Os05g0386000

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Revision as of 10:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0386000| Description = Conserved hypothetical protein| Version = NM_001061953.1 GI:115463636 GeneID:4338656| Length = 4679 bp| Definition ...")
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Gene Name

Os05g0386000

Description

Conserved hypothetical protein

Version

NM_001061953.1 GI:115463636 GeneID:4338656

Length

4679 bp

Definition

Oryza sativa Japonica Group Os05g0386000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18687578..18692256

Sequence Coding Region

18687932..18688324,18688427..18688494,18688578..18688779,18688976..18689073,18689161..18689230
,18689318..18689389,18689530..18689643,18691691..18691756

Expression

GEO Profiles:Os05g0386000

Genome Context

<gbrowseImage1> name=NC_008398:18687578..18692256 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18687578..18692256 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgggaggaagaatgccggcaaggcctcgccgtttctgctcctcctcatctcggtgggctgcttcttcgcgacctacaacttcctgacgatggtgggccacggccggagccgggacgccgggccgcggaagattctcggcggcgtcggcggcgtcggcggcggcggctcggacccgtcgaagaggttccacgtcgcgctcacggcgacggacgcgctctacagccagtggcagtcgcgggtgatgtactactggtacagggagatgagggatcggcctggctccgacatgggcggcttcacgcggatcctgcactccgggaagcccgacggattgatggatgagatacctaccttggtggttgatcccctccccgaaggcgcggatcgaggttacattgtcctaaacaggccttgggcatttgttcaatggctgaagaaatcaaacatcaaagaagactatgtacttatggctgagccagatcacatctttgtgaggccattgccaaacttagctcatggcgacgaacctgctgcgtttcccttcttctacatcaaaccaactgaaaatgaaataatactgaggaagttctttcctgaagaaaatggaccagtctcaaaaattgatcctattggtaattccccagtgattatcaagaaggcccagcttgagaagattgctccaacttggatgaatatttcgttgaaaatgaaagaggatgtggagacagacaaagcttttggatgggtcttggaaatgtatgcatatgctgtcgctagtgcattgcatggtgtgcactacagccttcgtaaggattttatgattcagcctccttgggacgcgaaatcggacaacacattcatcatccattacacttatgggtgtgattatacattaaagggtgagctaacttatgggaaaataggggaatggcggtttgacaaaagatcttatcttcgttcaccaccgccaagaaatcttacattacctcctccaggagttcccgaaagtgtggccacccttgtgaaaatggtcaatgaagccactgcaaacattccagggtgggacgaagaaaggtga</cdnaseq>

Protein Sequence

<aaseq>MSGRKNAGKASPFLLLLISVGCFFATYNFLTMVGHGRSRDAGPR KILGGVGGVGGGGSDPSKRFHVALTATDALYSQWQSRVMYYWYREMRDRPGSDMGGFT RILHSGKPDGLMDEIPTLVVDPLPEGADRGYIVLNRPWAFVQWLKKSNIKEDYVLMAE PDHIFVRPLPNLAHGDEPAAFPFFYIKPTENEIILRKFFPEENGPVSKIDPIGNSPVI IKKAQLEKIAPTWMNISLKMKEDVETDKAFGWVLEMYAYAVASALHGVHYSLRKDFMI QPPWDAKSDNTFIIHYTYGCDYTLKGELTYGKIGEWRFDKRSYLRSPPPRNLTLPPPG VPESVATLVKMVNEATANIPGWDEER</aaseq>

