctctatgcaaagcatccaaccattttaagtgaagatgaaccaacttagcttttctgttcattcactggatatataatttcttccttaagaaacaacacgatagctaaagcaccaacgagatacaggatatttaaaagaaaatgtaggttttcagcaaagtgtgtttgacttatttactaaggatcctatgctgagtatttatttagagggcttgtgtccaaatttatttgctacgtgtttctaaggccatttccaacccaataactaggatggtgtctatagcattaaataagatgccaactaggatgaaaaatgatatggcaagtgaataaatgaggaaagagaaggaaaccatgtcttgcatgagacatggtttctacacaacatccaagacatcatgtgagataagtagcattaaatttaagtatggaatagtggtgtttgcattggaagagtagtgtctagtactagtttcttgatgatgtggagtttatggaaactatgtctaatgtcttgggttgggaatagcctaattagattgctgatgaatatgggtagcggtatctgctgggttgtgttgtacagtattttaatttcactactattctcattggtgtcgaatatataaaggaatgtgatgcgagaattggctttctcttcattgtcagtagttgttgggtgcagattccttgggacgatgaatttggttgactgacccacagttagctataaacatgttttctatgcaaacaaaaggagagtaaaaaaactggatgatattagtcaatgttgtccttctatgcatgaactatttggttagttgaccactcatacatttttttgttatctcaattttctgacagatatttatactcattgacgcttgattgcccaagtttggtggtaaacgtgagtctcatggttccagtgacaattttattcagcatcgtgcatcatatctggttttttaacttgatataattctcgcgagaagaaattctacttccaacatttgaatattctgctgaataaattttctcatctattgaatgaggctggctgcttctttcttacaatagcatcagttgtttgtatacacaaatagaagtggttactctagccagactgtttatctgtacttttttttggccgagcttcttgcacacccaagcacatcataggcctctacaaacatgacttgcttattttactgattcctgtatttgcattgaagtttcttgcttgtgcggttctcaacaactaatggatatctgtagtcccttttctttttctttgtgcgcgtatgtgttccacttttctatcttgggtggtgtgcattacctctctagttatgactgacaagtgctctgtgctcctaccctatttgcctttgcagctgaaatctgtttacgatgaaagtggaggagaaaaaaagatctataacagttgcccccttcgagtgtgcttgggatgaggagtttcggttcagggagactggtcgcgggtgcatcacctttgaggcatctgcacacaatgatgttaccctggtgttccgcgaacaacctgggagccagcattatcactacaaaatggataacagtcgtcactacattgtgatcttgggcagccataggaacaaaagattgaaaattgaagtagatggaaagactgttgttgatgttgctggcattggcctatgttgctcctcgtcttttcagagctactggatcagcatctatgatggactgataagcatcgggcaaggaagacatccaaataacaacatcctgttccaatggcttgaccctgatcccaaccgaaatgttcagtatgtgggactatccagctgggacaagcatgttggatacagaaatataagtcttatgccatcagctcctcaaaacagcatcctttggagccaaattgagtgtgcatatgttgagccggatggtgctggagggcatacaagaaaacaagaatcaaaagatggcttagaccaaagggcacttgcaaactttctagagaactgggatttctcagattctatatttgtggttggcagcgaaagaaaggttgtcccagctcacaaagttgtcttgggttcttgtggtgatttcccttttaacctgatgatgagtcgaccagctattgagcttccatctgtctcctacccagttctgcactcccttcttgagtacatctacacaggttctacgcaggtatatttgagatgccaacttttgaatttaagaaagggtggatactgaaattattgattgcttttctgttgtgctgactatttggctcagatttcggaatggcaactggtttcactgctggagttgagttcacaatttaaagttaaaccattggtaatgtattgtgaagaaattattggctgtttgaagatgagtgatgcagtttctgagtctagcaaaaaaatacagttatcaagtggtggttctcaagctcatcaattttattatttccctttcaaagctccattaaatacacagaaaattgaacagttccttgtaaatggtgagcacagtgatgtaaatatctatgtaaatggacatggtcttgttactcatgctcacaaactcatccttagcttgtggagcatgacatttgacaaggtacaattttcttctcatgctgtatttctttatgtttttattacttcaaaatattcatatttcagcaatatgcttcatatctaacttattgcaaccaaagattgagtcatgaatgcacaaatgcagatgttcacaaatggaatgaaagaaagcagtgcttcaaatgtatttttcgaagatgttcccgtcgaagcattctttctcctcatccaatttatgtacagtggggaacttaaggtggatatcgaggaaatcacaccagtgttggttgagctgctcctattgtcagaccagtttgggatcacggctcttcagtttgaatgctgtaaaagaattatggaattcctctcaaaggtacctaatgttctctcttttatagagcaattcaccaacaaaagttactggtgcaatttacctgtcactattcaagacttaattggggacgcggtggtagtgacaataaaaagtggaggctttgcctcataaatcacatatatgagatattgatacaattccgtctgcattatgcatgcaggattcgtgtcctacaggaagaagctcatccaccagggctaatttctagtttttttatgggataattggatatggcttctgcaaatttggtgaatttgctagctggttcagtgtagacttacccctgaaagtttcttgcaggacacagtatgttcagttctacgagcagtttcgtcaattccatcttgtaaactgcttgaagaaatgtgcaagaggaattttgcagaacactttgattattgcacaactgcttgcacagactttgtgttgttggatgaggcaacatttaaggatattcttcaggcaagttgtactactgcttccatttcatgaacttccctgctactggaccaaataaaaataatgtcctcgagaacatagataaaggtgcccatcaagattgagcatcatatgaagctgtccagtttcatcattagtgttacattttacttgacaaatgaagatggctttccttagttttcggtattgcaactttgctactttttctggctgtaaggttgccagttaacggtgcccctcccaaaaaaaatacttgaacatttggtcattttaaaggatatttccttaaaaatcctacaaattttcagatatagtcggtcaatgatcccatgcattcagagagaacaagtgagtcgtcgcaaaaaaaaaagagagagagagagagaacaagtgagtgctatgaatacaggagagattacgaatgttctatttgacttcattttgtcaacatactaatatgaacattggtatgtttatctggtttatatatcttaatcttgtttaatattattataaacaaatgaatctatatggatgtgtaggctagattagtgcacattgtaaaaatgatatgcataacacatatgtcctacttaatttcagagaatcagattatgatcctgccaacattggtcatattagtgctaattttgcagcatgggcatatgactgtaacatcagaagagagggttctggatgccatattaacatggtgcatggaggcttgtgactgttttaactggacctctgtgcacgagctcttaagcacttcaagaccagagaaactctttggagggaggctcactgccatcaatactttgctaccatttgtgcggttccctttagtgcaaccatctgtccttcacctggtactgccttctcttgttatattgttctctttttctaataatagggccaggtgttgtgtcattcaataaaggagatgggcaaccatgcttgtcctaggaattgagcagggtgtatggggagattacagagcctatttaccactatgttgttgatttgttccctcgtgttattatactatggagcacttgccaccgtaagtttttttttctttttttttgcttctaaaattacccattacttcgctgcagatggagaaaagtaatctagcaaaaaacatagaagcgttcagacagttggttagtgactactagctctccaaagttaattgcatattagggatcatatttcatactttcagttggttagtattctgcacaggaaaagtacaattgatttactttctggatcacaggttgcagaagccattgagttctctaatgcgggactacggatggcaacaaatacatggtgagtgttgatgctttgatcaatacagagttgttttttctttactaactgttcatcaacctcaaaattcccagtgagagatttcatcatagacgctccagctataaagagcttcagtatatttcggatggtgataacaatggtgttatctactatgccggtacatcatttggtaaacaccaatggatcaaccctgttttagccaaggtaaatatggttatgctttgtttatgtatgaggccattacatgcaacaactttaatcacttatggctctcttctgtaattagaatattacagtgacagcgagcagcccaaattccaggtacacggatccaaaggctttggtttcaaaaaattaccaggtattattattgggaatggtaaaaatagcagtaaaactttactaaatcttgcttggaaattggaacgggtttgacatctagctacttcaggcgacttgttttgctgggcctcgtcttgaagatggcaagatgtgttcttggtggatggtagacattggaccggatcaccaggttcttatctgaaacaatgctcgtattttctcaaaccagcatcgggaataaactgtatcaacacttgtccaagtttatttacttctctttttgcagcttatgtgcaactactacacggtgaggcaggatggctccgcgaccttcatgaggtcgtgggttcttcaggtaaaccattttcctttcatttgtaccctgaccctgatgggaccacggatgtttatgagagtgaggtacctaaatcttgttgtgtgcggcgttcagggatcaatggacggccgtagctggactagcctgcatgtccacgaagacgaccagaccatctgccagcctggccagttcgcgtcgtggccgatcaccggccagacggcgttgctgccgtttcggttcttccgggtcatgctgacggccccggcgaccggcgtctccaacacctggaatctctgcatctgcttcctcgagctctatggctacttccggtgattgggacagctttgctgcacacccctgagaagagatcggcagtgagcaatgatctagctaggtggctctgtaatccggtgtgttcatatctgcactagtaaagaacttttcgttttagtttgctttggtcactttggttttttttttctttgcggtataattaccatagaaaaagtgaataatgcttatacgtccttgtaatacacatgtgtcatctgtaagttggtacaaaaccgtgattacacgaggaatgcttgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0345500, RefSeq:Os05g0345500