Os05g0410900

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0410900| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001062070.1 GI:115463870 GeneID:433877...")
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Gene Name

Os05g0410900

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001062070.1 GI:115463870 GeneID:4338779

Length

4341 bp

Definition

Oryza sativa Japonica Group Os05g0410900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20094006..20098346

Sequence Coding Region

20094311..20095217,20095297..20096089,20098144..20098273

Expression

GEO Profiles:Os05g0410900

Genome Context

<gbrowseImage1> name=NC_008398:20094006..20098346 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20094006..20098346 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agcttcacctgcagaggaggagggagaagaacaatggcggaggatggaagaggagaggagaaggccgtggacgtggtggcggtgaagaagccgaagcagggaggcttcaggaccatgccgttcatcctagcgaacgacttctgcgaccggctcgcgaatgtggggttcagctccaacctgatcacgtacctgaccctgcagctgcacctccccctcgtcgacgcctccaacacgctgaccaacttccacggcaccgccaacctcaccccgctcgtcggcggcctcatcgccgactccttcgccggcaggttctggaccatcacgttcggctccgtcatctaccagctcggcatggtcttcctcaccctctccgccgcgctcccctcgctccgcccgccgccctgcgccaagcacgccgccgactgccagcgcgcctcgtcctcccagatcgccgtgctctacgcctcgctgctcttcacctccatcggcaccggcggcacgcgcccctgcatcatggcgttcggcgccgaccagctcgagctcgacgctggcgcgcgcgggcgccgcgggcgcaaggggcccaagtggagcttcttcaacctctacttcttcggcatcgagctcgccaagctcaccgccgtcaccgtcatcgtgtacatccaggagaacgtcgggtgggggtggggcctcggcgtgcccaccatcgccatgttcgccgccgtggtcgccttcgtgtccggctactcgatgtacgtcaagatgcctcccgccggcagccccctggtccggctggcgcaggtcgcagccgccgccttcaagaagaggaaagccgtcatgccggagccaagccgcctctacgaggacaaggtgctcgacgccggcatctccaccaccggccgtcttctccacaccgatcagctaaagttctttgacaaggcggccattatcacggacggcgacgtgctgccgtccggcgagccgaagctgtggcggctgtcgacggtgcaccgcgtcgaggagctcaagtcgatcctccgcatgctgcccatctgggcggcgggcatcctgctggtgacctcggcgtcgcacaacagcagcttcgcgatccagcaggcgcgcaccatggaccgcgacatcacgccgcacttcaagatcccgccggcctccatgctcatcttcaccaacctcgccatgctgctcaccctcgccttctacgaccgcgtcctcgtccgcgtgctccgccgcttcacgggccacccaaacggcatcacccacctccagcgcgccggcgtgggcatgaccattgccatgctcgccaacgcggtggccgcggtcgtggagagtcgccgcaagtccgtggccgcggcgagcggcatgctcgacgcgcccaagggtagctcgctgcccatcagcgtcttctggctggtgccgcagtacgccatccacggcgtcgccgacgccttcatggacgtcggccgcatggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctctactggctcaccatgtcgatcggcagctacctcggcacgctgctcgtcaccatcatccacgccaagacgcagcggagcgggcagtggctgcaggacaacctcaaccgagccaagctggacagctactactggctcgtcttcggcttgcaggggctcaacctcatctactacttcgtctgcgtcaggtactacaccttcaagccattggagacggtgaaacctgaggaggagctcgagctctaccgtggaaatggcaacgagggcgatggcaagaaaggaggaaccttgaagtag</cdnaseq>

