Os05g0414700

From RiceWiki
Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0414700| Description = Protein kinase-like domain containing protein| Version = NM_001062088.1 GI:115463906 GeneID:4338797| Length = 3478 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0414700

Description

Protein kinase-like domain containing protein

Version

NM_001062088.1 GI:115463906 GeneID:4338797

Length

3478 bp

Definition

Oryza sativa Japonica Group Os05g0414700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20290221..20293698

Sequence Coding Region

20290600..20291601,20291730..20292605

Expression

GEO Profiles:Os05g0414700

Genome Context

<gbrowseImage1> name=NC_008398:20290221..20293698 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20290221..20293698 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agtgccatttctcatcgtcaaggagaggtggcattaatccgcagcaagtgctcgatgacagatcattattatgctcctctgaggcttattcttctcttgatattgagtgccacctgttttggctctgaacttgatgttcagtgcttgaaaaccatattccagtcagtgaccgatcccaatggtatactcaaatcctcatggagttttgtcaacaacggcacccctggttacatctgcaaatttactggggtggaatgttggcatccagatgagaaccgagttctttctttgcgtctcggcaaccttggtcttcagggtccatttcctgcaggccttcagaactgtactagtatgactgggctagatctgtcgagtaacaactttacaggactcattcctcaggacatctcccagcaaataccatacttgacatcactggacctctcctacaataggttttcaggccaaatcccagtaaatatttcaaatatgacatatttaaacacactcaatctccaacataaccagttcactggtcaaattccactgcagttcaatcttcttggtcggttaacatcattcaatgttgcagagaaccgactatcagggcctattccaaataatctaaataaatttccgtcatcaaattttgctggtaatcaaggcctttgtgggctaccattggatggctgccaagcttcagcaaagagcaagaacaatgcagcaatcattggagctgttgttggtgttgtagttgtgatcataattggcgtaataatcgtattcttttgtctgcggaaattaccagccaagaagccaaaggtcgaggaagaaaataagtgggcaaagagtatcaaaggaactaaaaccatcaaggtttctatgttcgagaatccagtttcaaagatgaaactaagcgatcttatgaaggctaccaatgaattttgcaaagagaacatcataggtactgggagaacaggaactatgtacagggcagtgctacctgatggttcttttcttgctgtcaaaaggctacaagattctcaacattctgaaactcaattcacgtcggagatgaagacacttggccaagtaaggcatcgcaacttagttcctctcctaggattttgcattgctaagagggagaggttgttggtgtacaagcacatgccgaaaggttcactctatgatcagttaaatcaagaagaaggcaaagactgtaagatggattggactctgaggttaagaatcggcattggtgcagcaaaaggtcttgcgtatcttcatcacacttgcaatcctcgagtccttcaccgcaatataagctccaagtgcatcctcctagatgaggactacgaaccaaagatatcagattttggacttgctaggcttatgaatccaatagacacccaccttagcacctttgttaatggagaatttggagatcttggttatgtggcaccagagtatgcacgtactctggtggccacgccaaagggtgatgtgtacagcttcggtgttgttcttcttgagcttatcaccggcgagaggcctactcatgtttcaactgcaccggagaatttcagagggagcctagtagagtggatcaactacctatcaaacaatgccctcctccaagatgccgttgacaagtcattgatagggaagggcagtgacggcgagctaatgcaatttctgaaagtcgcatgttcttgcacaatttccactccaaaggagagaccgacaatgtttgaggtctatcagctcctcagagccattggagaaaagtaccatttctcggcggaggatgacttgatgatgctgccacctctaagcacagatggagaaacccttgacgagctcattgttgcccagtaa</cdnaseq>

Protein Sequence

<aaseq>SAISHRQGEVALIRSKCSMTDHYYAPLRLILLLILSATCFGSEL DVQCLKTIFQSVTDPNGILKSSWSFVNNGTPGYICKFTGVECWHPDENRVLSLRLGNL GLQGPFPAGLQNCTSMTGLDLSSNNFTGLIPQDISQQIPYLTSLDLSYNRFSGQIPVN ISNMTYLNTLNLQHNQFTGQIPLQFNLLGRLTSFNVAENRLSGPIPNNLNKFPSSNFA GNQGLCGLPLDGCQASAKSKNNAAIIGAVVGVVVVIIIGVIIVFFCLRKLPAKKPKVE EENKWAKSIKGTKTIKVSMFENPVSKMKLSDLMKATNEFCKENIIGTGRTGTMYRAVL PDGSFLAVKRLQDSQHSETQFTSEMKTLGQVRHRNLVPLLGFCIAKRERLLVYKHMPK GSLYDQLNQEEGKDCKMDWTLRLRIGIGAAKGLAYLHHTCNPRVLHRNISSKCILLDE DYEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGVV LLELITGERPTHVSTAPENFRGSLVEWINYLSNNALLQDAVDKSLIGKGSDGELMQFL KVACSCTISTPKERPTMFEVYQLLRAIGEKYHFSAEDDLMMLPPLSTDGETLDELIVA Q</aaseq>

