Os05g0417200

From RiceWiki
Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0417200| Description = Thioredoxin-like fold domain containing protein| Version = NM_001062096.1 GI:115463922 GeneID:4338807| Length = 1850...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0417200

Description

Thioredoxin-like fold domain containing protein

Version

NM_001062096.1 GI:115463922 GeneID:4338807

Length

1850 bp

Definition

Oryza sativa Japonica Group Os05g0417200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20445154..20447003

Sequence Coding Region

20445390..20446063,20446266..20446347,20446447..20446558,20446658..20446779

Expression

GEO Profiles:Os05g0417200

Genome Context

<gbrowseImage1> name=NC_008398:20445154..20447003 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20445154..20447003 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctgcaaagctgctgctcctcctccgcctccgtgcccgcgacctgttcggcgctttgcctcgcggaagcgacgcgcgccgcgagcctcttcgtgcgcccgcgcgccgccgcgaggaggctcgtgctcgcccgatgcgcgcgggggcgggagggcggcgagtccaaggcggtgcagctggtgctcggcggccgcgcgcgcgacgacgggtccgagtccgagtccagcgacgacgaggacgacgacgagccgatgcagatgacggacgagcagaggaggacgctgcggaggaagatacgggagatgatggaccgggtgcccgagacggcggagatcacggacccggcggagaggaaggccaagatgctggagctgctgaccaagtaccagctcgtggtggaggaggaggacccgaactggccggaggacgatgaggacggccatgggttcagcctcggccagttcttcgacaagatcaccatcaaggccgagaagaagaatgatgatgatgaggaggacgatgctaaggggaatcagagtgacaaggagatagtttgggaggacgacaactacatcaagccaatcagggatgtcaagaccatggactgggatgacaccgtcttcacggacttcggtcctttgattgtgcttgttcataaccgatacaaaagaccgcaggacaatgaaaatgcaagggatcaactagttaaggcaattgagatgttttgggaatacaatctgccttcacccaggtgcgtggctgtagatgcctgtgcagaacctgaccttgtgaaggccctgaatgtttctggtttcccagaggtcctcttcactaatgcagggaagatagttcaccgtgacaaagtcgtccgatcggctgaggaatggacaagaatgatggcattcttctactataaagcagcaaggccgccttgcttgagcgaggcagatggtcagggtcaagaaaaggtccccctgatgtcataa</cdnaseq>

Protein Sequence

<aaseq>MALQSCCSSSASVPATCSALCLAEATRAASLFVRPRAAARRLVL ARCARGREGGESKAVQLVLGGRARDDGSESESSDDEDDDEPMQMTDEQRRTLRRKIRE MMDRVPETAEITDPAERKAKMLELLTKYQLVVEEEDPNWPEDDEDGHGFSLGQFFDKI TIKAEKKNDDDEEDDAKGNQSDKEIVWEDDNYIKPIRDVKTMDWDDTVFTDFGPLIVL VHNRYKRPQDNENARDQLVKAIEMFWEYNLPSPRCVAVDACAEPDLVKALNVSGFPEV LFTNAGKIVHRDKVVRSAEEWTRMMAFFYYKAARPPCLSEADGQGQEKVPLMS</aaseq>

Gene Sequence

<dnaseqindica>237..910#1113..1194#1294..1405#1505..1626#agattaggctctccgcctgccgcgccgcgagctcccagagaatcaccggcgcattccgctgcgattcttgctgcagcagcggccgcggcggcggcggccacctcgtgaaggcttgaagcccaccggggaaggggagggagggagcccaccggggaaggggagggagggagagagggagagagagagagagagagagagggagagagagagagaggctgcgggcttctcgcggcgggatggcgctgcaaagctgctgctcctcctccgcctccgtgcccgcgacctgttcggcgctttgcctcgcggaagcgacgcgcgccgcgagcctcttcgtgcgcccgcgcgccgccgcgaggaggctcgtgctcgcccgatgcgcgcgggggcgggagggcggcgagtccaaggcggtgcagctggtgctcggcggccgcgcgcgcgacgacgggtccgagtccgagtccagcgacgacgaggacgacgacgagccgatgcagatgacggacgagcagaggaggacgctgcggaggaagatacgggagatgatggaccgggtgcccgagacggcggagatcacggacccggcggagaggaaggccaagatgctggagctgctgaccaagtaccagctcgtggtggaggaggaggacccgaactggccggaggacgatgaggacggccatgggttcagcctcggccagttcttcgacaagatcaccatcaaggccgagaagaagaatgatgatgatgaggaggacgatgctaaggggaatcagagtgacaaggagatagtttgggaggacgacaactacatcaagccaatcagggatgtcaagaccatggactgggatgacaccgtcttcacggacttcggtcctttgattgtgcttgttcataaccgatacaaaaggtataattcattgctcctacttgagtactcctgctgttaagctaaacttgtggatatatgctgtataccatattcccatgatatctaggaactccataatagttctattttgagcatccttttggttgaagaatatcttgtaaagtttaataaatttgtcgtcaaatattagttaagcaaatcacgaatgtttcctttgtagaccgcaggacaatgaaaatgcaagggatcaactagttaaggcaattgagatgttttgggaatacaatctgccttcacccagggtactatttcgatgaactttcttttaccatttataaacctcataacagttgccttgtcgcttctgagagcactgttgactgttttcgtatcatcttcagtgcgtggctgtagatgcctgtgcagaacctgaccttgtgaaggccctgaatgtttctggtttcccagaggtcctcttcactaatgcagggaagatagttcaccgtgacaaaggtatttgtatgagcataggagcataatgctatgttgttttaaaccctcagttgaccaattgcctcatgaggttttctcaattttgttctcccttgttagtcgtccgatcggctgaggaatggacaagaatgatggcattcttctactataaagcagcaaggccgccttgcttgagcgaggcagatggtcagggtcaagaaaaggtccccctgatgtcataagaacagtgtgtaggcgtagcttgtagttgtattttacatcagtgtgcattgttagaaacttagagtttaaatcagttcacatttcttagctttttaaatgtcgtaacacaggcatctattagcatctactagtgaattgccatctttatctgttaatggcatagaatagatatatccaaactgcaacaagattatgttcatgtgctgtaggattatggtttatg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0417200, RefSeq:Os05g0417200