Os05g0409400

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0409400| Description = MAP65/ASE1 family protein| Version = NM_001062063.1 GI:115463856 GeneID:4338772| Length = 5332 bp| Definition = Ory...")
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Gene Name

Os05g0409400

Description

MAP65/ASE1 family protein

Version

NM_001062063.1 GI:115463856 GeneID:4338772

Length

5332 bp

Definition

Oryza sativa Japonica Group Os05g0409400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:19995572..20000903

Sequence Coding Region

19995721..19995774,19996242..19996445,19996521..19996775,19996854..19997069,19997669..19997824
,19997938..19998097,19998847..19998998,19999114..19999201,19999613..19999684
,19999770..19999846,20000224..20000502

Expression

GEO Profiles:Os05g0409400

Genome Context

<gbrowseImage1> name=NC_008398:19995572..20000903 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:19995572..20000903 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacggcgccgccgcgggtatcctgcggctcccttctccaggaacttcaggtactctggggacaaattggccagaatgaagcagaaagagacaggatgatattgcagctagaggaggattgcctcaatgtttacagaaagaaagtagagcaaacaagaaagcaaaaggaggacctgattgaagaactttcttttggtgaattggatattgagaaaatcctttctgctcttggagagcgagaatctttttctagggtagagaaacttgggggtacattactggaacaacttgcgaaagtagagcctgttctggaagatttgagacggaggagggatgagcgagtcgaggagtttatggttgtacaggcgcagatagttcggttacatgcagaaatttcaggaacaattgaaaatggggatcctgtacctcctttggtggatgagacaaacctatccttaaggaggctagaagagtttaagagccagcttaaggagctccaaactgaaaagaatctcaggctgcaaaagattgatgtacagatcaattgtatccatgaaatctgcaacatgatgtctcttgatctcaagaaagaactttatgatgttcatcccagcttcgttgagttgggaaggaccacatcgatgagtataagcgacagcacacttgaaaggcttgcaggaaaagttcattcgttaaatcaagaaaagaaacagaggcttcggaagttgcaagatcttggcagcacacttattgagttatggaacctaatggacacaccaactgctgaacagaaatgctttgaccatgttacttctttgatttcagtctcaccaagcacaaaaatgccccaaggatgccttgcacgtgaacttattgagaaggtagaggttgaggttaagaggctgaattgtttgaaagccagcaaaatgaaagagcttgtattaaagaaaatgattgagcttgaagagatctacaaaagtgttcacatggatattgacagtgattacgagaggagaattctcaatgatcttattgattctggtaaagcagatctctcagatttgcttacaggaatggatggtcgaattacaaaggcaagagagcacgctctaagcagaaaggaaattctagagaaggttgaaaaatggacattagcatctgaagaggagagttggcttgatgaatatgaaaaggatcagaatcgctataatgctggtcgaggagctcacaaaaatctcaagcacgctgaaaaagcaaggatgctggttagcaaaattccatctctgctggagaatttaactgctaaaattaaagcttgggaaaaggagaacggtgtcccatttatgtatgataagataaggctgttggatagtttagaagaatacacctcaagaagacagcagaaagatgaggagaaacggcgatcgcgggagctcaagaaactgcaagaacagtatgcagcagaacaaggtgctacgtttggaacgaagccaagccctgcgcgtccaccttcggctaggaagcctcttgggcagagctcgaacgccaacataatcagtggaactcctaccagccgccgtgtctgtaccccgatggcacgcaagggaggcttgtcttctggaaaagtgaaagaggctggcaagacagcctttataccggcaaactatgtggcccttcccaaggattgctcagacaattctaacctgtga</cdnaseq>

Protein Sequence

<aaseq>MATAPPRVSCGSLLQELQVLWGQIGQNEAERDRMILQLEEDCLN VYRKKVEQTRKQKEDLIEELSFGELDIEKILSALGERESFSRVEKLGGTLLEQLAKVE PVLEDLRRRRDERVEEFMVVQAQIVRLHAEISGTIENGDPVPPLVDETNLSLRRLEEF KSQLKELQTEKNLRLQKIDVQINCIHEICNMMSLDLKKELYDVHPSFVELGRTTSMSI SDSTLERLAGKVHSLNQEKKQRLRKLQDLGSTLIELWNLMDTPTAEQKCFDHVTSLIS VSPSTKMPQGCLARELIEKVEVEVKRLNCLKASKMKELVLKKMIELEEIYKSVHMDID SDYERRILNDLIDSGKADLSDLLTGMDGRITKAREHALSRKEILEKVEKWTLASEEES WLDEYEKDQNRYNAGRGAHKNLKHAEKARMLVSKIPSLLENLTAKIKAWEKENGVPFM YDKIRLLDSLEEYTSRRQQKDEEKRRSRELKKLQEQYAAEQGATFGTKPSPARPPSAR KPLGQSSNANIISGTPTSRRVCTPMARKGGLSSGKVKEAGKTAFIPANYVALPKDCSD NSNL</aaseq>

