Os05g0409100

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0409100| Description = Conserved hypothetical protein| Version = NM_001062061.1 GI:115463852 GeneID:4338770| Length = 1052 bp| Definition ...")
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Gene Name

Os05g0409100

Description

Conserved hypothetical protein

Version

NM_001062061.1 GI:115463852 GeneID:4338770

Length

1052 bp

Definition

Oryza sativa Japonica Group Os05g0409100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19984172..19985223

Sequence Coding Region

19984172..19985111,19985207..19985223

Expression

GEO Profiles:Os05g0409100

Genome Context

<gbrowseImage1> name=NC_008398:19984172..19985223 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19984172..19985223 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgctagcacgtccttccctagctgcgttgctcgcgctgtgcgcattcgccgcggtggagcggccgccggccggcgtcggcgccgccaacgtgccgatcacgacgtgccggtccttctgcggcaacatcacggtggactacccgttcgcgctccgggcggggtgcggccacgccgggttccgcgaactgctctactgcatcaacggcgcgctgatgctgcacctcccgtcgggctcctaccgcgtcctcgacatcgactacgcctaccgcggcctcaccctgcacgacccggccatgtccgactgccgagcgctcgaccgctcccggggcggcaggggcaacgggttcgtcgtcgagccgtggcgcgcgccgtacctggcgccggacccggacaacgtgttcctcctcctcggctgccgcgccagctcgccgctgttccagggcttccccgaccgccacctgccgtgccggaacgtctccgggatgggctgcggcgagtactacggctgccccgcgtgggacgactacggcgggcggcggccgtcgggcgccgcgtacggcgccgccgcgccgcccgagtgctgcgcggtgtcgtgggacgccatccgggcggtgaacgtgagccgcctcgagtgcgaagggtacagcagcgcgtacagcctggcgccggtgcgggcggccgggccggccgggtgggcgtacggcatccgggtgtcgtgggcgctgccggaggcgaaccgcgggttctgcggcgcgtgccgcgccacgggcggggtgtgcggccacgacggggacagccacggcgacctctgcctctgcggggactggaactccacctccaactgcgactcctccgccgacgcggcacggccaaatgccgcctccgcggcgccgcgtgccatcgtcgcgctttgcttgggtgttcttgcctcaggattttcatttctgtaa</cdnaseq>

Protein Sequence

<aaseq>MAPLARPSLAALLALCAFAAVERPPAGVGAANVPITTCRSFCGN ITVDYPFALRAGCGHAGFRELLYCINGALMLHLPSGSYRVLDIDYAYRGLTLHDPAMS DCRALDRSRGGRGNGFVVEPWRAPYLAPDPDNVFLLLGCRASSPLFQGFPDRHLPCRN VSGMGCGEYYGCPAWDDYGGRRPSGAAYGAAAPPECCAVSWDAIRAVNVSRLECEGYS SAYSLAPVRAAGPAGWAYGIRVSWALPEANRGFCGACRATGGVCGHDGDSHGDLCLCG DWNSTSNCDSSADAARPNAASAAPRAIVALCLGVLASGFSFL</aaseq>

Gene Sequence

<dnaseqindica>1..940#1036..1052#atggcgccgctagcacgtccttccctagctgcgttgctcgcgctgtgcgcattcgccgcggtggagcggccgccggccggcgtcggcgccgccaacgtgccgatcacgacgtgccggtccttctgcggcaacatcacggtggactacccgttcgcgctccgggcggggtgcggccacgccgggttccgcgaactgctctactgcatcaacggcgcgctgatgctgcacctcccgtcgggctcctaccgcgtcctcgacatcgactacgcctaccgcggcctcaccctgcacgacccggccatgtccgactgccgagcgctcgaccgctcccggggcggcaggggcaacgggttcgtcgtcgagccgtggcgcgcgccgtacctggcgccggacccggacaacgtgttcctcctcctcggctgccgcgccagctcgccgctgttccagggcttccccgaccgccacctgccgtgccggaacgtctccgggatgggctgcggcgagtactacggctgccccgcgtgggacgactacggcgggcggcggccgtcgggcgccgcgtacggcgccgccgcgccgcccgagtgctgcgcggtgtcgtgggacgccatccgggcggtgaacgtgagccgcctcgagtgcgaagggtacagcagcgcgtacagcctggcgccggtgcgggcggccgggccggccgggtgggcgtacggcatccgggtgtcgtgggcgctgccggaggcgaaccgcgggttctgcggcgcgtgccgcgccacgggcggggtgtgcggccacgacggggacagccacggcgacctctgcctctgcggggactggaactccacctccaactgcgactcctccgccgacgcggcacggccaaatgccgcctccgcggcgccgcgtgccatcgtcgcgctttgcttgggtgttcttgcctcaggtaagcatcgtgaagacatcttcttctcttttttggggtgaatcttattccttcgatcgtttgctgacatgcaagattgctgcctttttctgcaggattttcatttctgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0409100, RefSeq:Os05g0409100