Os05g0366600

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Revision as of 10:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0366600| Description = Similar to Hydroxyisourate hydrolase| Version = NM_001061866.1 GI:115463462 GeneID:4338560| Length = 5529 bp| Defin...")
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Gene Name

Os05g0366600

Description

Similar to Hydroxyisourate hydrolase

Version

NM_001061866.1 GI:115463462 GeneID:4338560

Length

5529 bp

Definition

Oryza sativa Japonica Group Os05g0366600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17601793..17607321

Sequence Coding Region

17602064..17602246,17602418..17602481,17602707..17602765,17603396..17603471,17603591..17603662
,17604589..17604676,17604776..17605031,17605373..17605488,17605634..17605854
,17606042..17606070,17606232..17606333,17606644..17606739,17606841..17607080

Expression

GEO Profiles:Os05g0366600

Genome Context

<gbrowseImage1> name=NC_008398:17601793..17607321 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17601793..17607321 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtctcctcttctacctctacctgctccagcttctctctcctcctcctcctcctgctcctcgccgcggcgccatggcggtcaggcgaggcggcggcggcggcggcgagagctctcaacttcacaaggcaggatttccccggggagttcgtcttcggcgccggcacgtcggcataccagtatgagggggctaccgatgaagatggaaggagcccaagcatctgggacactttcactcatgcagggaagatgccggacaagagcaccggcgacatgggcgccggcggctaccacaaatacaaggaggacgtcaagttaatgagtgatactagcctggaggcataccggttctccatttcttggtctaggcttattccaagaggaagaggacccgtcaatccgaagggactcgagtactacaatagcctgatagatgagctagtcgaacgggggattgagatacatgtgactctctaccacctggatttccctcaaattcttgaagatgagtaccatggctggctcagcccaagggtcattgacgatttcacggcgtacgcggacgtgtgcttcagggagttcggcgaccgggtgaggcactggaccaccatggacgagcccaacgtgctgtccatcgccgcctacgacagcggtgccttcccgccgtgccgctgctcgccgccgttcggggccaactgcaccgccggcaactccaccgtggagccgtacgtcgtcgcccacaactccatcttggctcatgcctcggttactaggctgtacagggacaagtaccaggctacacaggagggattcgttggcatgaacatctacagcttctggaactaccctttctcctccagctctgcagacatagcagcaactcagagagccttggatttcatggtcggttggatactggaccccttggtttatggggactaccctgaaatcatgaagaagaaggctggttccaggattccatccttcaccgaagaacaatctgagctgatccgtgggagtgctgatttcattggaataaatcattacacgtcggtgtacatcagcgatgcatcgaatggcgaaacggtgggccctcgagactacagtgctgatatggcagcaaccttcagaatttcgaggaacgatacgccgagtggtcagtttgtccctactaggctcccaagagatccgaaggggctgcaatgtatgctcgaatacctcagagacacataccagggcattcctgtttatattcaagaaaatggtttcgggcatttcggtaaggacgacgattcactcaatgacacagatagagtggactacttgagtagctacatgggaagcactctagctgcactaaggaatggagccaatgtgaagggttactttgtgtggtcatttcttgatgtgtttgagctgttagcaggataccattcgccattcggcctgcattatgttgattttgaggaccccaatttgccaaggcagccgaagctctctgctcactggtactccaagttcttgaggggtgaaattgggataaacatcgaaagcacgattagtcccgatgaacatgaacatgaacatgctgatcaatga</cdnaseq>

Protein Sequence

<aaseq>MAVSSSTSTCSSFSLLLLLLLLAAAPWRSGEAAAAAARALNFTR QDFPGEFVFGAGTSAYQYEGATDEDGRSPSIWDTFTHAGKMPDKSTGDMGAGGYHKYK EDVKLMSDTSLEAYRFSISWSRLIPRGRGPVNPKGLEYYNSLIDELVERGIEIHVTLY HLDFPQILEDEYHGWLSPRVIDDFTAYADVCFREFGDRVRHWTTMDEPNVLSIAAYDS GAFPPCRCSPPFGANCTAGNSTVEPYVVAHNSILAHASVTRLYRDKYQATQEGFVGMN IYSFWNYPFSSSSADIAATQRALDFMVGWILDPLVYGDYPEIMKKKAGSRIPSFTEEQ SELIRGSADFIGINHYTSVYISDASNGETVGPRDYSADMAATFRISRNDTPSGQFVPT RLPRDPKGLQCMLEYLRDTYQGIPVYIQENGFGHFGKDDDSLNDTDRVDYLSSYMGST LAALRNGANVKGYFVWSFLDVFELLAGYHSPFGLHYVDFEDPNLPRQPKLSAHWYSKF LRGEIGINIESTISPDEHEHEHADQ</aaseq>

