Os05g0417300

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0417300| Description = Conserved hypothetical protein| Version = NM_001062097.1 GI:115463924 GeneID:4338808| Length = 3343 bp| Definition ...")
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Gene Name

Os05g0417300

Description

Conserved hypothetical protein

Version

NM_001062097.1 GI:115463924 GeneID:4338808

Length

3343 bp

Definition

Oryza sativa Japonica Group Os05g0417300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20449544..20452886

Sequence Coding Region

20449715..20449780,20450165..20450257,20451175..20451388,20451612..20451688,20452123..20452233
,20452339..20452500

Expression

GEO Profiles:Os05g0417300

Genome Context

<gbrowseImage1> name=NC_008398:20449544..20452886 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20449544..20452886 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattcgtctcggcccaggagggatcccatcaagtcccgccgccgtcccgactggagagaggagcttaggagcaattgtctgaaaagaattaaagaggagagagtccagtttctttggaagaaaaggatcgatgggccacttcctgctagtgacatgataaaagtcgaatctgcagtcagggatattatctctgatgaattacagaaactcaaacagcatggagatggaaaagcggaggaagaagctgatatgatatgggaatatcaaggaccacagacagctaaacctgttgagactgaaagtgaagatatattacttgaaatggaaagacttctttatgaagatatgagagatgaagccattcagatagaagtggaggccctcgatgaggaagatgaatacttagctcaggcttttcttgaacatatgcagttaactgataaggaggcaaatgctaagctctggtgcccagtttgcaaacaaggggaactacgagaaacacataatctcgtatattgtaccatgtgtaagctacgcctagaccttggagaagataagattaacctggaattcttgcgagaaagattggctaatgtgcatatggatcacttggatagaggatgcaaatcagcacccaagttctgtttgcagactatgtttgagttgactgcgctctacatacaatgcgaagaatgtaacacttttgatgtcgtgatataa</cdnaseq>

Protein Sequence

<aaseq>MDSSRPRRDPIKSRRRPDWREELRSNCLKRIKEERVQFLWKKRI DGPLPASDMIKVESAVRDIISDELQKLKQHGDGKAEEEADMIWEYQGPQTAKPVETES EDILLEMERLLYEDMRDEAIQIEVEALDEEDEYLAQAFLEHMQLTDKEANAKLWCPVC KQGELRETHNLVYCTMCKLRLDLGEDKINLEFLRERLANVHMDHLDRGCKSAPKFCLQ TMFELTALYIQCEECNTFDVVI</aaseq>

