Os05g0414200

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0414200| Description = Disease resistance protein family protein| Version = NM_001062084.1 GI:115463898 GeneID:4338793| Length = 3658 bp| ...")
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Gene Name

Os05g0414200

Description

Disease resistance protein family protein

Version

NM_001062084.1 GI:115463898 GeneID:4338793

Length

3658 bp

Definition

Oryza sativa Japonica Group Os05g0414200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20265598..20269255

Sequence Coding Region

20265918..20267117,20269135..20269221

Expression

GEO Profiles:Os05g0414200

Genome Context

<gbrowseImage1> name=NC_008398:20265598..20269255 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20265598..20269255 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggcggcggggctgaccaagccaggttccggcgagccgagcagcacgctcctaacctcggatggtccggtcaccggctcgattctggaggatggtgaggtgtttgggcgcgacaaggagcgtgagcaattggtgtcttggctaatcggcagcacgcccgaagccgaaggcgaggatcggagcgccgccgccgatgacaccatccccgtcgccgctatcttggggctcggaggcattgggaagacgacgctcgcacgcgtcctgtgccatgatcatgaggtgaaggaggccttcgatctgatcatgtgggtgtgtcccgcaggcaattacagcaagctcgatctcgcgaagcaaatcctgcagtccgcggaactccccgacgacacgaatagcttcgatcggctgcagcggcggctgaaggaggccgtctcgtcgcgccggttcttgctgattcttgacaatgtctggaataaagatgagaatgagaactcgtacagggatatgtgggctgatgtgttagctcccctcagatttggccgagctgggagtaagatcgtggttaccaccaggaagaggattgtggcagacttgctgaatgcgagcaagtttgtttggctgaatgggctggagttcgctgatgtttggttgttgttcaagaagtttgccttcgacaacaatgatgttgacaggcacccggaattgaaggaaattggggagcagattgctgtgaagctcaaggggttgccattggctgccaaggttgtcggtggcatgctaaagcggaaaccaagtttgactgagtggaagaggatcttgaagatggaaatatatgacaatgttagctccacactggagctgtgttatcagaacctgcaggagcacatccaaccatgctttgcgatatgcagcatattcccaaagaactggaggttcaatcgtgacaagttgattaagatttggatggccctgggttttatccagttcaggccagatgatacgaagaatcaattggaggaggatgtagggaaggagtactttaatcaacttgtggcacaatcattcttccatgagcgcaaggaaggccgccgaacttactactacatccacgacctgatgcatgacctggccgacaatgtctctcgaattgactgcgcaagagttgaaagtgtagagtttgagaaaaaagacatacgcatacctgaaatatgtttcgttttttttcctacgttagccggtgcacttcacctgcgcatgttcaaatactgtcttgcttcagtttactga</cdnaseq>

Protein Sequence

<aaseq>MQAAGLTKPGSGEPSSTLLTSDGPVTGSILEDGEVFGRDKEREQ LVSWLIGSTPEAEGEDRSAAADDTIPVAAILGLGGIGKTTLARVLCHDHEVKEAFDLI MWVCPAGNYSKLDLAKQILQSAELPDDTNSFDRLQRRLKEAVSSRRFLLILDNVWNKD ENENSYRDMWADVLAPLRFGRAGSKIVVTTRKRIVADLLNASKFVWLNGLEFADVWLL FKKFAFDNNDVDRHPELKEIGEQIAVKLKGLPLAAKVVGGMLKRKPSLTEWKRILKME IYDNVSSTLELCYQNLQEHIQPCFAICSIFPKNWRFNRDKLIKIWMALGFIQFRPDDT KNQLEEDVGKEYFNQLVAQSFFHERKEGRRTYYYIHDLMHDLADNVSRIDCARVESVE FEKKDIRIPEICFVFFPTLAGALHLRMFKYCLASVY</aaseq>