Protein Sequence

<aaseq>SFTCRGGGRRTMAEDGRGEEKAVDVVAVKKPKQGGFRTMPFILA NDFCDRLANVGFSSNLITYLTLQLHLPLVDASNTLTNFHGTANLTPLVGGLIADSFAG RFWTITFGSVIYQLGMVFLTLSAALPSLRPPPCAKHAADCQRASSSQIAVLYASLLFT SIGTGGTRPCIMAFGADQLELDAGARGRRGRKGPKWSFFNLYFFGIELAKLTAVTVIV YIQENVGWGWGLGVPTIAMFAAVVAFVSGYSMYVKMPPAGSPLVRLAQVAAAAFKKRK AVMPEPSRLYEDKVLDAGISTTGRLLHTDQLKFFDKAAIITDGDVLPSGEPKLWRLST VHRVEELKSILRMLPIWAAGILLVTSASHNSSFAIQQARTMDRDITPHFKIPPASMLI FTNLAMLLTLAFYDRVLVRVLRRFTGHPNGITHLQRAGVGMTIAMLANAVAAVVESRR KSVAAASGMLDAPKGSSLPISVFWLVPQYAIHGVADAFMDVGRMEFLYDQAPESMRST AAALYWLTMSIGSYLGTLLVTIIHAKTQRSGQWLQDNLNRAKLDSYYWLVFGLQGLNL IYYFVCVRYYTFKPLETVKPEEELELYRGNGNEGDGKKGGTLK</aaseq>

