Os05g0359000

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0359000| Description = Conserved hypothetical protein| Version = NM_001187455.1 GI:297724040 GeneID:9271054| Length = 3394 bp| Definition ...")
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Gene Name

Os05g0359000

Description

Conserved hypothetical protein

Version

NM_001187455.1 GI:297724040 GeneID:9271054

Length

3394 bp

Definition

Oryza sativa Japonica Group Os05g0359000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17058205..17061598

Sequence Coding Region

17058205..17059737,17061323..17061598

Expression

GEO Profiles:Os05g0359000

Genome Context

<gbrowseImage1> name=NC_008398:17058205..17061598 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17058205..17061598 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgcaccaccgcgccctcctcgaaggccgccacgttccttcccctctcggcctcggccccgacctcgccgcctccacgccgccggcttcgtccccctcgaagcccgccgcgccgtgtcgacgacgtcgatcccctccccaaccaccgcgacgacgcttcgctctcctcctccgccgccggcggcggcggaatgcgcgttgccgcgtcctcctcgaaggccagcgcgaccaccaccaccttgcccaccggctctggccctccgcggcgcctccaggcggtgtctagagatgaacaagattcattgccaacatcatcacctcaaccagatgtacgagattcgcagccagcattatcacctcaaccagatgaaccgaggccagagaagcgaaagcgaggtggccgaggtcgaaataaaatgcccaagggtcgatacaccatcactcatgtcactgacgatggtcagcctatgttgcctaagactgcagtgtcagcattccggagagcatgcagtgtaattggaaggtcaaagatcaaaataacctacaaggactggaaaaaagtaccaaacactgagaaaacggtactatgggagactatgaaaggaatgtttgagatccctgaaagtgcccatgacagtgtgcaaagacaagcattgcttaagattggcaaggtatggaagaacttcaagagtgagctttacaagaaatacgtgaagcaagatcggacacccttccatgacaaggaactcgcacacttgcgggatcaatggaatgagtttgtacagagatgccagacgccagaatttctgcatcagagtgaggtaaacaaggctctctcggcatgcaatactcatcctcacagactgggcactggtggctatgtgggcaaatcctttcaatgggcaagggaggatgaggaagcagctcagctgagtcggcccactccatttgcagacatcccagtacagcgggctcggaattgggtacgggcaagggcaatcaccacttctgatggcagcatctcctttgcaaataccgagactgagcaggttgctcaaagggtccaacaacttgccgaagaatctcttcaagggtcttttcagtcatgtagagaaaaggacatactaactgaggccctaggaaccaaagaacacccaggtcgcacacgaggcctcggagctacagttccatggaaggcgggattcactgacaattctgatttgtacaagaaacacaggagaagcaaaggcgagtgtgaagaaaccaacgtagcacagctcaaaaaggagatatatgatgaattagcagcaaaaatagatagtgaagttgaagagagattacagcaggcccttaatcagaggtcggtagcctcccccgtggaacccagccccaacacaattcaggactcggtagtctcccccgtccccgtcgaacccagccccaatacgaatcagggtaactgtggggctgttgcacattctcaccctggtggcagcattatccatgataggtatcctgttgatgacatcgaggaacatacaaagtgcaagatccaggtggctatcggtgtaggcactaatttcatcattgatgctggtgagggtactgcatatccatgcagtgaagatccatgggttcaaggtgtgccgctagcagagggttatggaaaggtgcgagtgaacatggtatatccaaatttcactgcattcccattgcctctacccccaaacgaagagatcatgacactagggcaggccctccgcaaatgtatccagtggccaaagaaggacatcactttatcaacctaa</cdnaseq>

Protein Sequence

<aaseq>MRTTAPSSKAATFLPLSASAPTSPPPRRRLRPPRSPPRRVDDVD PLPNHRDDASLSSSAAGGGGMRVAASSSKASATTTTLPTGSGPPRRLQAVSRDEQDSL PTSSPQPDVRDSQPALSPQPDEPRPEKRKRGGRGRNKMPKGRYTITHVTDDGQPMLPK TAVSAFRRACSVIGRSKIKITYKDWKKVPNTEKTVLWETMKGMFEIPESAHDSVQRQA LLKIGKVWKNFKSELYKKYVKQDRTPFHDKELAHLRDQWNEFVQRCQTPEFLHQSEVN KALSACNTHPHRLGTGGYVGKSFQWAREDEEAAQLSRPTPFADIPVQRARNWVRARAI TTSDGSISFANTETEQVAQRVQQLAEESLQGSFQSCREKDILTEALGTKEHPGRTRGL GATVPWKAGFTDNSDLYKKHRRSKGECEETNVAQLKKEIYDELAAKIDSEVEERLQQA LNQRSVASPVEPSPNTIQDSVVSPVPVEPSPNTNQGNCGAVAHSHPGGSIIHDRYPVD DIEEHTKCKIQVAIGVGTNFIIDAGEGTAYPCSEDPWVQGVPLAEGYGKVRVNMVYPN FTAFPLPLPPNEEIMTLGQALRKCIQWPKKDITLST</aaseq>

