Os05g0365200

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Revision as of 10:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0365200| Description = Conserved hypothetical protein| Version = NM_001061859.1 GI:115463448 GeneID:4338553| Length = 3853 bp| Definition ...")
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Gene Name

Os05g0365200

Description

Conserved hypothetical protein

Version

NM_001061859.1 GI:115463448 GeneID:4338553

Length

3853 bp

Definition

Oryza sativa Japonica Group Os05g0365200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17513557..17517409

Sequence Coding Region

17514104..17514501,17514691..17515001,17515123..17515185,17515762..17516246,17516837..17517187

Expression

GEO Profiles:Os05g0365200

Genome Context

<gbrowseImage1> name=NC_008398:17513557..17517409 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17513557..17517409 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcggctgcggggatgggtggcaacggcaatggcgcggatgacaaggcacgtgatgtcacggatcagtccaaggctcttggtgggaacagctgcgaggaccgcgcgctcccctctgctgtgcgtgtcactgtcagtggtgatccggtggggacgtttggctcttttgggaacatggccgattataatgttcaccttcatcagcctgatgaaggtgacgaccatggtgacagcacggagtgctcgagctcgttcgggccctcttgctccgcgtcgtccgatgatgatgacgacgacacgaagtcggagatggatggcatggaggtggattcgccgtttcttggtccaacccgtaccggtgcggatcgcgctagctctgcaccaaggatggtcagacggagacaggtgacagccgagtggagaaagattgttgggccaataatgtggcgatgccaatggttggagttgcatatgaagaatctcttatcacaggtagcaaagtatgacagggaacttgctattatcaatcatgaaaaagatctgcagttggagatggttaaagcagatggtcctaaatcagaaccgggaaaactatatccccaaagtcatgagagaattatcatgaagagaagaaaaaggaaaagagatgaagacactgtagatacctcattgtacttgaagaggcaccccgcactgtcttattatgaaaacaaaaacagtggagttcaaacggatggtcccttggttaatggtggttttgacagttcagttgttgaggacatcgaaagcactgatgatgcgttagttgagaatgacagggtatttgaacaatattctttaagagagattcttcttacagttgatgatgtccagtcccgaattcttagtcttcagggtcgcctcagcaatgctcgcagcaaatacaagaagttgtcacaatgcttagaccgtaaacaggttaaggtgcctcaaaagattcagaatcagatgacctgttgtaagaaggatggaagacgttctcatcagaaaacaaagtgtatgcatactttgcttcagaaggatgacttagatagatcacttgctgtggttccacctgtatttggtaggtccactgactgtgtgttggaatgtatgaagaaaaatgatgcacaagaagatgcagtacaatcagatctaaatggaatcacaattgagatgttctgtggtaaagataatttcctaaccaatgcccatgtaggggagttatacaaagaaagcgctgatgatgtcctcatagataatcaagcagccaaagaaggttatcagctatttgagaaggtcaagccagaggagcattcagagctggttatgcctccttccaaagtacaaaaagcaagtgcagacatagtggactatgaacaagttcaagaaacagctccagttgccaagcaaatcatctctggagacaagcgtggacagaaaccaaataagaaacatgggcttcctgtgcttgcgaagaaaattaaaactgagaaagatcccggcaatatgaagaatgaaaagactgttttggtggctgtggatccccggaggagtacacgagttcgaaaacccaaaacttattga</cdnaseq>

Protein Sequence

<aaseq>MAAAAGMGGNGNGADDKARDVTDQSKALGGNSCEDRALPSAVRV TVSGDPVGTFGSFGNMADYNVHLHQPDEGDDHGDSTECSSSFGPSCSASSDDDDDDTK SEMDGMEVDSPFLGPTRTGADRASSAPRMVRRRQVTAEWRKIVGPIMWRCQWLELHMK NLLSQVAKYDRELAIINHEKDLQLEMVKADGPKSEPGKLYPQSHERIIMKRRKRKRDE DTVDTSLYLKRHPALSYYENKNSGVQTDGPLVNGGFDSSVVEDIESTDDALVENDRVF EQYSLREILLTVDDVQSRILSLQGRLSNARSKYKKLSQCLDRKQVKVPQKIQNQMTCC KKDGRRSHQKTKCMHTLLQKDDLDRSLAVVPPVFGRSTDCVLECMKKNDAQEDAVQSD LNGITIEMFCGKDNFLTNAHVGELYKESADDVLIDNQAAKEGYQLFEKVKPEEHSELV MPPSKVQKASADIVDYEQVQETAPVAKQIISGDKRGQKPNKKHGLPVLAKKIKTEKDP GNMKNEKTVLVAVDPRRSTRVRKPKTY</aaseq>

