Os05g0345700

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0345700| Description = Conserved hypothetical protein| Version = NM_001187444.1 GI:297724018 GeneID:9267390| Length = 3674 bp| Definition ...")
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Gene Name

Os05g0345700

Description

Conserved hypothetical protein

Version

NM_001187444.1 GI:297724018 GeneID:9267390

Length

3674 bp

Definition

Oryza sativa Japonica Group Os05g0345700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16254448..16258121

Sequence Coding Region

16254710..16254782,16254969..16255269,16257364..16257892

Expression

GEO Profiles:Os05g0345700

Genome Context

<gbrowseImage1> name=NC_008398:16254448..16258121 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16254448..16258121 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcgtcgtcgggaatggaggtgttccaggacgcgcacttcgtgcggctgcggtgctccgtcgtccgctgcagcaagtacctcgccgccgaggacgacggccgcggcgtctgcctgtccggccagcgcggcgcccacaacacggtgtgggccgtcgagcacatcacgggggacgtccccggcgccgccccgggcccctacgtccgcctccgcggcgcctacggccgctacctcgtcgccaccgacctccaggcgaaggcgggccccgcgcacggcgtcaccgccgagcagcgcgacgccgcccaccacccgacgccgccgccctgggcgtggcaggcgttccgccgcaggagctcctccctcctccgcaacggcacggggcgctacctccgcgccaacgggaggtacctccggtggcgcaccgccgtcaccgtcgccggcgacaacgccagcccgatgatgctgtgggcggtggaggtcgtcccgccaaagcctggccgcgtcaccctcgtcgatcgcccggcgcagctgatacggcggcggcgaggaccggcgacggagggggagacgagccgggtgatccggttcgtgaggggggacgagggaggggagttcgaggagagcgagtggagggcgttgcgggtgaacaccaacagcctgatgcacctgcgcctcacgctggccaacctgctgggccacaaccgggacgcgctccacaccaccgtctgcgtccgcgccggcgcctacgcccagctctcccctctcctcgtcgacctccccatcggcaacgaccgcatcgacgtcgtcgtcctctcgcatggcacaccagcggaagatgcgttgaagtacccctgtgtggatgcttgatcgagcagaagaagaatagcaataaggtgtcctga</cdnaseq>

Protein Sequence

<aaseq>MIVVGNGGVPGRALRAAAVLRRPLQQVPRRRGRRPRRLPVRPAR RPQHGVGRRAHHGGRPRRRPGPLRPPPRRLRPLPRRHRPPGEGGPRARRHRRAARRRP PPDAAALGVAGVPPQELLPPPQRHGALPPRQREVPPVAHRRHRRRRQRQPDDAVGGGG RPAKAWPRHPRRSPGAADTAAARTGDGGGDEPGDPVREGGRGRGVRGERVEGVAGEHQ QPDAPAPHAGQPAGPQPGRAPHHRLRPRRRLRPALPSPRRPPHRQRPHRRRRPLAWHT SGRCVEVPLCGCLIEQKKNSNKVS</aaseq>