Gene Sequence

<dnaseqindica>321..1520#3538..3624#agctggaggatgagctcaatcagctccgcgccgaggcgggctgcgtcgagcgctgcctcggcggcggcggcggcgggagaggcaactgtgagctcgtacgctggctgcgccagctcaaggaggtggtgtacgaggccgacgacgtcctcgacgagttcgcctaccggaggctcgcccccaacgacggcaaggtcagcctactagggtcttcttccattggcaagatcggcaagcagctcgttggcaaggacgagtcggtcaataggctcaaggccgtcgtggagaaactgagcagcatccgcgcgaactccggccggctgatgcaggcggcggggctgaccaagccaggttccggcgagccgagcagcacgctcctaacctcggatggtccggtcaccggctcgattctggaggatggtgaggtgtttgggcgcgacaaggagcgtgagcaattggtgtcttggctaatcggcagcacgcccgaagccgaaggcgaggatcggagcgccgccgccgatgacaccatccccgtcgccgctatcttggggctcggaggcattgggaagacgacgctcgcacgcgtcctgtgccatgatcatgaggtgaaggaggccttcgatctgatcatgtgggtgtgtcccgcaggcaattacagcaagctcgatctcgcgaagcaaatcctgcagtccgcggaactccccgacgacacgaatagcttcgatcggctgcagcggcggctgaaggaggccgtctcgtcgcgccggttcttgctgattcttgacaatgtctggaataaagatgagaatgagaactcgtacagggatatgtgggctgatgtgttagctcccctcagatttggccgagctgggagtaagatcgtggttaccaccaggaagaggattgtggcagacttgctgaatgcgagcaagtttgtttggctgaatgggctggagttcgctgatgtttggttgttgttcaagaagtttgccttcgacaacaatgatgttgacaggcacccggaattgaaggaaattggggagcagattgctgtgaagctcaaggggttgccattggctgccaaggttgtcggtggcatgctaaagcggaaaccaagtttgactgagtggaagaggatcttgaagatggaaatatatgacaatgttagctccacactggagctgtgttatcagaacctgcaggagcacatccaaccatgctttgcgatatgcagcatattcccaaagaactggaggttcaatcgtgacaagttgattaagatttggatggccctgggttttatccagttcaggccagatgatacgaagaatcaattggaggaggatgtagggaaggagtactttaatcaacttgtggcacaatcattcttccatgagcgcaaggaaggccgccgaacttactactacatccacgacctgatgcatgacctggccgacaatgtctctcgaattgactgcgcaagagttgaaagtgtagagtttgagaaaaaagacatacgcatacctgatactgtccgtcacttatctgtgaccagtgatgcggtgatgcagctcaaaggtcgggccgagctcaagaggttgcgcacattcattattctcaagcattcctcatcttccgttgttccattgccagatgatgtcctcaaggaattgaaaggtctccgtgtgcttggtttggatggctgtgatatggttgaattatcagataaagttggccagttgatacatctgaggtacctttctctttgcaagacgattacaaagcttccaaaatcagtgacaaaacttttccttcttgagaccctatatatccctaagaggtgtcagcttgaggagtttccaaaagacatgtggaagttgaaatatctccgccatttggatataaacaggacaaacacatcgaaaattgtcggaattggaaaaatgatccatctccagggatcaattgagttccatgttaaaaaggaaaagggtcatacattagaagacttgaacgatatgaatgatctccgaagaaagctccatatcaagaaccttgatgttgtagcaagcaaagaagaggccagcaaagctggattaagcaagaaacagagcataaaggtgctggaattggaatggaactcccctggcaaaagtgtcccttctgtcgatgctgaggtcttagaaggccttaaaccacatccagatgttgaagagattcatattaggagatatcacggtaatacctcaccatgttggttggacaggaaggacataacatttcttaaatatttacatttgaccaactgtagaaagtgggcggtcctgcctcctcttgggcagcttcccttcctcaaagttctgcatttgaaagagatgtgttcattgaaacagattggaagtgagttttatggaaccaatccaactgcatttccatatttggaggaccttgaatttgatgatatgccaaaatgggttgagtggaccaaagaagaagagaagtatgacagcgtgttccccagactccgtaaactgaagcttttgagctgtcccgatttgattaaagtgcctcccttcccgcagtccgtgagaaaggtcagtattgagaatacagggtttgtgtcacacctgaaactatcttcttcttcatcatcaaaagccaacaaagttaaattggaaacatgttctgccgctgtccttaccaatggtttgttccaccagcaacaagtgcaggaaattgttgatttgaccttgaggcactgccaagatgtaaagtttgaagagcttcatgcacttacttccctcaagaggctgcaaatatcttatttagagatgactgacgaggagttgggtacttgtttacaaggtttacaatcgctgaccttactggatatagtccactgcagtaaaataaccactcttccacagattgagaacccgagcaacttgacgaagtttcatgagctaaacattcggcagtgcccccaattgtcttctctgcattcattgcctagttttgccacacttgaaacagtgttgattgaaaattgctccagggtcaccgtagaatctttccctgccaacttcaacagcttaacctctctgagaaaactgagcataatgaactgcactggattggagtccttgccaagtggcttcccatcttcactgcaggttgttcatctgattggttgcaagccaacgttgctgagccaactacaaaataaggatggaccagaatgggataaaatagcttcgatcccaatgaaactgatccactgatcagggttcagacttcagaggctaattttgcaggtgtgtttgataccattagcatatgcacatttcactgtacttgtaagttttaacaatcaatgagatgtatctctgtttcattgtagtgatactggccaattgtgtcaaaatttccggcacgcaagatgaacgataccagacgaaccccaacagatttttctggctggaacaattgtgtactgtctgtaaatgtatgtgctgcatttgtagtgaactggtcacatttcctgaaatatgtttcgttttttttcctacgttagccggtgcacttcacctgcgcatgttcaaatactgtcttgcttcagtttactgagctgtgaacaattgtaatatcggtctaccgtgag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0414200, RefSeq:Os05g0414200