Gene Sequence

<dnaseqindica>3130..4036#2258..3050#74..203#actgaaagctcattgctcctgggtagagagagagagagagagagagagaaagcagaggctgctgcaactgtgaagcttcacctgcagaggaggagggagaagaacaatggcggaggatggaagaggagaggagaaggccgtggacgtggtggcggtgaagaagccgaagcagggaggcttcaggaccatgccgttcatcctaggtaatctgattttagtatctttgcttcacaaatgctgcttcttttctttgcttgatcaggctcacatgatcacatcagaacatgaatgattagatcattaaaattagtagtttggcaaagattgatccaaaagatttttgtttaattccatctcggtgttcttggggatcttgggctagctggataccaccaggctgcagctgcatagagtaggaattaattctgaggtcatgtagtcaaacaaggtgtctactagtcaaaacgacattcgaagacaaattgcacggttccatgagcttgtaggaaacgaaatgacgttttctttggactgacgcccaagaacccgacctgtcgaacagcatcaaggatcatctttacgcatagcccaagtcctaaaaatgccaaacagtagctctcatgtggttgcgaccttgtaaaaaaacgatatcactactgttgctacgtgcagaatcagaatcagatctatggcaaagctttcacgaccactaaattcaagcagcctattttgtcaaatatccaaatatccttttgatcgtatatatgaagggctaaaacttttttgagggaaatgaagggctaaaactgtaacaaagtttcccttgttttgaattactacttaactactttttttttaactagggctggaaaaggccccatttctatacttaactactgtataagagaaggaatctccagatatttgtgatgaatataaaaagagctcgacaattaggtatgagtacatgacacccttcaccagaaacaaacacgagaatgatagaatatacatacgagctcgacacctccctttatatatatataaaattctgagtttatcaggtttgcattttctatcaagggactgagagcaaattttccacaaactttttaataaatcaatgaaacatttctatcaaacatttgccggcttggcgaaaaaaaatacagacattttttcacacggaatgagtactaaagtatagtggaacggaaatttcagtacgcattactttgcagtgtaggttcaaacttagctatctaaaagaatatagcgttttctcaaagaggatttttaccatccaacagtacctgacggtatcaaatcgtggccgttggatcgagcagatccaacagctgacggaattaggtaccgccaggtaccacttctgcctctgatttggtacttcgcggtgaatagaggtggaggggcaagaatgtaatttcgcgtgcggatgaatagagctagaggtgtgcgccgtctccttcccagccgtcatgccgcatctcctccaccaccagctcctcctctgtcggcacctacttcgccgtcagcgcctcctccgtcgcctcgccacccttgccgccaccacctcctccacaagtgctgctttgctaccgccgcggctgccacctccttcaccggcgcctactccgcggtcgccatctcctcctcctcctccatcgcggtgtcgcctccaccacccccgccaccatctcctccaccgctatttttcctcatgatcgtactcctctaaaattgaacggttcgatttttttggtacctacaggtaccggtatcaggaggtacaaattgctggaccgtaaaaatgctatttctcaaaagggaaatggtattcttaccactgttttcaattgtgattttgtcctcatgtgtttttaaccgaaacttgtgttcgcccttatcccattcagagagaacttaacgccttaacggtgttaaaaaaacatgtcaaaatgagcaaagtccattgcaagcttatattttccctaatttcttaagtcgaatatggagtgattttacatacttgtaaaatttggtacctctgacagtacaatgtacgaaaatttacaataattttttttgtacctagctcttaataactctcaagaaaccgtaaatttctccttttctaaacagggactagaggaggaaattgttgtgtttattttagaactggctctcaacaatttttgaagttgtaacatttcccgccatccctcaccgaatgcagcgaacgacttctgcgaccggctcgcgaatgtggggttcagctccaacctgatcacgtacctgaccctgcagctgcacctccccctcgtcgacgcctccaacacgctgaccaacttccacggcaccgccaacctcaccccgctcgtcggcggcctcatcgccgactccttcgccggcaggttctggaccatcacgttcggctccgtcatctaccagctcggcatggtcttcctcaccctctccgccgcgctcccctcgctccgcccgccgccctgcgccaagcacgccgccgactgccagcgcgcctcgtcctcccagatcgccgtgctctacgcctcgctgctcttcacctccatcggcaccggcggcacgcgcccctgcatcatggcgttcggcgccgaccagctcgagctcgacgctggcgcgcgcgggcgccgcgggcgcaaggggcccaagtggagcttcttcaacctctacttcttcggcatcgagctcgccaagctcaccgccgtcaccgtcatcgtgtacatccaggagaacgtcgggtgggggtggggcctcggcgtgcccaccatcgccatgttcgccgccgtggtcgccttcgtgtccggctactcgatgtacgtcaagatgcctcccgccggcagccccctggtccggctggcgcaggtcgcagccgccgccttcaagaagaggaaagccgtcatgccggagccaagccgcctctacgaggacaaggtgctcgacgccggcatctccaccaccggccgtcttctccacaccgatcagctaaagtaagttgaactcctatagcaagcggcgaactggcgatgcgattaggggctaattaatcaactgtttgttcttgcaaaggttctttgacaaggcggccattatcacggacggcgacgtgctgccgtccggcgagccgaagctgtggcggctgtcgacggtgcaccgcgtcgaggagctcaagtcgatcctccgcatgctgcccatctgggcggcgggcatcctgctggtgacctcggcgtcgcacaacagcagcttcgcgatccagcaggcgcgcaccatggaccgcgacatcacgccgcacttcaagatcccgccggcctccatgctcatcttcaccaacctcgccatgctgctcaccctcgccttctacgaccgcgtcctcgtccgcgtgctccgccgcttcacgggccacccaaacggcatcacccacctccagcgcgccggcgtgggcatgaccattgccatgctcgccaacgcggtggccgcggtcgtggagagtcgccgcaagtccgtggccgcggcgagcggcatgctcgacgcgcccaagggtagctcgctgcccatcagcgtcttctggctggtgccgcagtacgccatccacggcgtcgccgacgccttcatggacgtcggccgcatggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctctactggctcaccatgtcgatcggcagctacctcggcacgctgctcgtcaccatcatccacgccaagacgcagcggagcgggcagtggctgcaggacaacctcaaccgagccaagctggacagctactactggctcgtcttcggcttgcaggggctcaacctcatctactacttcgtctgcgtcaggtactacaccttcaagccattggagacggtgaaacctgaggaggagctcgagctctaccgtggaaatggcaacgagggcgatggcaagaaaggaggaaccttgaagtagaatgtgcatttcaatccccttgccggattggaacagaataatatgttcacttttactacatagatggtttatgctttgatctcaccatataaattgccgagattttatgaactctctggcaaatagaagaacgtatttttgtgtgtcatatattcaagaacaagaagtgtatatgcccatgtcctcaaaggattttctctgtttgatcagtgtttacataaacaagtaaaatatcaaggcgagatgtatcaatttatcccggaaaaaaataatttctgatcgtatgccagaaaaatatttgattg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0410900, RefSeq:Os05g0410900