Gene Sequence

<dnaseqindica>3340..3412#2853..3153#230..758#gccgtccactgaaaccggccgccgcgcagtcgccttcgtctcgtacgtgcgtgcaaccaacatcccggcggcgagctcgtacgtaccaaatcgatcgatggagtgtgcgccggccgctgtacatctccggcgacgacggcgactatagctcgatcgaactgatatcgtcctgtcggctttgctcatggtgccgatcggcctcgcgatgaaagtatagtcgttggcacaaatgatcgtcgtcgggaatggaggtgttccaggacgcgcacttcgtgcggctgcggtgctccgtcgtccgctgcagcaagtacctcgccgccgaggacgacggccgcggcgtctgcctgtccggccagcgcggcgcccacaacacggtgtgggccgtcgagcacatcacgggggacgtccccggcgccgccccgggcccctacgtccgcctccgcggcgcctacggccgctacctcgtcgccaccgacctccaggcgaaggcgggccccgcgcacggcgtcaccgccgagcagcgcgacgccgcccaccacccgacgccgccgccctgggcgtggcaggcgttccgccgcaggagctcctccctcctccgcaacggcacggggcgctacctccgcgccaacgggaggtacctccggtggcgcaccgccgtcaccgtcgccggcgacaacgccagcccgatgatgctgtgggcggtggaggtcgtcccgccaaagcctggccgcgtcaccctcgtcgatcgcccggcgcaggtagtatacatacgtcaaaagtattttctacacgaccacctatgtggtatgcatacagtttaagcggttctaaaaatatataaatctttttctgattaaacggtacacgcacacaccattatacacgacacaccacactcacaccccgcaaatgtatcctggcccctaacacatgctcaagggacaaaaacgaatgacacatccctaatctcaccaaaattatgttgaaagtccacttgcaaatgcataatattcgtgggcatcaggatttgaacccttgtaggtagagttatgcactcacaactccaccaccatgtcactagtgttttctcaaaatttataaagagatagattgtgataatataagacactatacagatatgtaagtctaaattcgatttacacatgaagaaaaaagggataagtccattttacaccccccaaacttttatgtttgtctaaaatacacccccaaactataaaaccaggtatttgacaccctccaactatcaaaaccggacattttaccccctaaagctgttttagactggttttggaagccacgtcagcataggtctcaccagtcaaacaatcctcctttttttcccctaagctcgctgagaagccggcgagctccctccctccgtcagcttcgtccccggcattctccctccctccatccctccacggctccacccacccaccgcccccacccccttgatgatccatcaacatccatgctgaggggggagatgctgtggcgagcagcgagcggcgagcaacgacgcgagatatcatctgatggggcggcgcctagagtagcgagaggtcgaggagatcattgccgcctccctcacgaatcacaagcttgttctccccgcgcgggagacgcggacctcgccgaagccacacgcgcgaggagtcatcccagcatagcgtcgttgccgcctggttgaggatgaggagtcgctcagggaggaggagctcgagctcgccggcaacaaccagcgcgcatccgtcttcgtttccgccgtgacggcgacgccacggcccctgtcccttcatccccgtgctcgtccccaccccttcatctccccatcttctccaatcttggccgagggggttggctctgctgtgctctttagcggcgagtgagtagaaggagggaagagagggaaacgcaacgccatatgatggacgcggaagtcgaggacggtgcgaccagcggcaatggatggatgcgaagaataggatcaacacaaccggtgtccacgagctagctccgtaatcaccggttgcctcgctccatctgcacaaccgaagactttgaatggcatgtaaaaaaaaagaagattggaccaaaaacaattaatctgaatgccatgtcatttgccacgcaggctaaaaccgtctaatctgaaacgagggggtcatttaaacggttttgataattggagggtgtcaaatacccggttttatagtttaggggtgtattttagacaaaggtaaaagtttgggggtttaaaatggacttatcccaagaaaaaataacaaatattagctgtgatgtatgggtactattcactatctaattttattgttttgtttctctggttttgatcaaatttagtcatatatatttgtctgtaaatttatatcatcctaagggcacccacaatggttatctataggctctctataagagattcatgtcagcatattttcctacttggaagagattaaataaagagagagcaaagctatctactaacctggagatagtctatagagaaaaacgaggcaatgtattagagagctatagatacacacgtagacatactattgagatggtttactattaatctagtctattgatgagatgtacatgttttatagatagcaccttactttaccattgcgggtgctctaagtgatactagtactatttttttaatcttttatatagctatttaaaccgaatgcaaataacgatgtcatgtcatggtacccttgtcgattgccttggatgatctatcgccatgcaagcatatatgcaattaactcctcttgatggatggatcgttgggcggacagctgatacggcggcggcgaggaccggcgacggagggggagacgagccgggtgatccggttcgtgaggggggacgagggaggggagttcgaggagagcgagtggagggcgttgcgggtgaacaccaacagcctgatgcacctgcgcctcacgctggccaacctgctgggccacaaccgggacgcgctccacaccaccgtctgcgtccgcgccggcgcctacgcccagctctcccctctcctcgtcgacctccccatcggcaacgaccgcatcgacgtcgtcgtcctctcgcatggcacaccaggtccgtcggatctttctcaccgataatcgaattgatattaattaattgctcgttgatctactgttgcaagagcttaattagctcatcatcatcattcgttcacttgttcgtattaccaagtgcatatatatgcctgcctgctgattttcttctcttctactcgatgtactgttgatgaaatttcagcggaagatgcgttgaagtacccctgtgtggatgcttgatcgagcagaagaagaatagcaataaggtgtcctgacacctgacatatatatatgcatcgacaaattaaagccagtgcttaattaatcgggcatccgcatcctacagaagtgcataagatcaaaagatgacggacattaggatttaatctgctctttttgtgtcacttggatatataagtacttggattagttgcttcagtagttcagttcagtgtaatcctcggtcatggtgaatattgtacttagagattgatgcacatacgcattattaatggcaaatttattgcaaaactactt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0345700, RefSeq:Os05g0345700