Os05g0346200

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0346200| Description = Similar to Ethylene response factor 1| Version = NM_001061795.1 GI:115463320 GeneID:4338484| Length = 3312 bp| Defi...")
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Gene Name

Os05g0346200

Description

Similar to Ethylene response factor 1

Version

NM_001061795.1 GI:115463320 GeneID:4338484

Length

3312 bp

Definition

Oryza sativa Japonica Group Os05g0346200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16274887..16278198

Sequence Coding Region

16275185..16276081

Expression

GEO Profiles:Os05g0346200

Genome Context

<gbrowseImage1> name=NC_008398:16274887..16278198 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16274887..16278198 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggggaaaggaggaccggagaatacacgttgtgacttccgtggtgtgaggcaacgtacctggggcaagtgggttgctgaaattcgggagccgaatcagcaaagtagactctggttggggaccttcccaactgccgaagctgcagcttgtgcttatgacgaggcagccagagcaatgtatggtccaatggctcgcactaattttggccagcatcatgcccctgctgcttccgttcaggttgcactagcagctgtcaaatgtgctttacctggtggtggcttaacagcaagcaagtctagaacatccactcagggtgcatcagcagatgttcaagatgttttaactggtggcttatcagcatgcgagtccactacaacaacaattaataatcaatctgatgtcgtctctaccttacataagccagaagaggtttctgagatctctagtccactgagagctccaccagctgtcctggaagatggttctaatgaagacaaggctgaatcggttacctatgatgagaacattgtcagccagcagcgtgcccctcctgaagccgaggctagtaatggaagaggcgaggaggtctttgagcctctggaacctattgccagcctaccagaggaccaaggagattattgttttgatattgatgagatgctgagaatgatggaagctgaccctacgaacgagggtttgtggaaaggcgacaaagatggatcagacgccatcctggagcttggccaggatgaacctttctactacgaaggggttgatccaggcatgctggacaacttgctcaggtctgatgagccagcatggttattggcagatcctgcgatgttcatctccggtggcttcgaagatgactctcagttctttgagggcttgtga</cdnaseq>

Protein Sequence

<aaseq>MKGKGGPENTRCDFRGVRQRTWGKWVAEIREPNQQSRLWLGTFP TAEAAACAYDEAARAMYGPMARTNFGQHHAPAASVQVALAAVKCALPGGGLTASKSRT STQGASADVQDVLTGGLSACESTTTTINNQSDVVSTLHKPEEVSEISSPLRAPPAVLE DGSNEDKAESVTYDENIVSQQRAPPEAEASNGRGEEVFEPLEPIASLPEDQGDYCFDI DEMLRMMEADPTNEGLWKGDKDGSDAILELGQDEPFYYEGVDPGMLDNLLRSDEPAWL LADPAMFISGGFEDDSQFFEGL</aaseq>