Gene Sequence

<dnaseqindica>150..203#671..874#950..1204#1283..1498#2098..2253#2367..2526#3276..3427#3543..3630#4042..4113#4199..4275#4653..4931#gtcgattcccctttctcccgctcttcccctttcaaatctctctctagccgctcctctctataaaccctagtactcggggggcaccgcgcgctccgtcccccaaatccgatccatcccgcgagatcgccccgcgcccttccccctcgataatggcgacggcgccgccgcgggtatcctgcggctcccttctccaggaacttcaggtccgatccccgcgcctgctctgttcatacggcctcctgggacgcggttttggattcaggtcgagggcgtgttctttttggtgcgattttttttagggaagtcgtggttgatggtgggtgagggattcgaatcatatatttattttttattttggcttttgtgaggaaagattgtttgctctttggcggcaaaggtactggtatgtggccatgtgggcggaatcggacgacgatctttgtgttttgtgatcctttgctctgtatatcgtgagtacttgttagaaacaaagttatcgctccttatttcgtgaattcgattgtgctcgttattagattttgtggcgtcccctgatgataatctcggttccctcttttgtatccatgtgttctcatcacattggatgtaaattctttaatatcatttatgcctttttatacgaatctgctactgttatctgttgatccaggtactctggggacaaattggccagaatgaagcagaaagagacaggatgatattgcagctagaggaggattgcctcaatgtttacagaaagaaagtagagcaaacaagaaagcaaaaggaggacctgattgaagaactttcttttggtgaattggatattgagaaaatcctttctgctcttggagagcgagaatctttttctagggtgtgtgaattgctttatccattccatgcctttttgtatgtatcattcgcttattgtatgtttttacatatgcaggtagagaaacttgggggtacattactggaacaacttgcgaaagtagagcctgttctggaagatttgagacggaggagggatgagcgagtcgaggagtttatggttgtacaggcgcagatagttcggttacatgcagaaatttcaggaacaattgaaaatggggatcctgtacctcctttggtggatgagacaaacctatccttaaggaggctagaagagtttaagagccagcttaaggagctccaaactgaaaaggttgtgcaccatctttaaaactttgcctcccagattcttgagctcttatgtttatattgattgttttaaaattttcagaatctcaggctgcaaaagattgatgtacagatcaattgtatccatgaaatctgcaacatgatgtctcttgatctcaagaaagaactttatgatgttcatcccagcttcgttgagttgggaaggaccacatcgatgagtataagcgacagcacacttgaaaggcttgcaggaaaagttcattcgttaaatcaagaaaagaaacagaggcttcggaaggtatttatatttgttgcctcacttattaattgtatctctcaaaacattgttcatatagtaaaagaagttgctacatcattcttattgcaacactttcacattgttcgtttgtttctactactgtttgaaaatttggccttcagtatgctagatattattatgtgattcaccttgacaaaagcataattttcaggaaattctctagggccatataatggaaattaagttcattgtattgagagcataatttttgagatcataatgtaacagcttaccatcttatattttcatttttcttacttcatgtacaccatctccggatactcagattgtgtactgtcaagagaatggtttcctgactttaccattcataacagagtcacactaatgtaatatttttacgtaccattatactacagcatttttattttccatcaagtttttattcctcatgtggtccctcttgttcttcacatcgtctgtgcttcgctggtgatttgcatgttattacttcatgaatttacagacgtttattttcactccatgttttttcctcatatatctatactcactgctgaactttgctttctgttttgcagttgcaagatcttggcagcacacttattgagttatggaacctaatggacacaccaactgctgaacagaaatgctttgaccatgttacttctttgatttcagtctcaccaagcacaaaaatgccccaaggatgccttgcacgtgaacttattgagaaggttacaattgatcgaccattttatgttcttttgctttatttggattgtcattgaagctaatgtctctgagttaacttaattattgtgtaaaatcctttcactccttattttaggtagaggttgaggttaagaggctgaattgtttgaaagccagcaaaatgaaagagcttgtattaaagaaaatgattgagcttgaagagatctacaaaagtgttcacatggatattgacagtgattacgagaggagaattctcaatgatcttattgattctggtaaacttctctcttgttcccttcaacctgagaaattcatgactgaagtcatcatacagttctcttcttatattgcgcctttccattgtgttctggtagtgaagcgaactatgttttcatttgacttgtagacaaactcaaatcttggcataagaatgaaataggttccttctagaacaaaatgtacacgtattgtttggtttctaggaaaggcctgtttaattgaaaccactggtttcttattatagcataccctaatccacaaacattatcatgtcgttatcatctcttaatacttttgtgcatttgttatttgattataaacccaccaaatactgtttagaacgtgatgtaattgtgccccatataacttgcacttatccttagaatgctattataatatttttccttgatagactgaattatccttgtactgctattgtaatgtgcgttttacatctggatacacaagttgcttcccttcttcatgaaaaagaagaatgattagttaattattttcattattccaaatatttagtgtactattaataagatttatgattagcaattacaatataggttgtttgcttcacttttagcctttatgttgattcagtcttcaattccatctggatttatccaattgttgtggaatttattagtcacttttgataattttctctttagtgtatccccttatggtttcttactgctaatcatcaaatttgatgatatttgcaccttgtcaggtaaagcagatctctcagatttgcttacaggaatggatggtcgaattacaaaggcaagagagcacgctctaagcagaaaggaaattctagagaaggttgaaaaatggacattagcatctgaagaggagagttggcttgatgaatatgaaaaggtaccttaaattttctctttttgacaggatgctcttcagtttaaacagttgcaacatatcttcagtctaacttcatctgtcatatatcaggtctaattcttagttttcatttcaggatcagaatcgctataatgctggtcgaggagctcacaaaaatctcaagcacgctgaaaaagcaaggatgctggttagcaaaattccatgtaagcctatatacttgtttttttttgtggctgtactggtttattggagataccagatatcttatgttttaatgtactccaatcattaaagatacttcaaaaggcctatcatcactattttggtttacataaagggtagctaatgagtacatcagtattcaattgatcatttctctttttcgtttattccttaactatatgtctatatccatatgctaaattgcttcttgaaatattcttagtggtccctatttggtgtaggatctaatttctagttgcattaacaactaccattagttctaacatctgaactttatttctggcacttttttcttgttttaagttttttttatcaacaagttatcactgaatatacctaattttcaacttccatgtgattttatactttagctctgctggagaatttaactgctaaaattaaagcttgggaaaaggagaacggtgtcccatttatgtatgataaggcaagtcccgtttctcaatgctactgttttaattaattttgtcaatttcatcttgcttatttacaatttgggctttcatttacagataaggctgttggatagtttagaagaatacacctcaagaagacagcagaaagatgaggagaaacggcgatcgcgggttggtttttgttttctctgccatctgtcgtgcccaatcttggttgcattcgttagtgtgttcagtttgtagtttcctttagcatatattgctagtatatccataactatgcttttgcttggcaggcggatctaccgctgacactaactgttgggggtgacccctagtgtccatggtgggcggacgtcctgccatggcacgctagatactttaggcgtcttgtttttttatcacttattggcagttttgccagctgaatgtctcctttatttcatatgcatgatctacttttagtgatactatcatggaaggagaggttaacttccctggtacaaattccatgacttaatgtttttggatgtttctactctttgcaggagctcaagaaactgcaagaacagtatgcagcagaacaaggtgctacgtttggaacgaagccaagccctgcgcgtccaccttcggctaggaagcctcttgggcagagctcgaacgccaacataatcagtggaactcctaccagccgccgtgtctgtaccccgatggcacgcaagggaggcttgtcttctggaaaagtgaaagaggctggcaagacagcctttataccggcaaactatgtggcccttcccaaggattgctcagacaattctaacctgtgaggctgtgagaatgtcaacaccagttataagtaggagtcttttactcgggcttctgccttttcattttgcttgatctattcgattagcatcttgctaaatagttggtccgttatgtgatctgaacttttgatgcgaaaacctttctgacgtgaaatgaccccatctataggatgattctgtactggaagattcctgattttaacttgacagtgtccatttaaattatgttgtctttcagtccaaaaaaagttgtctttatgtagtttacttgactcacctaaagtaaatttcatctcccgatagtttcttcggttgatactgcagttatctgcaaaatggttttctaatttgttcttatacttgtttctcaacaattatatatcaaaatggagatttccttg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0409400, RefSeq:Os05g0409400