Os05g0350600

From RiceWiki
Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0350600| Description = Similar to Atranbp1b protein| Version = NM_001061810.1 GI:115463350 GeneID:4338501| Length = 2683 bp| Definition = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0350600

Description

Similar to Atranbp1b protein

Version

NM_001061810.1 GI:115463350 GeneID:4338501

Length

2683 bp

Definition

Oryza sativa Japonica Group Os05g0350600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16537650..16540332

Sequence Coding Region

16537699..16537874,16537989..16538140,16538328..16538453,16539699..16539907

Expression

GEO Profiles:Os05g0350600

Genome Context

<gbrowseImage1> name=NC_008398:16537650..16540332 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16537650..16540332 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacaaggagcccgtcgtggaccgccccgaggacgaggaggaggcctccgccgccgccgccgccgcgggcggcgaggaggaggacacgggcgcccaggtcgcccccatcgtgcggctcgaggaggtcgccgtcaccaccggcgaggaggacgaggacgtgctcctcgacatgaaggcgaagctttaccggtttgacaaggaggggaaccagtggaaggagcgggggacgggcaccgtcaagctcctcaagcacaaggagaacggcaaggtccgcctcgtcatgcgccaggccaagacgctcaagatctgcgcgaaccacctagttgcttcgaccacgaagatgcaggagcatgcgggcagtgacaagtcgtgcgtctggcacgcggcggacttcgccgacggcgagcttaaggaggagatgttcgcaatccggtttggctctgtcgaaaattgcaagaaatttaaggatttggttgaagagatttcggaatcacttgcaaagacagaaggcaaagaaaccgaggaagattcgtctgccgctggccttctggagaaactcagcgtaactgaaaagaagtctgaggaagtggcgacaaaggaggaatcgaccgaagcagtcaaggagactgacaccaaatcagctgccacctcagagtaa</cdnaseq>

Protein Sequence

<aaseq>MADKEPVVDRPEDEEEASAAAAAAGGEEEDTGAQVAPIVRLEEV AVTTGEEDEDVLLDMKAKLYRFDKEGNQWKERGTGTVKLLKHKENGKVRLVMRQAKTL KICANHLVASTTKMQEHAGSDKSCVWHAADFADGELKEEMFAIRFGSVENCKKFKDLV EEISESLAKTEGKETEEDSSAAGLLEKLSVTEKKSEEVATKEESTEAVKETDTKSAAT SE</aaseq>

Gene Sequence

<dnaseqindica>50..225#340..491#679..804#2050..2258#cccgaaacttctggaaccgagagcagcagacgttagctcttctcctccgatggcggacaaggagcccgtcgtggaccgccccgaggacgaggaggaggcctccgccgccgccgccgccgcgggcggcgaggaggaggacacgggcgcccaggtcgcccccatcgtgcggctcgaggaggtcgccgtcaccaccggcgaggaggacgaggacgtgctcctcgacatgtgagccccccccgccgccgccgcttgctctctctcctcttctcccctctcttgtagctcgtgtgctttttttcggttcgatctggtggcgctgatccgcgcgattgtttgcaggaaggcgaagctttaccggtttgacaaggaggggaaccagtggaaggagcgggggacgggcaccgtcaagctcctcaagcacaaggagaacggcaaggtccgcctcgtcatgcgccaggccaagacgctcaagatctgcgcgaaccacctaggtttctccccaaactaatttcctcctccgaatttccccgcctctctctctctctctctctctctctctctctctcttctcttcgggggaggattggttacagatgttgcaatcgcggtgcctgtgtagtatagattcatgtggcccaataacctcgttgctaaggctttgtgtcgtcttgtgtgcagttgcttcgaccacgaagatgcaggagcatgcgggcagtgacaagtcgtgcgtctggcacgcggcggacttcgccgacggcgagcttaaggaggagatgttcgcaatccggtttggctctgtcgaaagtgagttgttcgctcccgtcgtctctgggctaatttgttctgttgtagtcgtatctactatgtagtgtggttatccttgcttggtagtattatgttggatcatgccgtttgcttttgttcatggtggcaatagtagttttcctatctgagattccgttgaacgttgatgggttgcaatttttgcttaaccaaagttgtgcttaagaacatgttgaattgggggtacttgtgaatctattggttgtttcatatgatgtttctatgaggagtgttggatagctaaccttgaaggattttcgcacgctttggatcggatgggtgggataacataggggcaccaattcccctggtcttccctgtcattacagttttcatctaatttttaccttaataattattgagatttgtcatgttcaattttaagattctgttattagaccctatgaggtaaactggagatgggacaccatgatgtctctctgtttatgttgctacttgctagtcatgtggagaacaatcttactgaaacttaaaatgtacagaataataatgaactagactggtccatgatatttaacattctgtttacctcatgttttgttttttactccctccgtttcacaatgtaagtcattctaatatttgccacattcatattgatgttaatgaatctagatatatatatccatctagattaattaacatcaacatgaatgtgggaaatgctagaataaacggaggaagtatgtggtaaagtacacttgatatgtataattcccaatgtatatttttgtgtagctatccaggtgcacactgttgtggtagaacacaggttgtttgctcttgctggccattggcttctttaggcactattgcggtagaatgatttaggtacacactgttgtggtagaaaaaataggctttctttgtgttaacacatttttagcagtcgttacagattacattctttcattccttgtctgtaaaggtgaagtagtgaactttgtaactttcatgtgtttgtgggggcatctttttcttgaatagtacaatataatttttgccattagtaatgaacgtgtttattattatgtagctacaacattatgtctagtagcatctgcatgagcagcatcctcttcatctactatgttccatttgttgcacatatttcattctgttatttgaatcttctgaaaactatctgaatttaactgactaagattcctatcatataattcctagattgcaagaaatttaaggatttggttgaagagatttcggaatcacttgcaaagacagaaggcaaagaaaccgaggaagattcgtctgccgctggccttctggagaaactcagcgtaactgaaaagaagtctgaggaagtggcgacaaaggaggaatcgaccgaagcagtcaaggagactgacaccaaatcagctgccacctcagagtaatcagcagtgtgttacctccagaacactagtgctcggtgggaagggtaagtttgtcagtgcttcccgtctatggaagttaaaagtcgttagccatgagctatgttgagaacatttgggcagagtcggaagatgtcagggtcatctttacctattgggcgttcacttgttattatttatttgtttgtgtatggtttctgcttagagtcgcaggttggcttttggatcaggtctgttcggatctcgcttttatcgagaacacgaaatgtagtccatgagtaggacgagttggaacgttttgggtccgagttacgagtatcttgacagcaagatgtttatggatgcgtgctattcatataaattacatgataccatgttcaactctaatccagttgctatgggaaagacgatatttcatttctatgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0350600, RefSeq:Os05g0350600