Gene Sequence

<dnaseqindica>548..945#1135..1445#1567..1629#2206..2690#3281..3631#atctccaaactctctctgttgttcccatctgccggaggccggagtgagggagcagccggcgaggagggaggccggcgttggccatcggcgtggacgacctcgcccaagacgacgccgacgccgccgccgacgacgacgactttcccgtgtgcggattggccaaggcggtggggttggagggaggggaggggaggggggtgacgcgcgcggccggtgcggtgcggtgcggcgcggtgctccccccgccatctccggtcggatcggatcgaaggtacgcctcattctcttcctccgttccgcttggatgatccgccgcgtggcgtagattggggggcaagggattaatcggtcggtctgtttatttttccctcggattaatcggtccaactttttcttgttactgatttatttgatgcgttgtttgtgtggtactaatggaggattgtgtttgtgaatgaaattttgtgatctagctttgtgttgattagacttggaggaggaggaggaggagaggggggaggttttgggtttttctccttccctggcaatggcagcggctgcggggatgggtggcaacggcaatggcgcggatgacaaggcacgtgatgtcacggatcagtccaaggctcttggtgggaacagctgcgaggaccgcgcgctcccctctgctgtgcgtgtcactgtcagtggtgatccggtggggacgtttggctcttttgggaacatggccgattataatgttcaccttcatcagcctgatgaaggtgacgaccatggtgacagcacggagtgctcgagctcgttcgggccctcttgctccgcgtcgtccgatgatgatgacgacgacacgaagtcggagatggatggcatggaggtggattcgccgtttcttggtccaacccgtaccggtgcggatcgcgctagctctgcaccaaggatggtcaggtgagcatcatctcttcatgaggtccttgcagaccgttgattcttgaaatcgtattgacgtggttagcatggtgttgtagtgttgttcgaacggaattaaaagagaacatttacatcttgtgttccttttcgcttttgataaatgctatgtgtgtgtcgtagcttgtaatcagattaattttgtttcagacggagacaggtgacagccgagtggagaaagattgttgggccaataatgtggcgatgccaatggttggagttgcatatgaagaatctcttatcacaggtagcaaagtatgacagggaacttgctattatcaatcatgaaaaagatctgcagttggagatggttaaagcagatggtcctaaatcagaaccgggaaaactatatccccaaagtcatgagagaattatcatgaagagaagaaaaaggaaaagagatgaagacactgtagatacctcattgtacttgaagaggcaccccgcactgtcttattatggttcgacatcctgtccttgttttatagggctagagaaaattgttgtcttgaatgagtatcatattttgcatggggttcgtgtttatacttgactgtaacgaagactcttgatcttttgcagaaaacaaaaacagtggagttcaaacggatggtcccttggttaatggtggttttgacagttcaggtaagttacatggttgtgcctgtgtgctcaagattattttctgtagtttagaaggagaaaatataatttttgttgcagtcactcttcaatctgaaatgcaagtggttgttagagcattaacgtacgtgcttttgcccctttttttttgtcagtggtcagattatcgcactgtgcattgttttggggtctgaattcagtatgcctgtactgttaaaatttcagtttttctaaagcacacgtttagcctgttcctcgggatgctagagttgcaggcttgcgtgcaagctgcatacctgcaaaaattggttgggtaaaattgtttctgtatacagtatctatcggagcagccatcgaacttgatatcagactgagtttctgtcacatttagtttgtttatctcttttagtttatcttttatggtacttttctatcttttggggattgattgtgcacgatgttatattaatgaagctgaaaggcaggaaatgtgtatttttgaactcttttatatattttaatgtggaattgttcctcttaatagttgctaatcctctctatttgtcgctcttcacgcagttgttgaggacatcgaaagcactgatgatgcgttagttgagaatgacagggtatttgaacaatattctttaagagagattcttcttacagttgatgatgtccagtcccgaattcttagtcttcagggtcgcctcagcaatgctcgcagcaaatacaagaagttgtcacaatgcttagaccgtaaacaggttaaggtgcctcaaaagattcagaatcagatgacctgttgtaagaaggatggaagacgttctcatcagaaaacaaagtgtatgcatactttgcttcagaaggatgacttagatagatcacttgctgtggttccacctgtatttggtaggtccactgactgtgtgttggaatgtatgaagaaaaatgatgcacaagaagatgcagtacaatcagatctaaatggaatcacaattgagatgttctgtggtaaagataatttcctaaccaatgcccatgtaggggagttatacaaagaagtaagtttagctatagcatcttattcttctctattttgtcacacgatattttagaactaatgtatgaagaacactttgaccagtagctggttcctaataaaaaggaacataggatataccaactctttgcccatccaataaaccatgtagatctccgtcatgtcatgttaggatttctagttgcatgtgtgtgggtgtgggacctctagtccttcataatcttctagaagtcaactataaatattttatgtcgaagtatatggtgaaaaacaagctgagcatgatggtgttttcttgaatatgcagtagatctgtgtaacgtcatggtgtttcctgctttgcgatatacagtcacaaggcgatagtgtgatatgcgatatacatgtgcttgataccatcatttgtaatgatttgctgatctttcatagatctgacattgcctcgtaatcataatgattcctatttttatactgaattatttatcaaagctaaatagtgtactccctaaactgttgtaagaaatagggactcgtgctggatcaacatatttgcaaaaaccttttcatttgatggtttggttatctttgcagagcgctgatgatgtcctcatagataatcaagcagccaaagaaggttatcagctatttgagaaggtcaagccagaggagcattcagagctggttatgcctccttccaaagtacaaaaagcaagtgcagacatagtggactatgaacaagttcaagaaacagctccagttgccaagcaaatcatctctggagacaagcgtggacagaaaccaaataagaaacatgggcttcctgtgcttgcgaagaaaattaaaactgagaaagatcccggcaatatgaagaatgaaaagactgttttggtggctgtggatccccggaggagtacacgagttcgaaaacccaaaacttattgaagctattggtttccagccgtcctggtatctggttgctacttaaccagtggatttttgtcgtgctgtccgaatatgtagctacattgagccagatgttatatagtttgttatgtaagtaatcatagcaataggaaggtgaaatgtgaagtggcatgtctcgctcagggatcaagaaccctttatttcttattggaggttacagatagcagcaatagttgcctt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0365200, RefSeq:Os05g0365200