Os05g0401100

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Revision as of 10:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0401100| Description = Protein of unknown function DUF477 family protein| Version = NM_001062021.1 GI:115463772 GeneID:4338729| Length = 14...")
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Gene Name

Os05g0401100

Description

Protein of unknown function DUF477 family protein

Version

NM_001062021.1 GI:115463772 GeneID:4338729

Length

1458 bp

Definition

Oryza sativa Japonica Group Os05g0401100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19514352..19515809

Sequence Coding Region

19514625..19514872,19514958..19515150,19515260..19515718

Expression

GEO Profiles:Os05g0401100

Genome Context

<gbrowseImage1> name=NC_008398:19514352..19515809 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19514352..19515809 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaccctcctctccccctccacattgctctcccctctccgcggctccaagaagaagccggcgagccccgccgcgtcggcgtcgtcgtcgtcgtcgtctcccgccaggtccgtcgtctcctgcgcgctcaggaggcagcagccgccgccgcaggcggtcgccgcttggcgcggagacggcggccgcggtggcggcgtcgggagctgggcgacgttcttgcagcacggcctggccgcggcggcgctgtcgctggcaatcagcatggcgccggcgcccgcgccggccgtggcgtcggagttcgacgtgctgaacggcgggccgccggaggacacgtacgtggtggacgacgccggcgtgctcagccgcgtgaccaagtccgacgtgaagcggctcgtccgcgacctcgagtcccgcaagaacatcaggatcaacttcatcaccgtgcgcaagctcacgagcaaagctgacgcgttcgagtacgcggaccaagtgctggagaagtggtacccgacggtggaggagggcaacaacaagggcatcgtcgtgctcgtcaccagccagaaggagggcgccatcaccggcggcccggccttcgtgcaggccgtcggcgacgagatcctcgactccaccgtctccgagaacctcccagtgctggcgacggacgagaagtacaacgaggcaatctacacgacggcgaagcggctggcggcggcgatcgacgggctgccggaccccggcgggccgacgttcaaggacaacaagagggagtccaacttcaagacgaaggaggagacggaggagaagcgcggccagttcacgctcgtcgtcggcggcctgctcgtcatcgccttcgtcgtgcccatggcgcagtactacgcctacatctccaagaagtga</cdnaseq>

Protein Sequence

<aaseq>METLLSPSTLLSPLRGSKKKPASPAASASSSSSSPARSVVSCAL RRQQPPPQAVAAWRGDGGRGGGVGSWATFLQHGLAAAALSLAISMAPAPAPAVASEFD VLNGGPPEDTYVVDDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFE YADQVLEKWYPTVEEGNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPV LATDEKYNEAIYTTAKRLAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLV VGGLLVIAFVVPMAQYYAYISKK</aaseq>

Gene Sequence

<dnaseqindica>938..1185#660..852#92..550#acacaaaacagcagaaactctagtgatcacaagctcagctcagctcagctccctccttctccccggagaagcagcggccggcacggcagcaatggagaccctcctctccccctccacattgctctcccctctccgcggctccaagaagaagccggcgagccccgccgcgtcggcgtcgtcgtcgtcgtcgtctcccgccaggtccgtcgtctcctgcgcgctcaggaggcagcagccgccgccgcaggcggtcgccgcttggcgcggagacggcggccgcggtggcggcgtcgggagctgggcgacgttcttgcagcacggcctggccgcggcggcgctgtcgctggcaatcagcatggcgccggcgcccgcgccggccgtggcgtcggagttcgacgtgctgaacggcgggccgccggaggacacgtacgtggtggacgacgccggcgtgctcagccgcgtgaccaagtccgacgtgaagcggctcgtccgcgacctcgagtcccgcaagaacatcaggatcaacttcatcaccgtgcgcaagctcacggtacgtacgccatcacatcgcatcacatcacgccgccgccaagccaccgcgcgtctctgaccacctcgccgccggcgcgcggctcgtccgtgacgttaattccttgcagagcaaagctgacgcgttcgagtacgcggaccaagtgctggagaagtggtacccgacggtggaggagggcaacaacaagggcatcgtcgtgctcgtcaccagccagaaggagggcgccatcaccggcggcccggccttcgtgcaggccgtcggcgacgagatcctcgactccaccgtctccgagaacctcccaggttagccttcgccccagacgccggcgtgctctgccgttcacgacgcagaacaaaaccaacaggtctgatcgtgcatgcactgcagtgctggcgacggacgagaagtacaacgaggcaatctacacgacggcgaagcggctggcggcggcgatcgacgggctgccggaccccggcgggccgacgttcaaggacaacaagagggagtccaacttcaagacgaaggaggagacggaggagaagcgcggccagttcacgctcgtcgtcggcggcctgctcgtcatcgccttcgtcgtgcccatggcgcagtactacgcctacatctccaagaagtgaacagcagcggctacctgttctttccaacaaaaaaagagagaaaaaatgagcagcatatggtgctgctctgtacagtaaatttgctcaggagatggctaaatctcccggttttctgtcggaattttagaggcgaaacagagaattatgatgaacacaggtgcaccaccgtgccggttaatttttattgtagtagcataactgaggcactgagcaattaggtgcaaatcagcacttccttaccccgattcctcttcttctataaccatttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0401100, RefSeq:Os05g0401100