Os05g0357800

From RiceWiki
Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0357800| Description = Phospholipid/glycerol acyltransferase domain containing protein| Version = NM_001061834.1 GI:115463398 GeneID:4338527...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0357800

Description

Phospholipid/glycerol acyltransferase domain containing protein

Version

NM_001061834.1 GI:115463398 GeneID:4338527

Length

4347 bp

Definition

Oryza sativa Japonica Group Os05g0357800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16955650..16959996

Sequence Coding Region

16955885..16955992,16956121..16956261,16956660..16956793,16957164..16957232,16957715..16957779
,16958164..16958201,16958307..16958426,16959407..16959946

Expression

GEO Profiles:Os05g0357800

Genome Context

<gbrowseImage1> name=NC_008398:16955650..16959996 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16955650..16959996 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctctccctctccacgacgccaccacctccccctccgaccccgacgacctcggcggcggcggcgaggaggaggaggagaggctcgcctcgaagccgctgctctcgtccccgtccacctatccttccgcggggacggaggagggcgtcgaggagctggagctcgaccggaggtacgcgccgtacgcgaggcgggacgcgtacggggcgatgggccggggccccctgggcgcggcgggggcggggcggctggcggtgggcgccgccgtgctcttcccgctccggctcgccgcgggcgtgctcgtgctcgtcgcctactacctcgtgtgccgcgtgtgcacgctgcgtgtggaggaggaggagcgcgagggtggcggtggcggcgcggctggagaagtggagggggacgggtacgcgcggctcgaggggtggaggcgtgagggcgtcgtgcggtgcggccgcgcgctcgcgcgcgccatgctgttcgtcttcggcttctactggatccgcgagtacgactgccgcttccctgatgctgaggatgagcatcaggaacagtccaaagaattgggaagaccaggggcagtagtatctaatcatgtatcttatgtggatattctttaccacatgtcatcttccttcccaagctttgttgccaagagatcagtggccagattgcccatggttggtctcataagcaaatgtcttggatgcatttttgttcagcgggaatctaaaacctcagatttcaaaggcgtttcaggtgctgtgactgagagaatccaacgggctcatcaacagaagaattctccaatgatgctacttttccctgaaggcacaactacaaatggtgattatctcctccctttcaagacaggagcatttcttgcaaaagcaccagtgaagccagtcattttaagatatccttacaagagatttagtccagcatgggattcgatgtctggggctcggcatgtatttctgctcctttgtcaatttgtaaataaccttgaggtgatccatttgcctgtgtattacccatctgagcaagagaaggaagatcctaagctgtacgcaaataatgtacggaaattgatggcagtggaggggaacttgattctttctgatcttgggctagcagagaagcgtgtgtaccatgcggcattgaatggtaataatagtctacctcgtgctttacatcagaaagatgattga</cdnaseq>

Protein Sequence

<aaseq>MALPLHDATTSPSDPDDLGGGGEEEEERLASKPLLSSPSTYPSA GTEEGVEELELDRRYAPYARRDAYGAMGRGPLGAAGAGRLAVGAAVLFPLRLAAGVLV LVAYYLVCRVCTLRVEEEEREGGGGGAAGEVEGDGYARLEGWRREGVVRCGRALARAM LFVFGFYWIREYDCRFPDAEDEHQEQSKELGRPGAVVSNHVSYVDILYHMSSSFPSFV AKRSVARLPMVGLISKCLGCIFVQRESKTSDFKGVSGAVTERIQRAHQQKNSPMMLLF PEGTTTNGDYLLPFKTGAFLAKAPVKPVILRYPYKRFSPAWDSMSGARHVFLLLCQFV NNLEVIHLPVYYPSEQEKEDPKLYANNVRKLMAVEGNLILSDLGLAEKRVYHAALNGN NSLPRALHQKDD</aaseq>

