Os05g0367200

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Revision as of 10:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0367200| Description = Conserved hypothetical protein| Version = NM_001061871.1 GI:115463472 GeneID:4338565| Length = 3487 bp| Definition ...")
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Gene Name

Os05g0367200

Description

Conserved hypothetical protein

Version

NM_001061871.1 GI:115463472 GeneID:4338565

Length

3487 bp

Definition

Oryza sativa Japonica Group Os05g0367200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:17644625..17648111

Sequence Coding Region

17644840..17645496,17645571..17645810

Expression

GEO Profiles:Os05g0367200

Genome Context

<gbrowseImage1> name=NC_008398:17644625..17648111 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:17644625..17648111 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagtagctgatgtacaggacctgcctgttgaagatttgagggataatgaagtgatcactgtggatagtgaaggccctggcaagcctctccagtcaattccccttgttcaagacaaggatgcaatacaacttgcgagaacttttgtcaatgagaaagtcaaagagctaatggaaggtgtctcagagccaggagtcctgcagagtcgtttgtctaaaatcacctcattccttgttcaggccacctctatagctgccggcctccatgatgaagtccctctacaaatacgtggacaaactgctgctttggtgacccaaatctcagggcttgagcagcaggtggaggagctgtccaagaagctgtgtagcactgaggatgagcttgaggtgaccaatgcaatgttgaaagagacccaggctgccatgctagaggcacaatcagaccgagcgaccgccattactgccatgaacagccttgccatgcgcatgggagcttcattcgctaggctgggcacaatactggaccccccacccaatgcggctgactctctggagaagagcattaagcagatgacagccctcgtgtctctcctcggccctgtgtctcacagccatagcttgagtctagccaggagcagcctgacggttgggattgcggcattgctgtgtcgagaaaggggcattgagggcctgcgcgagccgtcgggtatggatacccgtcagtttgtccgctcgcaggggcctgagttccactccctgatctctcaagttgtcgactccatggagcagcggttggccaagatggttgaaggcagtggatggagagattctggagctaccaaagagccaggaaaaccagcagacagtaacaaaggaacaatgcctgaaccgcattaa</cdnaseq>

Protein Sequence

<aaseq>MAVADVQDLPVEDLRDNEVITVDSEGPGKPLQSIPLVQDKDAIQ LARTFVNEKVKELMEGVSEPGVLQSRLSKITSFLVQATSIAAGLHDEVPLQIRGQTAA LVTQISGLEQQVEELSKKLCSTEDELEVTNAMLKETQAAMLEAQSDRATAITAMNSLA MRMGASFARLGTILDPPPNAADSLEKSIKQMTALVSLLGPVSHSHSLSLARSSLTVGI AALLCRERGIEGLREPSGMDTRQFVRSQGPEFHSLISQVVDSMEQRLAKMVEGSGWRD SGATKEPGKPADSNKGTMPEPH</aaseq>

