Os05g0358200

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0358200| Description = DNA primase, small subunit family protein| Version = NM_001187454.1 GI:297724038 GeneID:9267485| Length = 5232 bp| ...")
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Gene Name

Os05g0358200

Description

DNA primase, small subunit family protein

Version

NM_001187454.1 GI:297724038 GeneID:9267485

Length

5232 bp

Definition

Oryza sativa Japonica Group Os05g0358200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:16984314..16989545

Sequence Coding Region

16984836..16984898,16985114..16985193,16985290..16985338,16985448..16985534

Expression

GEO Profiles:Os05g0358200

Genome Context

<gbrowseImage1> name=NC_008398:16984314..16989545 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:16984314..16989545 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatctttccctaggccgtgtttgtgttccaatcgatccaaataactgtgatgattttgatcctacgacagttccaactctgtcacagcttttgggtgagctcaatgcagctggtcttcgtactgattctgaaaacgattgggaaagaacatctcttgaaaaatctatcaggtttttcagggcatcgtttctgcaaccattgctgaaagcctgcaaggaggaattagaaagctcatacaatgccaagctccagcagtccaagaataccttgacttggtaa</cdnaseq>

Protein Sequence

<aaseq>NLSLGRVCVPIDPNNCDDFDPTTVPTLSQLLGELNAAGLRTDSE NDWERTSLEKSIRFFRASFLQPLLKACKEELESSYNAKLQQSKNTLTW</aaseq>

Gene Sequence

<dnaseqindica>4648..4710#4353..4432#4208..4256#4012..4098#accggccaccgcccgcaagcaccgacgcgacgcggcctcggcggcctctccatcaccggcggccaccgcgccacagcaagggtgaaattgtaaaggaggtaggaaattatccttctgagatgattccccttttccccttttctcgatctcgagtccccaaactgttcccctttgctgttcatttcgatctgaaattgagagcagattttagtaacctctcgctccccagcgccgtgcgcgccgccgaccctgctcccccagccacccgcgttgccccccgcctcccggcgcgcacgacgacgacgggtggtttcccttcggcgaggccgctcctcctacctccgacgagcccctcctccctccggcggccacgacgcgagagctgagcggcgacgacgcaagagcggagtgggcgacgcgggcgagcccccttccttccctcttcggccaggctatcattttcttcccaccacccccaccgtgccgccgccccggccgacctcctccccttcgcctcgctttgcccccgccacaatcaccggcccaccgcccgcggccgccgccacccaccgcaggtccgccgcctcccaggccctccctctaaacccgatccccccaacttccccctccccagcgccaccttcccccaccccaccccgaaacccaaccactaaccctagttgtcgtgacgcggtcggaaaacgcgcgcgacttctctccctacctggccatcgccaccccggcgcggcactgcccttctgtgtgctagtaccttgatctgattgtgtgctgaatcttctctctctctttctctctctgttcaatgctctatgctctatctttctctctttctacttctcctttttttattattttcttcgagcgaaaatatttttaagttctttgctagcagttctggtttattagatgaagcacaaaggataacgagtagctcttcagtactccagtttgttttttcaattccggtgatgcattttgtcctacgtttgcctttgaaagtgtgtaacgaatggtcatcagttgcagcctaaaatacgctgtaatttcatttcctctatgtttcacatcgacgttcttcaaaccaagcaccatctttatctcatcgtactcttttttgttttctgttttaccagtttttttttacagttcttgatctgaaacggagacaatggcgagagaggatgagaaggctgacgcaatggagattgatgggcagcatcagcaagtggccaacaccgccgtaccagatggcttcaatgctgattacctcaggatctactatggtacagtagtgcttccctttttcttctaatccgccactgaaatttaagaaactaggcaccagacagtgtgctctttttgctgattattttctctttgtcttggataatccgcagaaagctgcgatcttgaagcaaaatatttttctagaacacactggagcaaaatattttggcatatatatacactgtaatagtggttgtaggtaatctatatgctttctccatggaaaaatgtcgcaacttcttgcaactgcagtccagaataatagttattggtctgtgcagttcaaatggttttaactaaaagatgcttaatttaatatcacagttgatctgccatataatttccacttaaacaattgtgatggccaactgccagtgctaatggttttgtatgtatgctacaattgcaggaaagctcttccctcatgttgatttcttcaagtggctttcatatggaaatggtctgttgttgttggttcaggatctagttgtttactaattgtttcatctatataatacgaatttgtccttttttagacgggaaacatccaggatgtgatcagtcgtatgttggacgtcgagagttctcatttacactagagaatgacatctacgttcgtttccagtcctttgatagcgtggctgaaatggagaactctatcaaggaaaagtgccctttcaagattgatattggacctgtatatagtgtagatgtatgttgtgtaatcacttaacttggacattattttttttatgtgagtttgattttccgcattaagctctgttttttcaatatcttgatgaaaactgtttattttgtagcctgcaaagcggcatgcctatgctcaatcaggcaacaacgtctttgtgccagttgagagagaacttattttcgatatagtaagaaacctgcaaaatttctcctgtggattttatttgtatttttcatcaagcatctgttccaagctgtgaggcatttcaacatcacaggatatatcagattacgatgatgttcgctattgctgctctggagctgatgtctgcatggagtgctggcctttaatgaccattgctatcaaaatcttggatgcttcacttagaggcatgttgttttgcaatgcaattaattaaacacacatgcaaacactcgcttttatttcagtttaattgacttgaattgcagatctttagtcaactattttcttggttagtttgacttgtaacaattgaaagtatgtgtttacagatgattttggtttcaatcacatattgtgggtatatagtggtcgtcgtggtgtccattgctgggtttgtgatagtagagcaagaaagtatgcatgatgtttttccctttttcatttctccatttagtttggtgatcctaaaatgctctggtactttcctgttaggctcaacaacgaacaaagggctgcaattgctgattattttcgcgtctacaaggtggtattcctttattcatgatcctagatgtcgttttgttgctgaaatcttcctgtatggatcttttgcagggtggtgaaaatacgatgaagaaagtttcattgactggagctgttctccatcctttccttgcgtatgtctgaatgatctcagttccttgtttttcaatcataagttgaaattgtatatgttttatcagtacaaattgaaatatagccaaataggctgtaatgaaactctattttcctacagacggtcatacactgatgttctgaaaggcttctttgaagataagctactacttagccaacaactatttgcatctgaggagagatatcagaaaatacttgatcttatccctgatgaaagtaagaatgcaaaccttaactagaacaatatattttagtatcatcactgctatcaaaccatttctcatttgtcaagtcttgaatgtcttcaatcattgtaaagtgtgtgtcatttctagatgttgctagtgagctccatgataagtggcaaggaaacagacgatcttctatttcaaaggaagatgtaaatgctaccaggtgggagcaactaaagtcaaccttgcagtcaggaaaacacaaggtccatgcataatctctcgcaatcctacttaattttatttgcacatttactggtgtatcagttttaatcatatcgagtattgtattctcgaggtttcatcacaatgttacatgtgggattggttgctaattttcattctattttgttgaatgcacaatgatgttttttttttcatgtttcttccacaggggcttcgaagatgtatagaagagattgtcttctcatacacatatcctagacttgatatggaggtaaaagcaaaacgatcaacagcacatgtttgcagcaagtcataaattcattttctgattcctattcgacattctggtgcatatcaggtttctaagcacatgaatcatttgctgaaagcacccttttgcatacacccgaagacaggttagacccaagtatatttcctattttttcatctaatgaatgaagatacttgtttgcactagaaactgtttttgttggctgtccgtgtgtatacacttcgtgtatccgttggaaatctctaatgcaaatgttccttgagtgacacatttttcacatttatatgcattcatttcatgcttacacttatacgtaaaatatgttctgcctaatgagttctaagttctaacaattgttttgaaatctttccctaggccgtgtttgtgttccaatcgatccaaataactgtgatgattttgatcctacgacagttccaactctgtcacaggtgtgtccttagagccaagcattaaaaaaaacaatattctgagatctaatttacctttggaagcatcattatgctaaactgacttgttgaaactgttgaacttaaccagcttttgggtgagctcaatgcagctggtcttcgtactgattctgaaaacggcaagtgataaattcttcacttttaggaatcctgtgtttaactatttcatcctaaaactttcagtgatcttttgataatcctttaatggactacagattgggaaagaacatctcttgaaaaatctatcaggtttttcagggcatcgtttctgcaaccattgctgaaagcctgcaaggtatgcagtatttccttctacatttctatggcaggaaactggatatgcttgtttagttcccagtcaatctcttccatatcttaaactgaatggatcgggccctatactcgtatctactctcgctacagcgctttgcttgcaagaaatcgtctgtgttcttctggttccatagttttccagggtcaagtctcagtttctgccttgtaatgttgcaggaggaattagaaagctcatacaatgccaagctccagcagtccaagaataccttgacttggtaaaattcactcaacttccagctgatcttaccaacctagtgccccatgaaaagcttcttctccatgagacgaaccactgaacccggcattggctgtgttaactggttaaccacaacgctctatgaatgaggagcaaaatactctccgatgctgctgtcatgttagctttgctccaaggaagttgcaattgtagaatatccagtgaccgtcttagaggcagcttggtgctggcttgaaccttttgatctttcatgttgctgacttgatgttattaggataaattcctttaattgttgtgaaatgaattttataggattcctataagtcgctgaaaagaatgattgttaaatgcttcataccaagctagtagccgctataagatctagactagaattagtaaaattaaccatcaagattgcttagagcaatgctcggtttgtggttgatgactgttgagaatttctgtaagatgctgtaaaaataaaagtttcatcgtagtttattttacatatagaatttaatatg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0358200, RefSeq:Os05g0358200