Os05g0387900

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Revision as of 10:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0387900| Description = Conserved hypothetical protein| Version = NM_001061962.1 GI:115463654 GeneID:4338665| Length = 3069 bp| Definition ...")
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Gene Name

Os05g0387900

Description

Conserved hypothetical protein

Version

NM_001061962.1 GI:115463654 GeneID:4338665

Length

3069 bp

Definition

Oryza sativa Japonica Group Os05g0387900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:18775858..18778926

Sequence Coding Region

18776010..18776164,18776469..18776593,18777012..18777145,18777279..18777356,18777514..18777619
,18778797..18778894

Expression

GEO Profiles:Os05g0387900

Genome Context

<gbrowseImage1> name=NC_008398:18775858..18778926 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:18775858..18778926 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacgaccgagtagccggcggcgcaaccccgccgccacctcctcctccccctcctctcgacgcctccgcgttcacgcacaccccgtactactgtgaagaaaatgttcacttgctatgtaaggaactcattagaagtggaatttctgatcctgctggcaccaacttatatgctgttttcatatcaaatgaggaaaagaaggttcctctctggtatcagaaagcaagtcatagcggtgatggttttgtcctgtgggattatcatgtaatttgtatccagtctaggcgaaaaaatggagaagtacttgatcttgtttgggatttggactccagccttcctttcccatgttcattcatccagtacgtttctgatgccatacgaccattatcatttggcaactctacctacaggaggcttttccgtgtgattcatgctcctgtatttcttcgatcatttgcatctgatagaagccacatgaaggatcatgcagggaattggattcagttgcccccaaagtatgaatcaattgttgcagaagatggaaccaccaataatctgaatgagtacattacgatgtctatggatgatgtgaaggacctggaaagtatggctgatgatgtctactccagcaaacatggtgtggtgataaatgaaactatcctgcctgaattcttctctcgcttgcctggatga</cdnaseq>

Protein Sequence

<aaseq>MADDRVAGGATPPPPPPPPPLDASAFTHTPYYCEENVHLLCKEL IRSGISDPAGTNLYAVFISNEEKKVPLWYQKASHSGDGFVLWDYHVICIQSRRKNGEV LDLVWDLDSSLPFPCSFIQYVSDAIRPLSFGNSTYRRLFRVIHAPVFLRSFASDRSHM KDHAGNWIQLPPKYESIVAEDGTTNNLNEYITMSMDDVKDLESMADDVYSSKHGVVIN ETILPEFFSRLPG</aaseq>

Gene Sequence

<dnaseqindica>2763..2917#2334..2458#1782..1915#1571..1648#1308..1413#33..130#agccgccgccaccgccgccgccgccgtcctccatggccgacgaccgagtagccggcggcgcaaccccgccgccacctcctcctccccctcctctcgacgcctccgcgttcacgcacaccccgtactactggtaagcccttctctctccatacccgattcttttgttccgtgcttggctacttagatgcaggcagcgaggcatgaatgactctcgccgtgaattcttcaccaagtgctgggtagattgcctctggcaaggtgatgaggttgggaattgggatctggttgtttctgcttcctggatggggacggagatgcagggtttattgtttcgttgatggggatagagatgcacagaatttcagttggtaacggtacaatctagacatcaagttaggcgacataattgtaatttatgaatgtttgagacttcgaatgggttttggttagtgatagtctgatagagagcaaagcaactaatggtttcaatcccattcttgagattgaatctatcccgatattactactagttactagtatagtagtatatacaacatattaagcttcagatgattatcatcatcaagctatgtatgaatttcaatgatctcgttctttatcttatagttacattgattaaccttctttggcaaagatctacgtcatccagtggacattgtttttgaacgaaattcagtggatatttttagttcaactaccttagagcccgtgcattgcaacggaaaacaaattgagtttctagcttattaaatcaattgataagtacttatatagtctaagtaatactatgatttttcttattggacaagtaggtgattttgaaatttgggggagccagtagtgaaatggaggagtacctgttgaaagatggtgtaatattatagattgtgggcctagatgttagtggtaggggtggtgtggaaatagacactaccactactaacattttaagtagcatagattcattattttgcatcaatgcaagattgttttaacatttgaacattctaacattatgctttggaataatcacatacatatcttgtgaggattcctttttaaaccaaaattagtatcttatattgcttagggcacctgcatcgtttatagagtaacatgtgactttctgtttatatttttcatctgtgctcattttttgctgtttaccagcttgtgccgatattgttaaattagtttcctctagctgtaaataatgctatcaaaattggaaatattttctatttttactcatcaagtaatgattggatttcatttcccacatgtagtgaagaaaatgttcacttgctatgtaaggaactcattagaagtggaatttctgatcctgctggcaccaacttatatgctgttttcatatcaaatgaggaaaagaaggtggtcttatcatatcttttgtattcgccttctaatcttttgctgtatgtatttacctcttttctgtttttgatcttcttagttaggattgcatttatcccaatatctgtatatatttttatggtgatgatatttcccttccatattccattgccaggttcctctctggtatcagaaagcaagtcatagcggtgatggttttgtcctgtgggattatcatgtaatttgtatccaggtaaatgctaaattcgttattgtgccaaatttatttagttcggtgttattatgcactaccaacataaaatagaacattttatatcatgaagcaagcatttagtgtcatctacttcttgatttgcatatgaaagtctaggcgaaaaaatggagaagtacttgatcttgtttgggatttggactccagccttcctttcccatgttcattcatccagtacgtttctgatgccatacgaccattatcatttggcaactctacctacaggaggtaaacactctgtttattctgttattactggttcaattctttcacaaaacttgtttatggtacacttatgtcatatctagatgttacgaagtttataatatgctcctatctatagtatgtaggagtcagcgtgcatctttttgcatgtgtaaaagggcgttgagatgtacccaggtttagaattgtaacaatgtcagtccatgcaatacaactgcatcaattgtttagatgaagtggaagcgacctctaactcttgatgtacatactaggttagtgttgctttctttttcatctttggggcatttgtgtgtgaaagtatatgaggcaatgcactgatgcatattaagctttcattttcttttccttcttttgcagaagagttctcaaaggtctaacaattttccatctatgtttacaggcttttccgtgtgattcatgctcctgtatttcttcgatcatttgcatctgatagaagccacatgaaggatcatgcagggaattggattcagttgcccccaaagtatgaatcaattgttgcagaaggtatcagatcatatggccaaaccatttcttgtgattttcattgtgctgccttagtcaggctcctagctatgaagatactgccaaaatgataagttgaaaacctgaaatcgcatgtagaaaatttcacggctggataggtttgtgataattagtaacagggtcactggaaataaacaccatctttggtggtatgttggatttagaaggaatcactttaatccacagttttttttgtataataatttgaaattcattgtgcagcacgcagctcgttcttttatacttgtttccttaactgtttcagatggaaccaccaataatctgaatgagtacattacgatgtctatggatgatgtgaaggacctggaaagtatggctgatgatgtctactccagcaaacatggtgtggtgataaatgaaactatcctgcctgaattcttctctcgcttgcctggatgactcaacaggagctatctatcccgattcatgaagctattttgttgtccaatgagatttatgaaccaagtccagagttaaaatgatgttgtccaagcaattgttaacacaatgtttacacagttttgcttgctgagtaaatcacacttgcaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0387900, RefSeq:Os05g0387900