Os05g0401300

From RiceWiki
Revision as of 10:20, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0401300| Description = Twin-arginine translocation pathway signal domain containing protein| Version = NM_001062023.1 GI:115463776 GeneID:43...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0401300

Description

Twin-arginine translocation pathway signal domain containing protein

Version

NM_001062023.1 GI:115463776 GeneID:4338731

Length

3115 bp

Definition

Oryza sativa Japonica Group Os05g0401300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19521115..19524229

Sequence Coding Region

19521213..19521551,19521669..19521748,19521946..19522006,19522777..19522834,19523453..19523510
,19523638..19523710,19523965..19524057

Expression

GEO Profiles:Os05g0401300

Genome Context

<gbrowseImage1> name=NC_008398:19521115..19524229 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19521115..19524229 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcccccgccgtgctcctccgcctcgccccctcgcctccgtatccccagaacccgccgccccggcggcggagccccgcctcggcatgcggcgcctcgcgccgcgacttcgccatccacaccgccatcgcctccgcctccgccgcggttgcggtctccgttcgtccggccaccgccgccgccgccgacgaggaggcgccaccgggggagccttcccaaaataagaagggctcccctctgctgggcggcatcgcgaacaccaagtcgtggtcgcagtactacggcagcggcttctccatccgcgttcccccttccttcgacgacatcttggagcccgaggagttcaacgtcgggatgacctactacggcgacaaggcgaagcccaggacatacgctgctcgcttcgcgtctccggacaggtctgaacttgtaagcgtggtaattaagccatcgaatcagctcaaaatcacattcctagaggccaaagatataacagacctgggcactttaaaggaggcatcaaagatatttgtacctggtggcgcaaaattatactcagctcgaacaattaaagttaaggatgaagatgatataaggacatattacttttatgagtttggtgtggacaaagaacatgttgctgtaatggctactgtgaatagtggaaagacatatattgccggtgccactgctccagagacaaagtgggacgatgatggcgtgaagttgcgatcggctgctgtatctttgtctgttttatga</cdnaseq>

Protein Sequence

<aaseq>MAPAVLLRLAPSPPYPQNPPPRRRSPASACGASRRDFAIHTAIA SASAAVAVSVRPATAAAADEEAPPGEPSQNKKGSPLLGGIANTKSWSQYYGSGFSIRV PPSFDDILEPEEFNVGMTYYGDKAKPRTYAARFASPDRSELVSVVIKPSNQLKITFLE AKDITDLGTLKEASKIFVPGGAKLYSARTIKVKDEDDIRTYYFYEFGVDKEHVAVMAT VNSGKTYIAGATAPETKWDDDGVKLRSAAVSLSVL</aaseq>