Gene Sequence

<dnaseqindica>2098..3099#1094..1969#gccttctcttttgacggcctgcctcccctcccctccctcctctgccccccgcgtccaagtcttccttctcccaccatcgtcgtaactatctcgttgttcattcgcctcctccgctcctcgtcttcgggtgtgcgggctcccttcctcctgcttcttcaggtgagacgagctctgctttttaattcttgttcttgtgccttggtgtgttcttgtggggctttatttgggggtgtacagtggatatgatcttcgtgagtggttttgcggtttagtgttcttggagcgcaggaggatctcccggacccggaattgttatgcaaggatggagaggtgaatttcgggggtgctggtagagtggtagtacggcgatggaattaggggagaggaattctgttcgtattgctgctgttgttgttgccgatgcgtgggtttcttgaggaggaccaagggttcgtccaggactcatccgcttggggatttttgatgatcatacgcgaatcatttcgagtggcggagaagggcggccggagtgcctgaccacttttggtgcgagatcgaagagaaaagatagtgtttgtttgtttggatggtggtggtgccttcttttgggggatatttttttcctcgttagatttttttcgcaacaaaagtagggcgcctttttgagacacgagagaagccgagatattaaaattagagaccttttgatcgctctaaaatagaattgattgaggcatagaacgatggttttgtgtgttagaacctgcttccagtagacgattctttgttactcgttctcattcatgcatctacttgttcttccttttgcctatcttaataattagaaagtttaccgcttgtgtgatttgctttgtctaaggtggggatcagttctctactgatgtagtgatgttggctgcttacagttgggattctttgatgttgttgttactatcataaattaagtcacaatttccatcgtactaggataattatactgtggcacactaactttcaggctagagcatcgtatgtttacctgtaatttcgtgacatggtgttattgattcttgcaggcgactgctaattttgaagtgccatttctcatcgtcaaggagaggtggcattaatccgcagcaagtgctcgatgacagatcattattatgctcctctgaggcttattcttctcttgatattgagtgccacctgttttggctctgaacttgatgttcagtgcttgaaaaccatattccagtcagtgaccgatcccaatggtatactcaaatcctcatggagttttgtcaacaacggcacccctggttacatctgcaaatttactggggtggaatgttggcatccagatgagaaccgagttctttctttgcgtctcggcaaccttggtcttcagggtccatttcctgcaggccttcagaactgtactagtatgactgggctagatctgtcgagtaacaactttacaggactcattcctcaggacatctcccagcaaataccatacttgacatcactggacctctcctacaataggttttcaggccaaatcccagtaaatatttcaaatatgacatatttaaacacactcaatctccaacataaccagttcactggtcaaattccactgcagttcaatcttcttggtcggttaacatcattcaatgttgcagagaaccgactatcagggcctattccaaataatctaaataaatttccgtcatcaaattttgctggtaatcaaggcctttgtgggctaccattggatggctgccaagcttcagcaaagagcaagaacaatgcagcaatcattggagctgttgttggtgttgtagttgtgatcataattggcgtaataatcgtattcttttgtctgcggaaattaccagccaagaagccaaaggtcgaggaagaaaataagtgggcaaagagtatcaaaggaactaaaaccatcaaggtgaaaataccctactattactatttatttcccttttcttttataatacaaaagaaattttgtgtaacattattcgtaaaagaagctaacgtaaacttcttactgtcatggccttttcaattattcaggtttctatgttcgagaatccagtttcaaagatgaaactaagcgatcttatgaaggctaccaatgaattttgcaaagagaacatcataggtactgggagaacaggaactatgtacagggcagtgctacctgatggttcttttcttgctgtcaaaaggctacaagattctcaacattctgaaactcaattcacgtcggagatgaagacacttggccaagtaaggcatcgcaacttagttcctctcctaggattttgcattgctaagagggagaggttgttggtgtacaagcacatgccgaaaggttcactctatgatcagttaaatcaagaagaaggcaaagactgtaagatggattggactctgaggttaagaatcggcattggtgcagcaaaaggtcttgcgtatcttcatcacacttgcaatcctcgagtccttcaccgcaatataagctccaagtgcatcctcctagatgaggactacgaaccaaagatatcagattttggacttgctaggcttatgaatccaatagacacccaccttagcacctttgttaatggagaatttggagatcttggttatgtggcaccagagtatgcacgtactctggtggccacgccaaagggtgatgtgtacagcttcggtgttgttcttcttgagcttatcaccggcgagaggcctactcatgtttcaactgcaccggagaatttcagagggagcctagtagagtggatcaactacctatcaaacaatgccctcctccaagatgccgttgacaagtcattgatagggaagggcagtgacggcgagctaatgcaatttctgaaagtcgcatgttcttgcacaatttccactccaaaggagagaccgacaatgtttgaggtctatcagctcctcagagccattggagaaaagtaccatttctcggcggaggatgacttgatgatgctgccacctctaagcacagatggagaaacccttgacgagctcattgttgcccagtaactgcaaacccaatgttccacagaaggcaaccaagtggaggttgtttcttctgcgcgtcattaccatgcttagatgagtgaggtggctttacatgatgtactattaagtagtatcagtatactgcatccgctgtataatttttgtagcttgttgttatctaccattgggaggtgctagcagcagcaatgatgatctttcactcaaccgatatggggatggggtattaactactcctaatagtagtttgctcctcatgtgatgggaatatgccatattggcatttattcagtcatttttcatgatgtcatttgtacttacgccacgggatgaggaatactgaacgtcaaaatgtgtggaatgccaccttatgatgtcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0414700, RefSeq:Os05g0414700