Gene Sequence

<dnaseqindica>355..747#850..917#1001..1202#1399..1496#1584..1653#1741..1812#1953..2066#4114..4179#actcttttttttttctcgcccggtcgcggcggccataccgcaacaagttctcctccgccgtcgcttccacggcctccccccatcccaaacgcggtcgatcgccggcgaatccccaccggacgccgaggcgactgccccgccgctcgccaccctccatccccggcgtccccgaagtaacccaccgcctccttcttcttccctccatctctcctgcacccgagtgagggcgaccgcgatctctcagatccaccgaatccggagaccccgctcgcgatcgagtcaaacgcctccgaacccttaatcctcgccgccgccgccgccgccgacgacgacgacgaggacctccccactaggatgagcgggaggaagaatgccggcaaggcctcgccgtttctgctcctcctcatctcggtgggctgcttcttcgcgacctacaacttcctgacgatggtgggccacggccggagccgggacgccgggccgcggaagattctcggcggcgtcggcggcgtcggcggcggcggctcggacccgtcgaagaggttccacgtcgcgctcacggcgacggacgcgctctacagccagtggcagtcgcgggtgatgtactactggtacagggagatgagggatcggcctggctccgacatgggcggcttcacgcggatcctgcactccgggaagcccgacggattgatggatgagatacctaccttggtggttgatcccctccccgaaggcgcggatcgagtaagaaccccgagtttgttcatgttttgcaaacgccattagatggcaaaatcatttcgtgaagttaaaacgagctcttgctgatatgacgttcctacgcagggttacattgtcctaaacaggccttgggcatttgttcaatggctgaagaaatcaaacatcaaagaagagtaagtagatgtattttgtttcttgtaagtttgttatgctaaatgatcttgtaccggcggtttcctaatggaagcatttgcagctatgtacttatggctgagccagatcacatctttgtgaggccattgccaaacttagctcatggcgacgaacctgctgcgtttcccttcttctacatcaaaccaactgaaaatgaaataatactgaggaagttctttcctgaagaaaatggaccagtctcaaaaattgatcctattggtaattccccagtgattatcaagaaggtatctctcatctcgacgcatgattaataggatgcttaggtccggctataggagctgtcaagaactcaagatagcactgtctgcccaaactagttcttttcagttccgcataaaaaacatacatttaagaacattgtgcaatgccatagttcaatactgtttcaatgcattcgtgatgccttcaaaacatctccaggcccagcttgagaagattgctccaacttggatgaatatttcgttgaaaatgaaagaggatgtggagacagacaaagcttttggatgggtcttggaaatgtcggtactattatgtgtacagtatttcttcttgacttaaacatgcacaccccttattaatttgatctttcatattcatgtttataggtatgcatatgctgtcgctagtgcattgcatggtgtgcactacagccttcgtaaggattttatgattcaggtgcttagaaactgtcactagataaatcatctcacgcttcgtcacgatgtcttatatcatataagatgtgcttgatactaattgcagcctccttgggacgcgaaatcggacaacacattcatcatccattacacttatgggtgtgattatacattaaaggtgactactgtttgactttaagtatatgtcatcatatcagttatgtcaattactttgtaaaatctatttatgcattgtcatcaaaattaactttataagcttctcatgaaagagcttttttgtgtcttgtccaaactcagggtgagctaacttatgggaaaataggggaatggcggtttgacaaaagatcttatcttcgttcaccaccgccaagaaatcttacattacctcctccaggagttcccgaaagtgtggtatgtgcttaatatttagtattatttcagtatgactgatgccacttctcttaaacatgattgacctttacatttacaaaattctaaatcaccttgttgagagtacactattttgtcccactgaaatttgccatatattatattgcccacttttagcctgcctatttatcccctgcatttttagctttaggtgggttctatgtcaaacactaccacaatcacaaagagttgactgaatgaaaagtgatattatctactactacctctgtctcagaatataagctctagagttggacacagtgattaagaaagtaagtagaattaaatagggagaggttgggattggttgagaagtggaagtaggtgggaaaagtgaatggtggagggttgtgattggttagaaagggaatgttggtagagaagtagttatatttttggacatatcctgagtgctaaaagttgttacattttgggacggagggagcatctttctaacataattaatgtttatttagtgtaaccctatgtctcatatgctatgtttcctgataatattattgtttctgtgactaacaatggatttcttatcaaatacaagagcatatcacctagtaagtatatagttactgaaaacaagcagatctgagactttaaaaacgtaaaatggtaactgtactaaggtttagatgtggatcaggcgtgcatgttgaatgaacatccatgttgcaccagttaggtacagtaggactgtgttgcaagttacattgttgagcatgattttgaaagcaaagaaagatgaataagaaaagcaaagtccaaccttgatctcccttccccttgatatggtggattcctaatataggctttctttgttcatatgattttccatatgatactataataagcctctcctgaaaatgggtggctactcgaaccgattgaagttgctctttggcataggtagacttcagtacctggataggtcaaccttgctaccatttatttgtcttgtccttcattcctgctattcctcatcatagaagtactccccttccattatattgtagtatggggaaatccaattgcaattgggcatgccaatggttgagtcattgtggtgtgtttctatttgtcaaataattgtaaatcattgtatttttaaactttggttatttgttctctttttgactgattgctagggtgttaagaaaaacaatcatggacttcattcaaaacaagacactatttgacttgaactataaaacaattcacttttcaaccttggtcctgatcttctgctcccaaggtgccactgtagtgtgatgggtctttcaaggatcgaattgggcatgatctggcctcatcctcggggagaccttcaaataaacacattcaatcaagtaatacctactgttttttggtaacctgttttggttctaacacttgatgcaaaccagaattgcttcccttgatcaatattgctgagaataacagccactggtgaaccaatagacacttgttctctcatcaaaaagtttgtttgggccattacataagaggattggtcaactggaaaatcaggacccactaatttaagactttccaaagactcttggccatttcagcttttacaccatacgttccctgcacatctgctccacagcaaactgaatttgttttaacttgcagtgttccctccatttcttgttatatgcagctatagagctttaggggtacagattcaaactttactgcataataatgtctgattattgattcagttcttctacttcttgctgcatcttcagcaagtattggagaaattcttggttccactataaagtattataataacctatggtctggtttcaaagttcaagttgtaaaatggacaattgtgccattattttgtcacctgctgctattttttaaggcaattgaaacagcaaatgacaattatgagagtttcagcagtatcgcaaatacaaagctgagatcagtccatctaattcctaatcttgtgtaccaatctgaattgccttttcaggccacccttgtgaaaatggtcaatgaagccactgcaaacattccagggtgggacgaagaaaggtgattaaatggttttgcctcgctgatactcaattcagctgatagtgtttacattagaagccatcgaaggatctccgtggtcaataaaacaagtgaatcaacgcatgttcttcttaggcggcagacacgattggctaattcctacaaattaacctagaattagtttttggcaagtaaaacacggtagttatttggtcaagtgaggtggtccatttttggtgttgtaaagctgaaacgtgagcttttggtaatactcctagatcattcgattgtattgtaaagcagaaatattagtcaagtttgttgcacgggaatgttactcgataattgaggcttgggatccttcgcgcttgtgccattacatgaaatctttcaaaaagtagtgtttgtcatgagaggattgagagagatggtttgagagggaagcatggaattcacatgacgatcaggtgttcctagttaagttgcatacttacagtccaagtccgaagtccattgatgagc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0386000, RefSeq:Os05g0386000