Gene Sequence

<dnaseqindica>2118..3014#gcctttccttccgatctctctccctctctctcttcttcttcttcttccttccctctcaacccgacgacccacgcgaagcgaactctcgcgcgagacgagagtagtaaaccctagaaacctagaggagatccccaccaccaccatgacggtggatcagaggacgacggcgaaggcgatcatgccgccggtggagatgccgcccgtccagcccggaaggtgagatcttgctctccaacatcccttcactttcccctctctcttgtggttacttttagggggtggggtggttcgagtttgggcgggagttaggggttgggggttcgctcgattcgttggtggatcgagcgattttgggtgtatgggttgtggattttaggttggattggttgtatttgggcggggttgggtgctagggttggtggaatttggggggctagggtttcaggatctggttattttgcctgaatatgaattgggggtgaagggtgcagggttggattgtggggggtgaccgtgcggtgtagggatcatggaagatgttggggattttgttgggttgaaagctgggacagggtgggcgattgggggaggtgggatctctggatccccttttaattgggcggcagtgctttgctggagtccaaatcaatcgttgtgaattccatagctaatgtttgtagttgtatatattataggtaaattgagtgttttgggttcgaacccctttgcaagtttcggttttttcccctactgtgggtgactttggtagtagtattgtttcaatggtgtgattacctgttgattttgtgtgagactgttcgaattacttgttgtttagagtcttgagtagcaaagttatactactatggttctagtcagcaccatctccacagaaacgtgtcgtatgccccgagtcatctaacttaatgtcattctttgttgctgtacactgctgttatatttttgtaatttttgtcagtttaacttcgtaatacagtctctgatacatgtatgtctatttgtcttgtcttttggtaattagaaaatgtggaggcgaggaaagtactggaaaccttgattccgtccaaccgataggtatgactgctttgatttgaacacctttcgtaaacaggaagtactgattgagatgggtcccttgtgtccagcagtgaagtgtgagcacaaaataactgcttgtgtttcagcaggagctcttccctgtaatgagcatgcactcttggcccagcagacccccaagggagatgcgccatcagtgggctctaagatttggtgtgtttaaccgttctgatatgtctggcttgctcaatttgttggagcatgcgggctatgactaccaggcttaactggttttttagtatagagctgcacgaaagtattttttttccttgtcttttcaccagctggtttctgatcagctggtttaagcatattcggtttctctcttgatttgatcctgttcagctgttacattgtgtgaaatggaagaaacaataactgagtaggtccagtgaataaaataagcatcagtgcttttgagatgttacgagtatttttctaaacaattagctcgagcttgattgattgagtgaaatagtacatctatgtgcgtgttgcttgtatgaacttaaggaattgttcgcagaattcattgaaatgaataactggcaaattagagtttagttatcaagcgtgattatcatcataatagtacctgtttctgtggatatggtctgtttgtaggaacatatgaaagcatatgtgtttgtggagaacagttgatggcactggggttattgaacgcgtttagttcatgtttctgtggagatggtctaccttgtgggaaacattcattgttctgttctgctatgtccttttcccttggttatgtggatattttccctgaatctgtagaacaattactaaagttaagctccttgtttagcaggaaaaagcgaccacggagatcacgcgatggacctacttcagttgcagagaccatcaagcggtgggccgagctcaacaatcagcaggagcttgatccacagggtccaaagaaggcaaggaaggcacctgcaaagggttcaaagaagggctgcatgaaggggaaaggaggaccggagaatacacgttgtgacttccgtggtgtgaggcaacgtacctggggcaagtgggttgctgaaattcgggagccgaatcagcaaagtagactctggttggggaccttcccaactgccgaagctgcagcttgtgcttatgacgaggcagccagagcaatgtatggtccaatggctcgcactaattttggccagcatcatgcccctgctgcttccgttcaggttgcactagcagctgtcaaatgtgctttacctggtggtggcttaacagcaagcaagtctagaacatccactcagggtgcatcagcagatgttcaagatgttttaactggtggcttatcagcatgcgagtccactacaacaacaattaataatcaatctgatgtcgtctctaccttacataagccagaagaggtttctgagatctctagtccactgagagctccaccagctgtcctggaagatggttctaatgaagacaaggctgaatcggttacctatgatgagaacattgtcagccagcagcgtgcccctcctgaagccgaggctagtaatggaagaggcgaggaggtctttgagcctctggaacctattgccagcctaccagaggaccaaggagattattgttttgatattgatgagatgctgagaatgatggaagctgaccctacgaacgagggtttgtggaaaggcgacaaagatggatcagacgccatcctggagcttggccaggatgaacctttctactacgaaggggttgatccaggcatgctggacaacttgctcaggtctgatgagccagcatggttattggcagatcctgcgatgttcatctccggtggcttcgaagatgactctcagttctttgagggcttgtgatttccccttggcggcagccggccatactaaaattttctggtgctttggtcggctagctcctgcacatcgccctcaggatcagcaagagaaacactggaccggattgggttcgttggtggaactggatgagcatctagtagctaaggaaaaaagatccttttatttagttctgtaggcaatggaactccttgagaactccgtttcagtgtttgttaatttgataacgcttgcttgtttgtgtgtgtatatcgatctcttttgaagcaatgagaaaaaaaaaaggactgaagaaaatgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0346200, RefSeq:Os05g0346200