Gene Sequence

<dnaseqindica>4005..4112#3736..3876#3204..3337#2765..2833#2218..2282#1796..1833#1571..1690#51..590#atgcctacccactgctagggtttgcccctaagccccccaccctctccgccatggctctccctctccacgacgccaccacctccccctccgaccccgacgacctcggcggcggcggcgaggaggaggaggagaggctcgcctcgaagccgctgctctcgtccccgtccacctatccttccgcggggacggaggagggcgtcgaggagctggagctcgaccggaggtacgcgccgtacgcgaggcgggacgcgtacggggcgatgggccggggccccctgggcgcggcgggggcggggcggctggcggtgggcgccgccgtgctcttcccgctccggctcgccgcgggcgtgctcgtgctcgtcgcctactacctcgtgtgccgcgtgtgcacgctgcgtgtggaggaggaggagcgcgagggtggcggtggcggcgcggctggagaagtggagggggacgggtacgcgcggctcgaggggtggaggcgtgagggcgtcgtgcggtgcggccgcgcgctcgcgcgcgccatgctgttcgtcttcggcttctactggatccgcgagtacgactgccgcttccctgatgctgaggtatgtagtccttgatgattctacttctccacgggacgcctcctccgagttttgtgtttaccgttgcttgcttcatatctcagtagattgatattgtgaccaattttgtttacaaaaaatgataatatgtcacttcttaggtagcagcgcctaatggctggttggattatgaatgtcgattttgtactctggctgttgaaattggaaatacatattagagccgttctgcaatttactttatatctactgggtgagggttgggtaatgcttgtttgtgctggcataggtgttttttggactggttcacaagtggttctggtatatgttctgatagctgatgctagaaattagcatgcaaatgcacatcctgtcagtttggcatgtctttatcagtggacttctaacttctgtgaaggcttgcttatttgctgttgtctctcacgacatgatgcatgccttgtgttcatttttggtggaaatgtgctaatattatacagctcttggtgatccttcgaataaactggcacctttaaatagtataatagtgtaatgtgatgataattggttatcgtggtaattttatttcattgcttagttcaatattatgatgataatatgctggatcaggtggtggttttatgcccttggttagcctccagtaggtgagaataagataacgattgagttctagtgaccggaatgatgttcagaacttgttctgaattataaatatgactctgacagatttattttgtttcttatccaagatggatatagattttttggtgatatggtgttgttctaagatggttaaatgttttaaaggattttgcccatattttgggacaagtagtagggaacattattaaggaataatagtctccaagcagctcaattttctttttcttgaagtatgaagttttaatcagtgcctcttgtatctattttatatatccaactgggtactctgttttcttcaggatgagcatcaggaacagtccaaagaattgggaagaccaggggcagtagtatctaatcatgtatcttatgtggatattctttaccacatgtcatcttccttcccaagctttgttgccaaggtactgcaaatatgttgtaactttgtttttgtacttgtaattttgaaaaactgtcattacaatgtactcattttgacttgtctcttttacacatcatttttgaagagatcagtggccagattgcccatggttggtctcataaggtacttgcattcttgtttggatttgcctcagttgtgtctgtacttttggtaaaaaaggaaaaaaaatcttacaattttgtcctgtgtgtctatctctagatacaagtcactattcaatgttttgaccattaacaatattctgtatcgattaaccatgtgaaattaacttcacttgaactttttgcaaaatgacttcatgatgtatatttttatttttattcccttttctactatagtatgaatgtataacaacatagtacagccattttttttaagagcatatatctgttgatagagggagtacagagagtagaaaaatagttgggtttattcagatgccgcatacagccgtacatttacaaaatgacttctgttttcatgcagcaaatgtcttggatgcatttttgttcagcgggaatctaaaacctcagatttcaaaggcgtttcaggtacttgctgaatgctgatgtccatagccttgagtcaatcatttacttgtattgccttaacttcaggtcagaacagcatattttccctttcattaagagttcacatctgagatgtgacttgcacatgagcgtggccacttaatttggccaaattgacaacatagcatatatgcgcatcagagtggtgaaacatgtaaaacataaaggggccttgatcaaaaagtacattttcttcttcataatgaccaaaagttcacaggattgaagttcaaaatagtgtgatgagatatttacaccacagtaactgaactagattacagcactcggtgcacttctactttctaaaatatttctgtgacggggcagctatgtcctttctgttgtatatatggcttcattttctgttgtcatgaatattgttaataccacttagctaaagtattcagtttgttgttgcttttgctaatccattcaatgcacaggtgctgtgactgagagaatccaacgggctcatcaacagaagaattctccaatgatgctacttttccctggttggttcctgattattgttttggaccctttcagttttgttactaacttagattaaggataatatcaatccatccaacactaaatgtataactttagttgcagcgatttctctctctctctttttttttaatttttaatgcaaggaatacattgagattgtttactgaattcccttttgaaaatggaaaataatgaacatatccaacacaatttaacatttttactgaaaggcaaacaagaatgtagaactatggtatatgatctgaaagtatatttaatacatcactctctaaattgcttcactttttatgtaattattttcttatgtatcatatgtaaatactgggctgttgcattcttctattacagaaggcacaactacaaatggtgattatctcctccctttcaagacaggagcatttcttgcaaaagcaccagtgaagccagtcattttaagatatccttacaagagatttagtccagcatgggattcgatgtctggggtgagtatcaatgacttttatatctttttattcatatacccttaaagctggcaagtgtttggcttgaaggccatgcaaggcagtgtctgccttgccaaattttacttctttggcttgtatttggccccacttggtttatcgtcaaattcttctaaggtttcttactttctttagcattggctctacttcattctcttttaaatacttggtaatgattatccagtgctatgcgccaagccatctatgtgctttttagaactttgtgagtttgatgtcatttttactaatcatatgctgaacaatttcaacttgtcgctccttcatctgtttaacttatctatatctcatgggaaacttgtatctgttcaaccttactgaatctcatgaaaaattttcaggctcggcatgtatttctgctcctttgtcaatttgtaaataaccttgaggtgatccatttgcctgtgtattacccatctgagcaagagaaggaagatcctaagctgtacgcaaataatgtacggaaattgatggcagtggaggtatatacatttatctttcaaaatcttaaaaatggttttcaccatccacattttctttataatccatttgtatcacctgaaatcttattccattctaactaatattacatttttatttttgttctcaggggaacttgattctttctgatcttgggctagcagagaagcgtgtgtaccatgcggcattgaatggtaataatagtctacctcgtgctttacatcagaaagatgattgaaatgccttgccatcgcgcttctgtatactgatgctgagtgacttgcttgtaatatgagtacaagttcctggtgttgcatgattcctcatgttgagaggagctatgttaatatcctcccagtaaactgtaaaattatttgtccatagtgtggttcagtaatcatgtcagttatacatgattacattcacatgtctgggacacacttcaccatgcaatccatcgatgtgagctttat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0357800, RefSeq:Os05g0357800