Gene Sequence

<dnaseqindica>272..454#626..689#915..973#1604..1679#1799..1870#2797..2884#2984..3239#3581..3696#3842..4062#4250..4278#4440..4541#4852..4947#5049..5288#aatctgaggcttacttaaccttagagagcttatagctatctctgcagctgcaaccaattggcatgtgtgtggcagctctcactagcgagaaataccgaagatatgcttacatactcccttcgtcttattttaaatatagttatggatttttgcatctaacgttttactgttcgttaaactttgggatactatagtacatataattaaactgtactagtagagacaaccagagaaacggaggagaggctctctctctagctactacctcaccatggccgtctcctcttctacctctacctgctccagcttctctctcctcctcctcctcctgctcctcgccgcggcgccatggcggtcaggcgaggcggcggcggcggcggcgagagctctcaacttcacaaggcaggatttccccggggagttcgtcttcggcgccggcacgtcggcataccaggttagctttttaattggaagaaccagctgatgctttgcttattttcacatatatgcatggtctaattactgtgtatatgaatagttagtactagacaagttaaaagaaaaattaaaaccactggtgttaatggtttcttttccttttttttttgggggatttttgttacagtatgagggggctaccgatgaagatggaaggagcccaagcatctgggacactttcactcatgcaggtgatgtataattgtttcattaatcacacatataattccttcacacaatcgtacttagtacttgcaaaatatatagtactacatatacacatgatcaagctagctagctagctagccgactcttagttaagtacacagtttacatgtttattattattagatgattattgttttctgatctgatttatttggctgtgcatgcatgatgggttaattaatttgcagggaagatgccggacaagagcaccggcgacatgggcgccggcggctaccacaaatacaaggtacgaacagttttttttttaggtctttttggatggtcgtaattgttcactataacatatggttggacgatattgtaatgccacgtgttcatttgttcgttcctttgggatttcgttgaattctggcgcctatttaattacctgtccttttccagtttctaagctagcggttttgatcgatgaatcggaaacaacgtgccttttttttctcatcggtcttttttttaaaaaaatataatggctcatatatacgtgattctccttttcttttctagtgcagagtttaatttccagctagttaagtgttgaaattattgttcttgttatcaaagaaaaaagtataatttaattaagtgtagttcaattaatacttctggcaaatgggaatatcaacctaaaaccctaattaggaattaagctaggtggtagtttgaatccaatttcaagttggattagaatgataattaaaaaggtcatgaggatgggaaaagaaaaatcaaatattttaatttctttttttctgcaattttctcagcagatatttcattgttccaacgttccttgaattgtttcttgaatttgtggccggaaaatgatgccaagttaattggaagtatctgcatttttcaggaggacgtcaagttaatgagtgatactagcctggaggcataccggttctccatttcttggtctaggcttattccaagtaagaaaaatgttttactaatcacaattgacttggggaacttaattatcatatccttgcagaacatgtgtccctcataagtcgttctaatcttgatccaatttctatgatcaacacaggaggaagaggacccgtcaatccgaagggactcgagtactacaatagcctgatagatgagctagtcgaacggggtaatttccatcatgatttgtagttttaatctgaaatatgtaggaatttttctccaatttcactcgctgcagttacatcacaataaagaaaaatgagagaggaataatcttttttcccttttactccttaaagtattctcaaagaaatcgtgtttctgatatatatgattgtttctctacatatgtattaacgacaaaaatactaaggagattctttactgaatctaattttccatcattttcaaaagatattctcccttcatttttaaatgtgtgacgttgttaaattttgaaaattgacaagtcgtcttattcaaaaattgagtacaaacataaaaaagtcatgcttaaaacacattaatgataaaacatgttacaaaataaatgatacttacatagcttttctaaatatcaagttaaagtgtcaacagttaaatataaaaatagtatttgctagatttaagccacctaaaatttgtaaattttgagtcacctaattaaaattgcacagcctaaaaattgcaggactatgaaatgtgccatttaagttcattatatccgcagttttgtttatctgtattgtacatttttttccccaattttcatgcttaggctataagaatttattgtttaaccttttatttaaaaagaaggttttttgtttaaataagtaataagaaagtgatgaaaaccattgaattgttaatctgtcatccaagtaaaatgatttcagtcacctgaaatctagacatattttaaaatactacaatcatctgactaattttcgttcgaatttttagaaatttaaatacacctgtaaaaaaattgtgaaaagctaattgtggttgaactggaaatattaacaaatccagcctcaatgcaacattgcaacacaaataatttctgaatttccgattgttctgcagggattgagatacatgtgactctctaccacctggatttccctcaaattcttgaagatgagtaccatggctggctcagcccaagggtcatgtaagacacttgatatctcatcactgctcctcctgaaagaaaccattcttcttcttcaagaagctgccatctgaaattccatctgaaaattttttgcagtgacgatttcacggcgtacgcggacgtgtgcttcagggagttcggcgaccgggtgaggcactggaccaccatggacgagcccaacgtgctgtccatcgccgcctacgacagcggtgccttcccgccgtgccgctgctcgccgccgttcggggccaactgcaccgccggcaactccaccgtggagccgtacgtcgtcgcccacaactccatcttggctcatgcctcggttactaggctgtacagggacaagtaccaggtgagtcagtcaagtacagtaataagttcctattttcgtttgaattcagcaaaaaaaaatgaatggctcaaattcggtgcaaatctgtttcaatttcaatttcttgctttcggagaattctgaatttgcattctgagattgtgaacgctgagtgagtgagccccatcctgaacgcttagctgaactctgttcagattttttttttttcgcgaacgtgcgaaggattctgttcagatttcagaaccgaaatataggtttgatcaatggtcagaaaggcataaatgggccgtacagaattgcagattgatctcttagtcaccaacatgcatggacatttgcaggctacacaggagggattcgttggcatgaacatctacagcttctggaactaccctttctcctccagctctgcagacatagcagcaactcagagagccttggatttcatggtcggttggtgagtgatccttttttccttctccattcctttttcaagatactaaatttgttggttaatcatacaacaattatgcatgcaatgaaattatcaaattagataagatgatgaggagacctatatatgcttattaattcttgcttaggatactggaccccttggtttatggggactaccctgaaatcatgaagaagaaggctggttccaggattccatccttcaccgaagaacaatctgagctgatccgtgggagtgctgatttcattggaataaatcattacacgtcggtgtacatcagcgatgcatcgaatggcgaaacggtgggccctcgagactacagtgctgatatggcagcaaccttcagaagtaagttcagttttgatgtgaagaaatcaagttcatgcaatgtggcaaatcctcagtatcacattgatgatgagactctaaaaacgaaaaatagaagtgttacacatgctagctctaggaagttcgtagtgaatataacacaatttgattaccaattgtaattgcggtttgatttcctgtgtttcagtttcgaggaacgatacgccgagtggtcaggtatcttaaccttttcccctactttcactcaatttgggtattttgtatttgaaatcaaactaaatatcagttattcaatggagaaaaatcccatgaatgtttttttcccttcagcagaggtactaaacattttcatttcaacttttgccttttgggtacagtttgtccctactaggctcccaagagatccgaaggggctgcaatgtatgctcgaatacctcagagacacataccagggcattcctgtttatattcaagaaaatggcaagttttcaaactcaatatctatccatatatagcccaatggtgttcttcattatgtgactatgcgcattacaatatttcaaaagtacatggtgcttgccttgcaaattttgtggaagttctcttgatttgcaaggaaaatttatgcatagtttttttttaaagaatgtaaattctgtgggagctgaaacagtgagtctttcacctattcttttaaaaaaataaatttctatgtgtcatgtaaaactgtaatgtcattgacgtctttaccgatctatttttttttgttcatctatttaccatattttaggtttcgggcatttcggtaaggacgacgattcactcaatgacacagatagagtggactacttgagtagctacatgggaagcactctagctgcactaaggcaagtgctgttcctttcggttacatgataaatattggtgactttgtctgaacttttaacaagaaaaatggattttttttttgttcatatggtcattgcaggaatggagccaatgtgaagggttactttgtgtggtcatttcttgatgtgtttgagctgttagcaggataccattcgccattcggcctgcattatgttgattttgaggaccccaatttgccaaggcagccgaagctctctgctcactggtactccaagttcttgaggggtgaaattgggataaacatcgaaagcacgattagtcccgatgaacatgaacatgaacatgctgatcaatgagcttatcgggagtgcatgatgttcagctgtaggggatgaagaaaacactatcatagtgttttttactacctttctattcttctttcgtttgtggaacatttctttcataggattcttatataattagtcattactcacagttaggtgtttactgatgagttatattctcctcatttgtagacagtcatgttcttattgtcatggctcattacagctgaatagagaaaatcggaaatttgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0366600, RefSeq:Os05g0366600