Gene Sequence

<dnaseqindica>1862..3394#1..276#atgcgcaccaccgcgccctcctcgaaggccgccacgttccttcccctctcggcctcggccccgacctcgccgcctccacgccgccggcttcgtccccctcgaagcccgccgcgccgtgtcgacgacgtcgatcccctccccaaccaccgcgacgacgcttcgctctcctcctccgccgccggcggcggcggaatgcgcgttgccgcgtcctcctcgaaggccagcgcgaccaccaccaccttgcccaccggctctggccctccgcggcgcctccaggttcgccctcctcgaagcccgccgcgccgagtcgatcccctccctgaccaccgcgacgcttcgacctcctccccgcccgccgccgccgccgccgcggcgtcgccaccctgggcagccgcgccgcgccggccccgctggccgcgcggcgtggccctcctcgcgagcgccgccgcgtcttcttcttccccggctgccactgctcctcagcaggtattttcctttttattgatttctgctgctgatttgaatattcgaaaaaaaaggttcgtatcaatggtcgtgagttgtagtgctgatttgatttatccaaaatattatgagcttgaatatctgtaaatgctgttgcttcgatgtggtcctcttcatgtctagtacacaccattgctttgatagagttcgtattttctttttcttcttttttttttttgcggggagctcctatttttattgatttgcagaccaaccgtttatgcaaatggggcaatattggtaccaggctactagctccatgttcatgtctataaagattaaaagattatgcaatgaatgaggagatacaagtttatgccagtagtaagtttgtatgactttttttttctcgaaaaggcgtaagtttgtataacttgactgctgtattagttgcaaaaactgggagcattgtaattcgggcatccttagggcttgttcaattcaattgccatcccattccaaaaggattgttggtatactcgcccttagcagtgcgcatttgctggtttctatggggaagttctggtttagcagtttttatgtttttgcatgtgtcttgctttcttctgaccctgattgtcaatcagcccgtgttgtgtgtatgaatgtgttcatgacttcattctgttattgatcgctattagaccttctatccaatattggactttgctttaacatgatttgtggatgccaatgtactggtattatttctgtaaatttcccataaattttcttctaactacttgatggttggtttgttagagcatgcattttcttgtaacattatttttttcttgtaatatttaattatacaaggtttgggttttttaagtactttaagcatgtccctggccatacaaatctctgctatgcggacctgtttctaagctagatgaaggtattactcttgtagaagcaaactacatgtaggctctgttcgtttgccagggttgggaacccatccttccggcacagaaaacagaacagtctattagtgcgtgattaattaattatttgctatttttttttcaaaaatggatcaatatgattttttaagcaactttcttatataaactttttgcaaaaaaacacaccgtttagcaatttgaaaagcgtgtgtgcggaaaacgaggatggggagttgggaaccttgacatacgaacattgccgtagtcatgtagagtttcagatttcataagaatggtttcttttctcaacaacattagcaactagctaaaaagataattgccatatacagttgcttttattgtgcacatcgatctgttcctagcaccaaaatttgagttaatttgatgtccctttattttttgcaaaggcggtgtctagagatgaacaagattcattgccaacatcatcacctcaaccagatgtacgagattcgcagccagcattatcacctcaaccagatgaaccgaggccagagaagcgaaagcgaggtggccgaggtcgaaataaaatgcccaagggtcgatacaccatcactcatgtcactgacgatggtcagcctatgttgcctaagactgcagtgtcagcattccggagagcatgcagtgtaattggaaggtcaaagatcaaaataacctacaaggactggaaaaaagtaccaaacactgagaaaacggtactatgggagactatgaaaggaatgtttgagatccctgaaagtgcccatgacagtgtgcaaagacaagcattgcttaagattggcaaggtatggaagaacttcaagagtgagctttacaagaaatacgtgaagcaagatcggacacccttccatgacaaggaactcgcacacttgcgggatcaatggaatgagtttgtacagagatgccagacgccagaatttctgcatcagagtgaggtaaacaaggctctctcggcatgcaatactcatcctcacagactgggcactggtggctatgtgggcaaatcctttcaatgggcaagggaggatgaggaagcagctcagctgagtcggcccactccatttgcagacatcccagtacagcgggctcggaattgggtacgggcaagggcaatcaccacttctgatggcagcatctcctttgcaaataccgagactgagcaggttgctcaaagggtccaacaacttgccgaagaatctcttcaagggtcttttcagtcatgtagagaaaaggacatactaactgaggccctaggaaccaaagaacacccaggtcgcacacgaggcctcggagctacagttccatggaaggcgggattcactgacaattctgatttgtacaagaaacacaggagaagcaaaggcgagtgtgaagaaaccaacgtagcacagctcaaaaaggagatatatgatgaattagcagcaaaaatagatagtgaagttgaagagagattacagcaggcccttaatcagaggtcggtagcctcccccgtggaacccagccccaacacaattcaggactcggtagtctcccccgtccccgtcgaacccagccccaatacgaatcagggtaactgtggggctgttgcacattctcaccctggtggcagcattatccatgataggtatcctgttgatgacatcgaggaacatacaaagtgcaagatccaggtggctatcggtgtaggcactaatttcatcattgatgctggtgagggtactgcatatccatgcagtgaagatccatgggttcaaggtgtgccgctagcagagggttatggaaaggtgcgagtgaacatggtatatccaaatttcactgcattcccattgcctctacccccaaacgaagagatcatgacactagggcaggccctccgcaaatgtatccagtggccaaagaaggacatcactttatcaacctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0359000, RefSeq:Os05g0359000