Os05g0360400

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Revision as of 10:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0360400| Description = Zinc finger, RING-type domain containing protein| Version = NM_001061842.1 GI:115463414 GeneID:4338535| Length = 127...")
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Gene Name

Os05g0360400

Description

Zinc finger, RING-type domain containing protein

Version

NM_001061842.1 GI:115463414 GeneID:4338535

Length

1273 bp

Definition

Oryza sativa Japonica Group Os05g0360400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17182514..17183786

Sequence Coding Region

17182727..17183329

Expression

GEO Profiles:Os05g0360400

Genome Context

<gbrowseImage1> name=NC_008398:17182514..17183786 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17182514..17183786 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacgccgacggtgcagatggtggcgccggcggcggcggtggtggaggacccgagcaagcactggacgcggcacgggccggtgctgacggcgtgcctcgtcgggatcaacctgctcatggtcctcctcgtgttcttctacttctggcggttcttctccgggaagcgtggcccgccgacgtcgtcaacgtcaacgatggccagcggcggcgacgacgacgaggaggagggggcgtcgtcgtcgtcgtcgtcggccgacacgtcgccagggcgccaccaccaggatcgggaggacatcgcgtcgtccctgcccgtgttcgtgtactcctcctccgccgccgcccccgacgtcggcgacgccggggggaacgggaaggcggcggcggcggcggagtgcgcggtgtgcatcgtggagttccgcgacggcgaccgggcgcgcctcctcccccggtgcggccaccggttccacgccgactgcatcggcgcgtggctccagctccactccacctgcccgctctgccgcgccgccgtgctgctccaccccgccgccgccgagccggccaagaacgatcagcccaaggatgacgactgcccggtgtga</cdnaseq>

Protein Sequence

<aaseq>MSTPTVQMVAPAAAVVEDPSKHWTRHGPVLTACLVGINLLMVLL VFFYFWRFFSGKRGPPTSSTSTMASGGDDDEEEGASSSSSSADTSPGRHHQDREDIAS SLPVFVYSSSAAAPDVGDAGGNGKAAAAAECAVCIVEFRDGDRARLLPRCGHRFHADC IGAWLQLHSTCPLCRAAVLLHPAAAEPAKNDQPKDDDCPV</aaseq>

Gene Sequence

<dnaseqindica>214..816#acaccacctttctctccttccctcttgtgctcctccttatcttctatctcttcttcttcccctatcttttcttctaaagaacatctgcaatctccagcttcttctgttctgaagcagtggctttttgtggtttatgcacaccattggcagctgctactgtttgctgcttgtgttgtcagaagctaccttattgtttcggtcatcatcggcgccatgtcgacgccgacggtgcagatggtggcgccggcggcggcggtggtggaggacccgagcaagcactggacgcggcacgggccggtgctgacggcgtgcctcgtcgggatcaacctgctcatggtcctcctcgtgttcttctacttctggcggttcttctccgggaagcgtggcccgccgacgtcgtcaacgtcaacgatggccagcggcggcgacgacgacgaggaggagggggcgtcgtcgtcgtcgtcgtcggccgacacgtcgccagggcgccaccaccaggatcgggaggacatcgcgtcgtccctgcccgtgttcgtgtactcctcctccgccgccgcccccgacgtcggcgacgccggggggaacgggaaggcggcggcggcggcggagtgcgcggtgtgcatcgtggagttccgcgacggcgaccgggcgcgcctcctcccccggtgcggccaccggttccacgccgactgcatcggcgcgtggctccagctccactccacctgcccgctctgccgcgccgccgtgctgctccaccccgccgccgccgagccggccaagaacgatcagcccaaggatgacgactgcccggtgtgacgcctcgccgtcgccgtcgccgggagagacgagaacacagctatagacggagggtcgagcgcgcaatcgatcgtacgccggccggggtgatcgagaacgcgacaagcatctttcggcgtgcatcgctgtccaagatggaggaaatcaagaaaggttggtgtcggtgatgacttatgagttgagaagacgcgaggttttgcttccactcgtacggccgtttttgttttcttcttctctccagcttgttctttaatttgttgttacctaccctagctgcttatattgtgtgtgattatattgtgtgtcctcatctgtgtgtgtatatgattggagctgtgtgctgctatatagtataagagttttgtgtatagaaatcgatcgatctgctgcatgcatgcatatcggatagaattagtatgtactttgtaataaaggttaattactcgtagttgaatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0360400, RefSeq:Os05g0360400