Gene Sequence

<dnaseqindica>99..437#555..634#832..892#1663..1720#2339..2396#2524..2596#2851..2943#gtgcgtgcgcgttcctctcaccacggcgaacttccagcctctcccgccgcggcttccgcgccgtccgctcggcagtggcgccgccgcctcgccgcgcaatggcccccgccgtgctcctccgcctcgccccctcgcctccgtatccccagaacccgccgccccggcggcggagccccgcctcggcatgcggcgcctcgcgccgcgacttcgccatccacaccgccatcgcctccgcctccgccgcggttgcggtctccgttcgtccggccaccgccgccgccgccgacgaggaggcgccaccgggggagccttcccaaaataagaagggctcccctctgctgggcggcatcgcgaacaccaagtcgtggtcgcagtactacggcagcggcttctccatccgcgttcccccttccttcgacgacatcttggagcccgaggtctctcgtctcctcccaatgtccccttgcgcgttcggtttcctcaggcattgtagtcgcgcgaggccgcgagctcaacattttggttttaacctcggaattttatcgacaaatcaggagttcaacgtcgggatgacctactacggcgacaaggcgaagcccaggacatacgctgctcgcttcgcgtctccggacaggtaggtaagtaaggtcccgtttgacttatcgagctctctagcatttcgagatatgcgtaatgattataaattttacaatactattaatctcaaattcgcctacgaaaatagctctaggaagaaattgggtagaatttgtatcactaaatacattcaacgagctaagatgattaccctgttatttttctgtaatgcaggtctgaacttgtaagcgtggtaattaagccatcgaatcagctcaaaatcacattcctagaggtttgcacagcaactagttatttttctgttactatagtttgattgttttgtgttctccctcccgaatttttctgtatgtgcagcatttattttgtctaaaagaaaaataatggtagagcaccggttcgttttttttttagttggtcgtgatgcaagataatgtgatgatttgtataatctgatgttctcaactctttggaatgaccaacgacccatttcctaatcattaaagcggcttagctttgcacactagttagtagttactataaattgatttacaatattgtgcagttgtctcactgtgttatgcaaggtagtatgattgatggcactttattttattttatttttttgataaagagaggcaggatcctcctgttttcattaacgaaaacgaaatgatgacaagtttgatggtgctttatatgttgataatttaccatcctttgataaacacccctaaacaataataagaattatatagaaataaatatagtattgataacacatgtcaagtcccaattaattatatttataatgaacaatagtagcattgattcacagagaggcgacaaacattactttttttgctccaactgactagtagaaactggtactgcactagtaggtgcaggagtgttcataatgtttctttatatcaacaattctctgtaatcaaggcccaaagacatgttttttattttgaattattttatgttgcacacaatcagccaaaaaatttatgttctgacacaaacattggtttgtaggccaaagatataacagacctgggcactttaaaggaggcatcaaagatatttgtacctggtgattactgttatcttagacttcagagatgtactttgcttttaaaataagtttctaagatgaataaggacacggcatattcacagttttcacttatcaaaggaaattgctaactcttgatctagcttcttgtgtgggcgctgctgtatatatgatgtttcacctgaatgacctaacatctaaaacatcatgtttacaaattgaaggggcatcttatcttaacaatgttcttatgatgttggttaattttgcatcatttttaaaataaatgtccagcaaggaagtgcactattaactgctttcttaatgagttgcacaatgtactcacatgcttactacattctattttgaactgtttctttcacattgtacaactttgtcgttatctactgttgtcttcgtaaaactttgtatgatcaatattgatgcttggttaaaatattcaaagaaatataaacttgtatccattttttgtttccatcacttcaaaaaattatatgaggaaacatgaagcaaaaatattctgttagcatgtagtgctagcataatgtactcatttggaaatatctgacttagctcttccaatttgtttgtaaattcttttgtctcatttcataggtggcgcaaaattatactcagctcgaacaattaaagttaaggatgaagatgatataaggtactatatgaccttttctatttattttgaggcaaaaaaaaaatcttatccctcatcaataagtgtcccaatttggacagaattgttcttgtattttgattttggtcatgagagattggttctgcaggacatattacttttatgagtttggtgtggacaaagaacatgttgctgtaatggctactgtgaatagtggaaaggtattcactcatttcctttatgtttttgtgggcagttctgttctgggaaaatgttttcctgtcttcatgtttgtttctgttctgggaacaacaatggaccaaatatacagatgtgccgaaagcttgtaatctgtagctttatcttagagatttaatgacattatcgattcattttctttttaattgctggactttggcatcctatttcggtcacagtatttaatttgaattgacatgtggtgttgtgtggacagacatatattgccggtgccactgctccagagacaaagtgggacgatgatggcgtgaagttgcgatcggctgctgtatctttgtctgttttatgatgcaaagcagaataccaagcatttattcagaatttcaggccgcagctgcatagatgaatcatatcatcttattttttggtcgtgtttttttagataatagatagataaaacatgtcctctacacccaaatgggtgtacgcagccaaaggataatacaagagtacttagaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0401300, RefSeq:Os05g0401300