Gene Sequence

<dnaseqindica>2616..3272#2302..2541#agtgtcctcctccagtcctcctcggcctttccccccgccacaaaaccctagagcgcgaatggggcggcaggtgcgcaagcacgagggctcgcacggcaaggtggacgcgccgccgccgaagaagccgaggagcaccgagcggccattggcaccgctcgccgccgccacgacgaccgccaagccaaggcgtgacgtggtgagacccgcggcgaggaaatcctcggcttcgagcgatcgcggccccgtcgcccccggcagcgacctcgagacggaaggttataggcccctcacgccgtctcccccctttgcttcgatgtatgccgattcctcacttttttttttaatgtatggttgctgtataaagatcgagcggcaacgcttttgatactgtggtgttattggtatgacgtggttaatctggatagacagcaagaaaaggagatttcagattagaaaaaaaaactttgcaaaaaaaaagaaagattaggaaaaaagagagctagtacattataccccctccagtttttaatagatgacgccattgatttcggacacaatcagtcatcttattaaaaaattatttgcaaatgcataacatatagatcatgcttaaagtacttttaatgataaaacaactcacaacaaaataaattatattccatccttttttaatagatgacgttgttttttaacacacatttgaccattcgtcctattcaaaagttttttgcaaatttataagatataaatcatgcttaaagtactttgcgtgataaaacaactcacaacaaaataaattatattctatccttttttaatagatgacgttgttgatttttgaacacatgtttgaccattcgtcttattcaaaagtttgtcaaacgtatgataaaaagtcaacgttgtcatctagtaaaaacggaggtagtaattacgtacttttttttaataaaacgaatggtcaaacgtgtgataaaaagtcaactcatctattaaaaatcagaggtagtaattacgtaaattttttgaataagatgaatggtcaaacatgtgccttaaaatcagcggcgtcatctattaaaaaaaacggaggtagtatgtttcaactactaccaatattttcaaccactagaaaagctagtttttacttctagtcaggtccatggtccatttaacactgtaagtttagaaccaattctatcaggcaaaaaaaaaagacagtaaatttcacattgctcacctttattaaccaaagtttcacaagtcagtaaaggtggctcaaagtgaaatttactaaagcaaagaaatgtccttctcgtcgtctccctgcccccaaaacctagtgcgaatagggcagctggggcacaagcacgagtgctcgcacaacaagttggatgtggggctgctgcccaaaactccaaaggactctgaccgtctggtgcttccacttgcccccgcccccacctctgagctgaggtgtgaaaatgtgagatgtgccgcagggaactcctcttttcgtgtctggtaatcctggcctccatggttcatgcggctgtggccctggcagcgaccttgactctgatggtaaggaccctgagctactgagatcagtactgagaaattgctcgaaatgcctagagatgtatgcagattactgtacagagcccttgcttggaaacctaaactatagtagtggtgaccttttgcttcaacctcaatctacaatgcacatacagattatttgttccagtagctcattattttttattgctatcaatcgggtaactaacatttatagcattttcctgtgctgatatcatttttcttcaaaatttgagtgaaatgagaggataataaatgaggcggatcgattaatcttgctgttagaagctcgggttcaaatatgcttttgtgttgtgtcacttgctaagttgaaaagttgcatctttgttggatggggattaaccttgctgttaccagctcaggtcaaaatatgcctttgtcacttgttgagttgaaaagctgtatctttgtcagatgggcattctttttttgtgaaatgaccttcatgatatgtggagcctgcagattcagatggtcttggctgcttgacccctgacagcacgaaagctacgcttcagcaggatgattatgggaaaggggagtactctccgggtgtggttctatctaagactggtatgtttaggtttgccggttctgttgcttttgtgttaatcatatttagtttccttgctgagttttgaaaattctcctttttatgagggagattctgtggtgaagatggcagtagctgatgtacaggacctgcctgttgaagatttgagggataatgaagtgatcactgtggatagtgaaggccctggcaagcctctccagtcaattccccttgttcaagacaaggatgcaatacaacttgcgagaacttttgtcaatgagaaagtcaaagagctaatggaaggtgtctcagagccaggagtcctgcagagtcgtttgtctaaaatcacctcattccttgttcaggtgatcttcctaagaatccttctggcttgcctatcctaggaagcaagtcacatgcaattatccttcttgtgcaggccacctctatagctgccggcctccatgatgaagtccctctacaaatacgtggacaaactgctgctttggtgacccaaatctcagggcttgagcagcaggtggaggagctgtccaagaagctgtgtagcactgaggatgagcttgaggtgaccaatgcaatgttgaaagagacccaggctgccatgctagaggcacaatcagaccgagcgaccgccattactgccatgaacagccttgccatgcgcatgggagcttcattcgctaggctgggcacaatactggaccccccacccaatgcggctgactctctggagaagagcattaagcagatgacagccctcgtgtctctcctcggccctgtgtctcacagccatagcttgagtctagccaggagcagcctgacggttgggattgcggcattgctgtgtcgagaaaggggcattgagggcctgcgcgagccgtcgggtatggatacccgtcagtttgtccgctcgcaggggcctgagttccactccctgatctctcaagttgtcgactccatggagcagcggttggccaagatggttgaaggcagtggatggagagattctggagctaccaaagagccaggaaaaccagcagacagtaacaaaggaacaatgcctgaaccgcattaagttagggtagtttcttttgatctcatctctagtagtactctgagatgagatgggctgatagtatctgttgtagggtgtagctcagctcactgactgccagtatagtatgtacagagctctggcagtctggtactctggttccgtcaccttgacttatcctatctatgaagtaatgcaacctctaacttgtttacatattacatctcgattctatg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0367200, RefSeq:Os05g0367200