Gene Sequence

<dnaseqindica>172..237#622..714#1632..1845#2069..2145#2580..2690#2796..2957#aaaataaatcctcctaccaccttcctgacgaaggcaacgcccgcacgagtcgctcaccgcgcgcgaaccttcctcggactcggggcgtctgtcccctgccgccggcgattcgatcgcgcgggcggggctgtcgcgtctcgccgccgccgccgcagctaagccagcgcggcgatggattcgtctcggcccaggagggatcccatcaagtcccgccgccgtcccgactggagagaggaggtctttctttcgttccttcccccctcccgaaccccccatctccgccgtcgccgtagcttagcgttaacgtagcgtagcgcggttctaggtcgacatgcccctgcgcgggcgagcgctagagggcgggcgtgaatgttagcgctgttggattgtccgtcgacgtgcgcgcaatgtgttcggtcgattgcctgagcgagctggtgcccccctagagttgagctaccaaaatttatcttctgctattttgttgctaatattcaccatgctaggagtaggatttatggggacattgcagtgttcggatgagttctctgttgattgttgtgtttcctttttactcgatttgtctgtaacttgtgcttactcccattttgctgcacacagcttaggagcaattgtctgaaaagaattaaagaggagagagtccagtttctttggaagaaaaggatcgatgggccacttcctgctagtgacatggtatcgaaatttattactcttttcgtcaaccttttgtacagtttcataccgtctatgcaccaatatatagtaaataatggctacattctctactgtttgttgatggaagttctcactgtagtttaatgcttttaaaggacaaacaccagataaatcagtccttctgtctgatactagtcctgaataattacagtatgtttcttcttgcagctggcaagtgaatcatgtactttaatgttacctatcattgctctcgtaatctttcttatcaatccgaggagagataccaacggcctcatcttttcgcttatgcttatgcttatcaatcaaaatttgaattttcaaccttaaatttgaagccgattttgagttttttttcatcgaagtttatttttcagcctttgcttttagatcactaaggacacgtatataaaatttttattcacaaattacttttcgtttgcaaatacgccgtttggcttattccgcagataagccaaatgatggggctgcaagttaattggttctaatttgacattcaggcttaacagcacttcattgctatggaaatgaaaatgtaaaggattcaaaatttattattgatcaactactggttgcatacaaaactaatgattgaataaccaaaatgaattgaaaaataattattggttctggacttctcgttctatgtgttcccatcatctctgtagactttacagatcgtgttgaaaaataggtaccattaagatgaccattattatggaactggatacattatcactatccttagtcgaaaaacgtggttcattaataggttataccatgagtactctgcagtcttcatgctaacatgatttgtagttgaatatatttatgtattttgtgcatctgatttatctacttatgtcgactgacagataaaagtcgaatctgcagtcagggatattatctctgatgaattacagaaactcaaacagcatggagatggaaaagcggaggaagaagctgatatgatatgggaatatcaaggaccacagacagctaaacctgttgagactgaaagtgaagatatattacttgaaatggaaagacttctttatgaagatatgagagatgaagccattcagataggtacattttcaaaatgtttttttattgctacagtgctcaagaactgttcttgcaatctgctttgttcatgttttctctggagtttttacaaatttatatctaattccttacaactcaatagataatattctctgattcatctcacatggatgctcaaaatttcattttatcttgtagatgaaaataaattggtttggttaaaaacatttcctatttattgtagaagtggaggccctcgatgaggaagatgaatacttagctcaggcttttcttgaacatatgcagttaactgataaggaggtatgcattcattgagcatttagttcaacagttcgctggtctgtaagtttttcaattatataatttgatgctgtatatttctctgacataattactctctgtgcttgactttgtcttagctcaagccattacttcttctttgaagtgcatgctagagctacatttcctatatgatctgtacctatttgtgtaattttataattgaaaatgcaaatggtttagtgttgatggtaggatctgacaagaaacacctcaattagtgtttccatggaggaacagaaaaatttcccagtcaaaacatggtattagaataggttgggttctgttgtttggtcgcaaatgcagcactgctggcgatgtcaatcatatgtattattattctttcctattgtctttccccccttccattttgaaataattgtgctatatatcaggcaaatgctaagctctggtgcccagtttgcaaacaaggggaactacgagaaacacataatctcgtatattgtaccatgtgtaagctacgcctagaccttggagaagataaggtagttcctgttggcaactttgtatgtcttcctgatacattgagatggttttactttttcataacattattgtaccaaattttacaactttaactgttcgatcagattaacctggaattcttgcgagaaagattggctaatgtgcatatggatcacttggatagaggatgcaaatcagcacccaagttctgtttgcagactatgtttgagttgactgcgctctacatacaatgcgaagaatgtaacacttttgatgtcgtgatataaatagctacaatgctgatgaagaccatattacggagagaagggaggatgtccatactttcagaagttctttctccccgtttactgttagatcaacggcgaacttatccttggaagaggatgtacatcaactaggtagggctctgtccactttttgcgttgaggtgatcaaactgtgactcttccatgtatctcttttttgtttgatgtctttcttcacgtaaaggtagagtgcagtgtaattaaccagatgagcttggtcaatattttgttgccaacttacatgaaagtcagtgaactcgctgaaccgatatggatatgggctagattatccgtatcctatgatgctgtgagttcaatatggttttatggattttcttattcctttg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0417300, RefSeq:Os05g0417300